Solanum lycopersicum mRNA Solyc10g080880.1.1

mRNA details  
Name
Solyc10g080880.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g080880.1.1
Length
1,761
  
Description
Auxin efflux carrier (AHRD V1 ***- D6RT09_SOLLC); contains Interpro domain(s) IPR014024 Auxin efflux carrier, subgroup
Location(s)
SL2.50ch10:62061161..62063920
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016021
Length
2760
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g080880.1.1 Auxin efflux carrier (AHRD V1 ***- D6RT09_SOLLC); contains Interpro domain(s) IPR014024 Auxin efflux carrier, subgroup

ATGATAACAGTTTCAGACCTTTATCATGTTCTAACTGCTGTAGTTCCACTTTATGTAGCTATGATATTGGCATATGGCTCAGTAAAATGGTGGAAGATATTTAGTCCAGATCAATGTTCAGGAATCAATAGATTTGTGGCTCTTTTTGCAGTTCCATTGTTATCTTTTCACTTCATTGCTTCAAACAATCCTTATGCCATGAACTACAGGTTCATAGCAGCTGACACATTACAAAAAGTTATTGTTCTGGTTGTTTTAGCTATTTGGTCAAGAATTAGCTCAAGGGGGTCTCTTGAATGGTCCATTACTTTGTTTTCCCTTTCAACTTTGCCTAATACTTTAGTTATGGGAATCCCTTTGTTAAAAGGGATGTATGGTGATGCCTCAGGTAGTTTAATGGTTCAAATTGTTGTTCTTCAATGTATCATTTGGTACACTTTGATGCTTTTCTTGTTTGAGTATAGAGGTGCTAGAATGCTTATTGCTGAACAGTTTCCTGATACTGGAGGATCAATTGTTTCATTTAAAATTGATTCTGATGTTATTTCATTAGATGGAAAAGAACCATTAGAAACTCAAGCTGAAGTTGGTGATGATGGGAAACTTCATGTAGTTGTTAGGAAATCAGCTAGTTCAAGGTCTGAAATTTTTTCAAGAATGTCACATGGTCATAACACTGGTGGTCTTTCCATGACACCACGACCATCCAATTTGTCTAATGCTGAGATTTACTCTTTGCAATCTTCAACAAATATGACCCCTAGAGATTCAAATTTTAACCATAATGATATATACTCAATGGTGAATGGGAAAAATAATGCAAATATGAGTCCTAGGACATCAAATTTTGGTAACTTGGGATTTGATGAAGAGAGTGGATTTGGGAAGACTAATGTAGGGTACCCTGCACCTACTAATGCTGGGATTTTTTCTCCGGCAATCGGACCGGGGACAAAAAAGAAGGCTAATGGGACAGAAAGTGGAAAAGATCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCACCAGTATCTGAAGGAGGGATTCATGTGTTCAGGGGAGGTGACTTTGGTAATGAGCTTGGAATTGGACATCACTCAAAAGATTATGATGATTTTGGCCGAGAAGAGTTTTCTCTCAGGGATAAAAATAACTCCAATGGATGTCATCGAGAAGAGCCGGTGCTAAAGAAGCTAGGATCGAGTTCTACAGCCGAGCTGTTTCCCAGGACTGCTACTGAAACTAAGGCTACTGCTATGCCTGCTGCTAGTGTGATGACCAGACTTATTCTGATTATGGTGTGGCGAAAACTCATTAGGAACCCGAATACTTATTCTAGTCTCCTTGGTCTTGCTTGGTCCTTGATCTCATTCCGGTGGAACATTCAGATGCCTTTAGTTTTTGCTAAGTCGATATCAATTCTCTCCGATGCTGGTCTTGGAATGGCAATGTTTAGTCTTGGTTTGTTCATGGCGTTGCAGCCTAAAATGATCTCCTGTGGAAAATCAATTGCTGCCTTCTCTATGGCAGTGAGATTCATCAGCGGTCCAGCAGTCATGGCTGCTGCCTCCTTCGCTATTGGACTTCGAGGTGTTCTTTTGCATATTGCAATAGTTCAGGCAGCTCTACCTCAAGGAATCGTTCCTTTCGTCTTTGCAAAAGAATACAATCTTCATCCTGATATACTTAGCACAGGGGTTATATTTGGTATGTTAATAGCTCTTCCAATCACTTTGGTTTACTACATTTTGCTGGGGCTTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g080880.1.1SL2.50ch10:62061160..62063920587-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g080880.1SL2.50ch10:62061161..620639202,760-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g080880.1.1.1SL2.50ch10:62062819..620639201,102-n/a
exonexon:Solyc10g080880.1.1.2SL2.50ch10:62062392..62062662271-2
exonexon:Solyc10g080880.1.1.3SL2.50ch10:62062163..6206224886-1
exonexon:Solyc10g080880.1.1.4SL2.50ch10:62061900..62062057158-2
exonexon:Solyc10g080880.1.1.5SL2.50ch10:62061608..6206168477-n/a
exonexon:Solyc10g080880.1.1.6SL2.50ch10:62061161..6206122767-1
intronintron:Solyc10g080880.1.1.2SL2.50ch10:62062663..62062818n/a-n/a
intronintron:Solyc10g080880.1.1.3SL2.50ch10:62062249..62062391n/a-n/a
intronintron:Solyc10g080880.1.1.4SL2.50ch10:62062058..62062162n/a-n/a
intronintron:Solyc10g080880.1.1.5SL2.50ch10:62061685..62061899n/a-n/a
intronintron:Solyc10g080880.1.1.6SL2.50ch10:62061228..62061607n/a-n/a
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Related viewsNone found
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