Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Solanum lycopersicum mRNA Solyc10g086520.1.1

mRNA details  
Name
Solyc10g086520.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g086520.1.1
Length
636
  
Description
Expansin-1 (AHRD V1 ***- Q6RX69_PETHY); contains Interpro domain(s) IPR002963 Expansin
Location(s)
SL2.50ch10:65310504..65311884
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005576
  • GO:0009664
Length
1381
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g086520.1.1 Expansin-1 (AHRD V1 ***- Q6RX69_PETHY); contains Interpro domain(s) IPR002963 Expansin

ATGGGTGGTGCATGTGGTTATGGGAATCTGTACAGCCAAGGGTACGGAGTAAACAACGCGGCATTGAGTACGGCACTTTTCAACAATGGTCTGAGCTGCGGCGCTTGCTTCGAGATAAAGTGTACTGACAGTAAGAAGGAATATTGCAACCCTGGAAACCCTTCCATCTTGGTAACAGGAACCAATTTCTGCCCACCAAACTACGCCTTGCCTAACGATAATGGAGGCTGGTGTAACCCACCTCGCCCACATTTCGACCTCGCCATGCCCATGTTCCTCAAAATTGCTGTGTACCGTGCTGGAATTGTTGCTGTCAACTACCGAAGGGTTCCATGCAGGAAACAAGGAGGAATCAGATTCACAGTCAACGGTTTCCAATACTTTAACTTAGTGTTAGTCACCAACGTTGCAGGTGCAGGGGACATTCAAAAGGTTTATGTTAAAGGCACAAACACGCCATGGATTTCAATGACTCGTAATTGGGGTCAGAATTGGCAAACAAATGCAAAACTAGTCGGACAAGCACTTTCTTTTAGAGTCACTGCTAGTGATCGACGCAGCTCTGCTTCCTACAACATTGCACCAGCTAACTGGCAATTTGGACAAACTTTCCAGGGAAAGAATTTCCGCGTTTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g086520.1.1SL2.50ch10:65310503..65311884212-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g086520.1SL2.50ch10:65310504..653118841,381-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g086520.1.1.1SL2.50ch10:65311881..653118844-n/a
exonexon:Solyc10g086520.1.1.2SL2.50ch10:65311280..65311601322-2
exonexon:Solyc10g086520.1.1.3SL2.50ch10:65310504..65310813310-1
intronintron:Solyc10g086520.1.1.2SL2.50ch10:65311602..65311880n/a-n/a
intronintron:Solyc10g086520.1.1.3SL2.50ch10:65310814..65311279n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17966402%2Fdetails feature 17966402
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)