Solanum lycopersicum mRNA Solyc11g065820.1.1

mRNA details  
Name
Solyc11g065820.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g065820.1.1
Length
1,533
  
Description
Mate efflux family protein (AHRD V1 **-- D7KHQ9_ARALY); contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE
Location(s)
SL2.50ch11:51388297..51392625
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
4329
Nb exon
13
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g065820.1.1 Mate efflux family protein (AHRD V1 **-- D7KHQ9_ARALY); contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE

ATGGCAGAGAAGGAAGTTCCATTCTGCATTTTCTTTAGGGAAGCAAGATCAGTATTTAAACTGGATGAGTTAGGCCGCGAGATTGCAAGAATCGCGCTCCCTGCTGCACTAGCTTTAACAGCAGATCCTATTGCATCTCTGGTTGATACAGCATTCATTGGCCAAATAGGTCCTGTTGAGCTTGCTGCTGTGGGAATTTCGATTGCTGTTTTCAACCAAGCATCGAGGATTGCAATATTTCCGCTTGTCAGTGTCACTACCTCTTTTGTTGCTGAGGAGGATACCATCACAAAAGTAAGTTCCATGCCACGAGACAACGAAATCCAGGACATACAATCACAAGATGTTGAAGGATTGGATACAGAGTCGCAATCTAACAGTGAAAACAAAGAGTTAATACCTCAAAACAGGAGTGTGTACAAGTCCGAAACGACAGCTACATCCTTTGAAGTTGTGAAGCCAAAGCCCGAAAAGAGGCACATTCCATCTGCATCGTCTGCATTGATCATCGGTGCCATCCTTGGCTTCATCCAAGCTGCCTTTCTAATTTCCGGAGCAAAGCCTATATTAAGCTTCATGGGAGTCAAACATGGATCACCAATGCTAAAACCAGCTCAAGAGTACCTAAAATTGAGGTCACTCGGTGCACCAGCAGTTCTTCTCTCATTAGCCATGCAAGGAGTTTTTCGAGGATTTAAAGATACGAAAACTCCACTCTTTGCAACTGTGGCTGGAGACTTGACAAACATAATTTTGGACCCCATATTCATTTTTGCGTTCCATATGGGTGTCAGAGGTGCTGCAATTGCTCATGTAATTTCACAGTACCTAATTTCAGCAATACTTTTTTGGAGATTGATGGAAAAAGTTGATCTCTTACCTCCTAGTCTAAAGTATATGCAATTTTCTCGGTTTCTCACAAATGGATTTCTATTGTTAATGAGGGTCATAGCAGTGACGTTCTGTGTAACGTTAGCTGCATCATTAGCTGCAAGGTTAGGACCCACAGAAATGGCTGCATTTCAGGTCTGCTTGCAGGTTTGGTTGACTGTATCTCTTCTGGCTGATGGTTTGGCTGTTGCAGGTCAGGCCATATTAGCAAGTGCATTTGCTCAAAACGACTACAATAGGGCTACTGCTACAGCATCAAGAGTGTTGCAGCTGGGATTAGTTCTAGGATTGGTGTTAGCAGTTATCCTTGGAGTTGGTTTACATTTTGGAGCTAGATTATTTACAGAAGACGTCAACGTCATCCACCTGATTGGCATTGGCATGCCGTTTGTCGCGGCAACACAACCTATCAATGCCCTGGCCTTCGTCTTTGATGGCGTAAACTTTGGTGCTTCTGACTTTGCATATTCTGCCTACTCAATGGTAACAGTGGCTTTATTCAGCATTCTGTTCTTATTCATTCTTTCATCAAGTTATAAATTCGTCGGAATTTGGGTGGCTCTAACCATCTATATGAGTCTCAGAGCTTTAGCAGGCTTCTGGAGGATAGGAACTAGAACAGGGCCATGGAAGTTTCTCTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g065820.1.1SL2.50ch11:51388296..51392625511-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g065820.1SL2.50ch11:51388297..513926254,329-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g065820.1.1.1SL2.50ch11:51392579..5139262547-n/a
exonexon:Solyc11g065820.1.1.10SL2.50ch11:51389052..51389168117-n/a
exonexon:Solyc11g065820.1.1.11SL2.50ch11:51388858..5138895396-n/a
exonexon:Solyc11g065820.1.1.12SL2.50ch11:51388550..51388671122-n/a
exonexon:Solyc11g065820.1.1.13SL2.50ch11:51388297..5138833337-1
exonexon:Solyc11g065820.1.1.2SL2.50ch11:51391685..51391806122-1
exonexon:Solyc11g065820.1.1.3SL2.50ch11:51391291..51391530240-2
exonexon:Solyc11g065820.1.1.4SL2.50ch11:51390996..51391177182-2
exonexon:Solyc11g065820.1.1.5SL2.50ch11:51390758..51390893136-n/a
exonexon:Solyc11g065820.1.1.6SL2.50ch11:51390570..5139066697-2
exonexon:Solyc11g065820.1.1.7SL2.50ch11:51390372..51390472101-1
exonexon:Solyc11g065820.1.1.8SL2.50ch11:51389864..51390027164-2
exonexon:Solyc11g065820.1.1.9SL2.50ch11:51389257..5138932872-n/a
intronintron:Solyc11g065820.1.1.10SL2.50ch11:51389169..51389256n/a-n/a
intronintron:Solyc11g065820.1.1.11SL2.50ch11:51388954..51389051n/a-n/a
intronintron:Solyc11g065820.1.1.12SL2.50ch11:51388672..51388857n/a-n/a
intronintron:Solyc11g065820.1.1.13SL2.50ch11:51388334..51388549n/a-n/a
intronintron:Solyc11g065820.1.1.2SL2.50ch11:51391807..51392578n/a-n/a
intronintron:Solyc11g065820.1.1.3SL2.50ch11:51391531..51391684n/a-n/a
intronintron:Solyc11g065820.1.1.4SL2.50ch11:51391178..51391290n/a-n/a
intronintron:Solyc11g065820.1.1.5SL2.50ch11:51390894..51390995n/a-n/a
intronintron:Solyc11g065820.1.1.6SL2.50ch11:51390667..51390757n/a-n/a
intronintron:Solyc11g065820.1.1.7SL2.50ch11:51390473..51390569n/a-n/a
intronintron:Solyc11g065820.1.1.8SL2.50ch11:51390028..51390371n/a-n/a
intronintron:Solyc11g065820.1.1.9SL2.50ch11:51389329..51389863n/a-n/a
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