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Solanum lycopersicum mRNA Solyc10g085790.1.1

mRNA details  
Name
Solyc10g085790.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g085790.1.1
Length
1,527
  
Description
Atp-dependent RNA helicase (AHRD V1 ***- B8BXP3_THAPS); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch10:64871075..64876079
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
5005
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g085790.1.1 Atp-dependent RNA helicase (AHRD V1 ***- B8BXP3_THAPS); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGGCCGACACTTCTAGTACCTCCGGTATCACCAGTAGCACCGCCGCTTCTACGACGGCAAACCCACCGGAATCCAAAAGTTGGGCAGACCAAGTCGACGAGATCGATCAAGCTGAGCAGTCGGCAGACCAAGCTGAGCAGTCTTCCGCTTCGAACGAAGAAGGCGCTACTGCCGAGATAAATATCGGATCTTTACAAGTCGATGAGTCCAAAAGAGAAAACTCCACTCTCTCTGAGCCGGAAGATTCAAGCATACAAGCGGTTACATCTGGCGATACTATGTACAAATCAGCGAAGAGATTTGAGGATTTGAACTTATCTCCTGAGCTATTGAAGGGATTATATGTACAAATGCAGTTTGAGCGTCCTAGCAAGATTCAGGAAATTAGTTTGCCTATGATTCTTACGCCTCCCTACAAGAATCTTATTGCTCAGGCTCATAATGGTTCTGGTAAAACTACTTGCTTTGTGCTTGGGATGTTGAGTCGGATTGATCCAAAGCTTGCTGCCCCTCAAGCTCTCTGTATCTGTCCAACCAGAGAATTGGCTATTCAGAATATGGAAGTGCTATTGAAGATGGGGAAGTTCACTGGCATAACATCAGAGTTAGGTATCCCAGCAGATTCTGCCAACTATATTCCAATTTCGAAACGGCCGCCTGTCACGGCACAAGTAGTGATTGGCACACCTGGGACTATAAACAAGTGGGTGACGGCAAGGAAACTGGGCATGAGTTGTATGAAAATTCTTGTGTTTGATGAAGCGGACCACATGTTGGCAGAGAGTGGTTTTCAGGATGATTCCATAAGAATAATGAAGGCAATCGTTAAAGCCAGCGCTAACTGCCAGGTGCTTCTGTTTTCTGCAACGTTTGGGGAAAATGTCAAAGCATTTGTGACAAAAATTGTTCAAGATCTTTTTGTGCAAGATTACAATCAAATGTTTGTGAAGAAAGAAGAACTTTCACTGGATTCAGTGAAGCAGTATAAAGTGCAGTGTCCGGACGAACTTTCAAAAATCATGGTGATTAAAGACAGAATACTAGAACTAGGACAGAAGGTGGGGCAAACAATTATATTTGTTCGTACCAGAAACAGTGCAAGTATGTTGCATAAGTCATTGGTTGACTATGGCTATGAAGTGACAACAATTCAAGGTGCTCTTAGGCAAGAAGACAGAGACAAAATAATCAAGGAGTTCAAAGATGGATTGACACAAATTCTTATATCAACTGATCTTCTTGCTCGTGGATTTGACCAATCACAGGTTAATTTGGTGGTTAATTATGACCTCCCTGTGAGACACGAGAGTCCAACAGAGCCAGATCATGAGGTATACCTGCATCGGATTGGTAGAGCAGGACGTTTTGGACGCAAGGGTGCGATATTCAACTTGCTGTGCAGTGACAGAGACAACATGCTAATGTCAAAGATTGAGAACCATTTCAACCATCAAGTGGCTGAGATTCCCTCATGGAGTAATGAAGAAGATTTCGAAAATGCTCTGAAGATAGCTGGCTTGCTGTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g085790.1.1SL2.50ch10:64871074..64876079509+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g085790.1SL2.50ch10:64871075..648760795,005+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g085790.1.1.1SL2.50ch10:64871075..64871335261+n/a
exonexon:Solyc10g085790.1.1.2SL2.50ch10:64871461..64871754294+n/a
exonexon:Solyc10g085790.1.1.3SL2.50ch10:64872595..64872822228+n/a
exonexon:Solyc10g085790.1.1.4SL2.50ch10:64873120..6487318566+n/a
exonexon:Solyc10g085790.1.1.5SL2.50ch10:64874579..64874995417+n/a
exonexon:Solyc10g085790.1.1.6SL2.50ch10:64875174..64875285112+n/a
exonexon:Solyc10g085790.1.1.7SL2.50ch10:64875398..6487548386+2
exonexon:Solyc10g085790.1.1.8SL2.50ch10:64876017..6487607963+n/a
intronintron:Solyc10g085790.1.1.1SL2.50ch10:64871336..64871460n/a+n/a
intronintron:Solyc10g085790.1.1.2SL2.50ch10:64871755..64872594n/a+n/a
intronintron:Solyc10g085790.1.1.3SL2.50ch10:64872823..64873119n/a+n/a
intronintron:Solyc10g085790.1.1.4SL2.50ch10:64873186..64874578n/a+n/a
intronintron:Solyc10g085790.1.1.5SL2.50ch10:64874996..64875173n/a+n/a
intronintron:Solyc10g085790.1.1.6SL2.50ch10:64875286..64875397n/a+n/a
intronintron:Solyc10g085790.1.1.7SL2.50ch10:64875484..64876016n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17965754%2Fdetails feature 17965754
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