Sol Genomics Network

Solanum lycopersicum gene Solyc10g086060.1

Name Solyc10g086060.1	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc10g086060	Length 2,142

Description

IQ-domain 10 (Fragment) (AHRD V1 *--- D7L3Y4_ARALY); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region

Location(s)

SL2.50ch10:65024279..65026420

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2142

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc10g086060.1.1	SL2.50ch10:65024279..65026420	1,416	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc10g086060.1 SL2.50ch10:65026420..65024279 (sequence from reverse strand)
ATGGGGAAGAAAGGAAACTGGTTTTCTTCGGTAAAGAAGGCACTAAGCCCAGATCCTAAGGTGAGAACATGGAGAAGGTTTCGTGGAATAGCTGTATCGAGCTTTTCTAGTATGCTGTAATGTTTTTTTCATAATTGAACTGTGACTAAGCATTCTTGAGCTGAATTTCAGAAATCAAAGAAGAAATGGTATGGAAAAGAGAAGGATCCAGTTCCAGATTCTTTCTCCCCAGTTGCTGCCTCAGTATCTCCTCCTCATCCTGTTCCTCATGTGGAAGAGGTTGCACTGGATGAAGTGGAAGAGGAGCTGACAAAACATGCATACTCCGTTGCAGCTTCCACTTCTGCAGCTGCTGAAGTTGATGTTTCAGCCACCGAGGCTGCTGAAGAGGTTGTTTGGTTAGATAAAGTGACTCAGTATACTGGCAAATCAAAGGAGGAAGTAGCCGCCATCAAGATTCAGACTGCATTTAGAGGATATCTGGTATGCTTCTGTACATTCTTATATTCGTTTTGTTCTAAACGAATTTCCCATACGTGGCAGCATTTCTTTCCAGCTAGGTTACCATAAGCTTGATACTTTTCCTTATTAGATCAGTAAAGCTAGTAATATTTGTTTGATACTGAAAAGGAATTTGCTATTGACATTTATCAAGTGCAGGCTAGGAGGGCATTGAAGGCTTTAAGAGGGCTAGTTCGACTCAAATCACTTGCTGATGGACCTACAGGGAAACGGCAAACTGCACATACTCTAAAATGCATGCAAACGCTGTCTCGCGTGCAGTCTCAGATTAGTTCTAGAAGGATTAGGATGTTGGAAGAGAATCGAGCTCTCCAGAGGCAGCTTATGCAGAAACATGCAAAAGAACTTGAGAGTTTGAGGGTCAGTATTCTTCGGTTATTCCACCTTTTTTTTTTCTGAAAGAAGGAATCTGCACCAATATAATGCTTCGAAATGGATTTTGTTTCTTTGGCTGCTTTGTTCTTTCTCTAATAGAATTTTTTGTCTGTTTTGACAGAGAGGAGAGGAATGGGATGACAGTGCGCAATCAAAAGAGCAGATTGAAGCAAGCGTGCTCAGCAAATATGAAGCTGCTGTGAGACGAGAAAGAGCACTGGCTTATTCATATTCACATCAGGTAATTAATTAGCTTATCTTTTCTTCTATACAAAAGAATTAGTATTTAGAAAGAGCACAGTCGATGCATATGTGTATGTATATGACCTCCCGGAAACATGTGTATGACCTCTCTCATTTCTATCATCAAAACTTTGTGATGACATGATCACAGGTCTCATATCTTTTTGTTTTCCCTATAAAACATATATAATGCATTTACTTCAGCAGAATGACTCTTTAACATATGTTTATAACTTATAATTTCATAGCAAGTTGGAAGATATTTTTATAATGCTTGTGACAAAAAACTTGTCTGGACAGAAAACCTGGAAGAAGTCACCAAGATCTGCCAACTTGTTGTTTATGGATCCAACCAATCCTCAGTGGGGTTGGAGCTGGTTAGATCGCTGGATGGGCGCTAAACCTTGGGATACCCAAAGCATGTCAGAGAAGGAACACAAAAATGATCAAATGTCTGTTCGAAGTGCCAGTATTGCTGGAGGAGAAATTACCAAGGCATTTGCCCGGTATCAGCTGAACTCTGATCTCCCTTCTCCATCCAGCCAAAAACCAAGTCACCAATCTCCTACAACCCCTTCCAAGCCAGCCAATTCAACAGCATCCAGAAAATTGAAATCGGCAAGGGTAGCTGCAATAAGCCAAGATGATGATGCGCGAAGCATGATCAGTATGCAATCAGAACGTAACAACAGGAGGCATAGCATTGGGGTAGCATCTATAAGAGATGATGAGAGTTTGGGAAGCTCCTCCTCTGTACCGAGCTACATGATACCTACTAAGTCAGCAAAAGCAAAAACACGTTTGCAAAATCCTCTAGGCATGGAGAATAATAGTACCCCAGAAAAGGGACCAGCAGGGTCTGTCAAGAAGCGACTCTCTTACCCGCCTTCACCTGCTAGACCAAGGCGGCATTCAGGTCCACCAAAGCTGGAGAATACCTCCATGAACACCTCTATCAACACATCCATTGCCAAGGACAACGTCAAAGAGGTCATCAACTAA

Download sequence region

Download sequence (2.1Kb)

Get flanking sequences on SL2.50ch10

mRNA Solyc10g086060.1.1

Ontology terms

None

terms associated with this mRNA

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc10g086060.1.1	SL2.50ch10:65024278..65026420	472	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc10g086060.1	SL2.50ch10:65024279..65026420	2,142	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc10g086060.1.1.1	SL2.50ch10:65026361..65026420	60	-	n/a
exon	exon:Solyc10g086060.1.1.2	SL2.50ch10:65025938..65026249	312	-	n/a
exon	exon:Solyc10g086060.1.1.3	SL2.50ch10:65025539..65025760	222	-	n/a
exon	exon:Solyc10g086060.1.1.4	SL2.50ch10:65025283..65025402	120	-	n/a
exon	exon:Solyc10g086060.1.1.5	SL2.50ch10:65024279..65024980	702	-	n/a
intron	intron:Solyc10g086060.1.1.2	SL2.50ch10:65026250..65026360	n/a	-	n/a
intron	intron:Solyc10g086060.1.1.3	SL2.50ch10:65025761..65025937	n/a	-	n/a
intron	intron:Solyc10g086060.1.1.4	SL2.50ch10:65025403..65025538	n/a	-	n/a
intron	intron:Solyc10g086060.1.1.5	SL2.50ch10:65024981..65025282	n/a	-	n/a

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Related views

Genetic loci

Tomato locus SlSUN30 (SUN-like protein 30)

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17965978%2Fdetails feature 17965978

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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