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Solanum lycopersicum mRNA Solyc10g084280.1.1

mRNA details  
Name
Solyc10g084280.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g084280.1.1
Length
1,437
  
Description
Calmodulin-binding protein (AHRD V1 *--* C5HYF8_BRARP); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region
Location(s)
SL2.50ch10:63899140..63901714
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
2575
Nb exon
5
Sifter term
GO:0005516
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g084280.1.1 Calmodulin-binding protein (AHRD V1 *--* C5HYF8_BRARP); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region

ATGGGGAAGAAAGGAAGCTGGTTTTCTTCAGTAAAGAAGGCTTTGAGCCCAAACTCTAAGGAGAAGAAAGATGGTAAATCAAAGAAGAAATGGTTTGGGAAAGAAAAACAGCCACTCCCAGATTCTTCAACTTTGGTGGTTGCCTCAGTGTCTCCTCCGCAACCTATTCCTCAAGTGGAAGAGGTCAAACTGGCTGAAGTGGAAGAAGAACAGACTAAACATGTGTATTCCGTTGCAGTTGCTACAGCTGCAGCAGCCGAAGCGGCTGTTGCAGCTGCCCAGGCTGCTGCAGAGGTTGTTAGATTAACTACGGTCAATCAATTCCCAGGAAAATCCAAGGAGGAAATAGCTGCAATCAGGATTCAGACGACATTTCGAGGATATCTGGCCAGAAGAGCATTGAGAGCTTTAAGAGGACTTGTCAGACTCAAAACATTAGTTGATGGACCTACTGTCAAACGGCAAACTGCAAATACTCTGAAATGCATGCAGACTTTATCTCGTGCGCAGTCTCAGATTAGTTCTAGAAGGAGCAGGTTGTTGGAAGAGAACAGAACTCTCCAGAGGCAGCTTATGCAGAAACATGCAAAAGAACTTGAGAGTTTGAGGAGAGGGGAGGAGTGGGATGATACTCTACAATCAAAAGAGCAAATTGAAGCAAGTTTGCTCGGCAGATATGAAGCTGCAATGAGACGAGAAAGAGCACTCGCGTATTCATATTCCCACCAGCAAACCTGGAAGAAGTCATCAAAAGCTACCAATTTGTTATTTATGGATCCAACCAATCCTCAATGGGGTTGGAGTTGGTTAGAGCGGTGGATGGGTGCTAGGTCTAGGGAAAACCAAAACATGTCCGAGAAAGAACTAAAAGGTGATCAAATGTCCGTAAGAAGTGCCAGCATGAGCATGTCTGGAGGGGAAATTACCAAGGCATTTGCCCGTCATCAGCTGAACTCTGAACTCCCATCTTCTCCTTTAAGCCAAAAACCAAACCGTCCTTCAAGCCGCCAGTCTCCTACTACACCTTCCAAGCCATCCACAGCTAGAAAACCGAAACCAGGAAGTGCAAGAGTCAGTGCAATAAACCAAGAAGATGACACACGAAGCGTATTTAGCGTTCAATCAGAAATGAACAGGAGACATAGCATTGCAGGATCATCAGTAAGAGATGATGAGAGCTTGGGAAGCTGCTCATCCGTACCAAGTTATATGGCATCCACTCAGTCAGCAAAAGCAAGAACAACGCGTTTGCAGAGTCCATTAGGCGTGGAAAATGGCACACCACCAGCGAAGGGATCTGCTGGTTCTGTGAAGAAGCGACTCTCTTACTCACCTTCACCAGCCATTACAAGACGGCATTCAGGTCCACCAAAGGTCGAGATTACCTCCACAAACACCTCTAATGCTGAGAAATATGTGAATGGAGTTGTCAACTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g084280.1.1SL2.50ch10:63899139..63901714479+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g084280.1SL2.50ch10:63899140..639017142,575+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g084280.1.1.1SL2.50ch10:63899140..6389920566+n/a
exonexon:Solyc10g084280.1.1.2SL2.50ch10:63899306..63899626321+n/a
exonexon:Solyc10g084280.1.1.3SL2.50ch10:63899828..63900049222+n/a
exonexon:Solyc10g084280.1.1.4SL2.50ch10:63900503..63900622120+n/a
exonexon:Solyc10g084280.1.1.5SL2.50ch10:63901007..63901714708+n/a
intronintron:Solyc10g084280.1.1.1SL2.50ch10:63899206..63899305n/a+n/a
intronintron:Solyc10g084280.1.1.2SL2.50ch10:63899627..63899827n/a+n/a
intronintron:Solyc10g084280.1.1.3SL2.50ch10:63900050..63900502n/a+n/a
intronintron:Solyc10g084280.1.1.4SL2.50ch10:63900623..63901006n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17964113%2Fdetails feature 17964113
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