Solanum lycopersicum mRNA Solyc10g078500.1.1
mRNA details
|
| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc10g078500.1.1
|
Length
315
|
|
Description
Small basic intrinsic protein 1-2 (AHRD V1 *-*- B5KGP0_OLEEU); contains Interpro domain(s) IPR000425 Major intrinsic protein
|
|
Location(s)
SL2.50ch10:60302536..60303877
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0016020
- Length
- 1342
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g078500.1.1 Small basic intrinsic protein 1-2 (AHRD V1 *-*- B5KGP0_OLEEU); contains Interpro domain(s) IPR000425 Major intrinsic protein
ATGAAGATGGGTGTTGTTAAAGCAGTGGTAGCTGATTTTGTAATGACATTTATTGCGATATTTTGTGTTTCAACGATTGGGGTTTTGACTTACATTATTAGATCTGCATTTGGAATCGCTCCTGGATTGGCATCTCTGTCAATCACTATTCTCATTGTTTTCCTCCTCTTTCTAATGCTTAGTGTTATAGCTGAGGCTTTGGGTGGCGCAGCCTTCAATCCCGCCGCTACCGCCGCGTTTTATGCTGCCGGAGTTGGAAAGGATTCGCTCTTCTCCGTTGCTGCTCGATTTCCTGCTCAGTATTTACTTTTATAA
ATGAAGATGGGTGTTGTTAAAGCAGTGGTAGCTGATTTTGTAATGACATTTATTGCGATATTTTGTGTTTCAACGATTGGGGTTTTGACTTACATTATTAGATCTGCATTTGGAATCGCTCCTGGATTGGCATCTCTGTCAATCACTATTCTCATTGTTTTCCTCCTCTTTCTAATGCTTAGTGTTATAGCTGAGGCTTTGGGTGGCGCAGCCTTCAATCCCGCCGCTACCGCCGCGTTTTATGCTGCCGGAGTTGGAAAGGATTCGCTCTTCTCCGTTGCTGCTCGATTTCCTGCTCAGTATTTACTTTTATAA
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g078500.1.1 | SL2.50ch10:60302535..60303877 | 105 | - | n/a |
Add items to a list:
| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g078500.1 | SL2.50ch10:60302536..60303877 | 1,342 | - | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g078500.1.1.1 | SL2.50ch10:60303578..60303877 | 300 | - | n/a |
| exon | exon:Solyc10g078500.1.1.2 | SL2.50ch10:60302536..60302550 | 15 | - | n/a |
| intron | intron:Solyc10g078500.1.1.2 | SL2.50ch10:60302551..60303577 | n/a | - | n/a |
Add items to a list:
| Related views |
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
mRNA details
mRNA details

