Solanum lycopersicum mRNA Solyc10g051310.1.1
 mRNA details
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| Name | Type | Organism | |
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Synonyms / aliases
mRNA:Solyc10g051310.1.1
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Length
828
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|
Description
ATP-dependent Clp protease proteolytic subunit (AHRD V1 **** Q42886_SOLLC); contains Interpro domain(s) IPR018215 Peptidase S14, ClpP, active site
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Location(s)
SL2.50ch10:51916511..51921433
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0006508
- Length
- 4923
- Sifter term
- GO:0005515
- GO:0004176
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g051310.1.1 ATP-dependent Clp protease proteolytic subunit (AHRD V1 **** Q42886_SOLLC); contains Interpro domain(s) IPR018215 Peptidase S14, ClpP, active site
ATGGTAACGTCTGCAATTGCTGGAACGTCAATTGTACCAGTCTCTTCCCGGCACCAAACGTCTTTTTCGTCTCTGCTTTCCTCTAGAAGCTTAAGGAAAAATGTAGTTTCTGTTCTTCGAAGTCCATATTCTGATTCATCAGATATTGGATTTTCAAGCAAGAAGTTGGGGATCCCATTAAAGTTCAATGAGTACGAATCCGGTGCTCATACCAATTCAAGCTATGGTGTTATCGTAGCAAAAGAGGGGGCTAATCCGCCCATCATGCCCGCCGTGATGACACCAGTGGGCGCGTTGGATCTTTCTACCGTGTTATTCAGGAATCGAATTATCTTCATTGGACAACCAGTCAACTCTGCAGTTGCTCAGAAAGTAATATCACAACTTGTGACCCTTGCAACTATAGATGAAAACGCAGATATTTTGATCTATCTTAACTGTCCTGGTGGAAGCACATACTCTGTCTTGGCAATATATGACTGCATGTCATGGATAAAGCCTAAGGTTGGTACAGTATGTTTTGGAGCTGCTGCAAGCCAAGGAGCACTTCTTCTTGCTGGTGGAGAAAAGGGCATGAGGTATGCAATGCCAAATGCACGTATAATGATTCATCAACCTCAAAGTGGATGTGGAGGGCACGTGGAGGATGTGCGGCGCCAAGTAAATGAAGCGGTTCAATCTCGCCAGAAAGTCGACAAAATGTATGCTGCTTTTACTGGCCAATCAATTGAGATGATACAAACATACACTGAAAGGGATCGTTTTATGTCTTCCGCTGAGGCCATGGAGTTTGGTCTCATTGACGGGGTGCTAGAAACAGAGTACTAG
ATGGTAACGTCTGCAATTGCTGGAACGTCAATTGTACCAGTCTCTTCCCGGCACCAAACGTCTTTTTCGTCTCTGCTTTCCTCTAGAAGCTTAAGGAAAAATGTAGTTTCTGTTCTTCGAAGTCCATATTCTGATTCATCAGATATTGGATTTTCAAGCAAGAAGTTGGGGATCCCATTAAAGTTCAATGAGTACGAATCCGGTGCTCATACCAATTCAAGCTATGGTGTTATCGTAGCAAAAGAGGGGGCTAATCCGCCCATCATGCCCGCCGTGATGACACCAGTGGGCGCGTTGGATCTTTCTACCGTGTTATTCAGGAATCGAATTATCTTCATTGGACAACCAGTCAACTCTGCAGTTGCTCAGAAAGTAATATCACAACTTGTGACCCTTGCAACTATAGATGAAAACGCAGATATTTTGATCTATCTTAACTGTCCTGGTGGAAGCACATACTCTGTCTTGGCAATATATGACTGCATGTCATGGATAAAGCCTAAGGTTGGTACAGTATGTTTTGGAGCTGCTGCAAGCCAAGGAGCACTTCTTCTTGCTGGTGGAGAAAAGGGCATGAGGTATGCAATGCCAAATGCACGTATAATGATTCATCAACCTCAAAGTGGATGTGGAGGGCACGTGGAGGATGTGCGGCGCCAAGTAAATGAAGCGGTTCAATCTCGCCAGAAAGTCGACAAAATGTATGCTGCTTTTACTGGCCAATCAATTGAGATGATACAAACATACACTGAAAGGGATCGTTTTATGTCTTCCGCTGAGGCCATGGAGTTTGGTCTCATTGACGGGGTGCTAGAAACAGAGTACTAG
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g051310.1.1 | SL2.50ch10:51916510..51921433 | 276 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g051310.1 | SL2.50ch10:51916511..51921433 | 4,923 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g051310.1.1.1 | SL2.50ch10:51921348..51921433 | 86 | - | n/a |
| exon | exon:Solyc10g051310.1.1.2 | SL2.50ch10:51921113..51921174 | 62 | - | 1 |
| exon | exon:Solyc10g051310.1.1.3 | SL2.50ch10:51920920..51920992 | 73 | - | 2 |
| exon | exon:Solyc10g051310.1.1.4 | SL2.50ch10:51919923..51920127 | 205 | - | 1 |
| exon | exon:Solyc10g051310.1.1.5 | SL2.50ch10:51919759..51919824 | 66 | - | n/a |
| exon | exon:Solyc10g051310.1.1.6 | SL2.50ch10:51919470..51919610 | 141 | - | n/a |
| exon | exon:Solyc10g051310.1.1.7 | SL2.50ch10:51918895..51918948 | 54 | - | n/a |
| exon | exon:Solyc10g051310.1.1.8 | SL2.50ch10:51916800..51916892 | 93 | - | n/a |
| exon | exon:Solyc10g051310.1.1.9 | SL2.50ch10:51916511..51916558 | 48 | - | n/a |
| intron | intron:Solyc10g051310.1.1.2 | SL2.50ch10:51921175..51921347 | n/a | - | n/a |
| intron | intron:Solyc10g051310.1.1.3 | SL2.50ch10:51920993..51921112 | n/a | - | n/a |
| intron | intron:Solyc10g051310.1.1.4 | SL2.50ch10:51920128..51920919 | n/a | - | n/a |
| intron | intron:Solyc10g051310.1.1.5 | SL2.50ch10:51919825..51919922 | n/a | - | n/a |
| intron | intron:Solyc10g051310.1.1.6 | SL2.50ch10:51919611..51919758 | n/a | - | n/a |
| intron | intron:Solyc10g051310.1.1.7 | SL2.50ch10:51918949..51919469 | n/a | - | n/a |
| intron | intron:Solyc10g051310.1.1.8 | SL2.50ch10:51916893..51918894 | n/a | - | n/a |
| intron | intron:Solyc10g051310.1.1.9 | SL2.50ch10:51916559..51916799 | n/a | - | n/a |
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