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Solanum lycopersicum mRNA Solyc10g047030.1.1

mRNA details  
Name
Solyc10g047030.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g047030.1.1
Length
2,313
  
Description
Beta-xylosidase 4 (AHRD V1 **** D7MRV5_ARALY); contains Interpro domain(s) IPR001764 Glycoside hydrolase, family 3, N-terminal
Location(s)
SL2.50ch10:39228627..39232766
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005975
Length
4140
Nb exon
7
Sifter term
  • GO:0009044
  • GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g047030.1.1 Beta-xylosidase 4 (AHRD V1 **** D7MRV5_ARALY); contains Interpro domain(s) IPR001764 Glycoside hydrolase, family 3, N-terminal

ATGAATGACATAGGAATGGCGTATAATAATCATTTCTCTATTATTGGTTTCATACTATTAAGTTCATTACTGAAACAAGTTTTAGCACAAAATTCACCTGTTTTCGCTTGTGATGTTACGAGTAATCCAGCGTTAGGTAATTTAACCTTTTGTGATGCATCTTTGGCGGTGGAAAACAGAGTGAATGATTTAGTTAATAGATTGACATTGGGAGAAAAGATTGGATTTTTGGTAAGTGGTGCAGGTGGTGTGAGTAGACTTGGTATACCAAAGTATGAATGGTGGTCTGAGGCTTTACATGGTGTTGCATATACTGGTCCAGGAGTACATTTCACTAGTCTTGTTCCTGGTGCAACTAGTTTCCCTCAAGTCATTCTCACTGCTGCTTCTTTCAATGTCACATTGTTTCAAACCATTGGAAAGGTGGTGTCCACAGAGGCTAGGGCAATGTACAATGTTGGTTTAGCAGGTTTAACATATTGGTCTCCAAATGTCAATATTTTTCGTGACCCGAGATGGGGAAGAGGCCAAGAAACACCAGGAGAAGATCCAACACTCACCAGCAAGTATGGTGTAGCCTATGTCAAAGGCTTACAACAAACAGATGATGGCAGCACAAATAAGCTCAAGGTTGCTGCTTGTTGTAAGCATTATACAGCTTATGATGTTGATAATTGGAAAGGAATCGAAAGATACAGTTTCAATGCTGTGGTAAGACAACAAGATTTAGATGATACATTTCAACCTCCATTCAGAAGTTGTGTACTTGAAGGAGCTGTAGCCAGTGTGATGTGTTCGTATAACCAAGTCAATGGCAAACCTACCTGTGGTGATCCGAATCTTCTTGCTGGGATTGTAAGAGGAGAATGGAAATTAAATGGATACATAGTCACAGATTGCGATTCATTACAAGTGATATTTAAATCCCAAAACTACACTAAAACACCAGAGGAGGCTGCTGCTTTGGGTCTAAATTCAGGGGTGGACTTGAATTGTGGATCTTGGTTGAGTACATATACTCAAGGTGCTGTTAACCAAAAACTTGTGAATGAATCAGTTATTGATAGAGCTATCTCGAATAATTTTGCAACACTAATGAGACTTGGATTCTTTGATGGTAATCCAAAAAGCCGTATTTATGGAAACCTTGGCCCTAAAGATGTTTGCACCCCAGAAAACCAAGAGCTAGCTCGTGAAGCTGCAAGACAAGGGATAGTCTTGCTGAAAAATACTGCAGGATCGCTACCTTTAACTCCGACTGCCATCAAATCATTGGCAGTCATTGGTCCTAATGCTAATGTGACAAAAACCATGATCGGCAATTATGAAGGTATTCCATGCAAGTACACAACTCCGTTGCAAGGTCTAACAGCCTCAGTTGCCACAATTTACAAGCCAGGATGTGCTGATGTGTCTTGCAACACTGCCCAAATCGATGATGCTAAGCAAATAGCTACCACGGCTGATGCTGTAGTTTTAGTAATGGGATCTGATCAATCTATTGAGAAAGAAAGCCTGGACAGAACAAGTATAACTCTTCCAGGACAGCAATCAATTCTAGTAGCTGAGGTAGCTAAAGTTGCCAAGGGACCTGTAATCCTTGTTATCATGTCTGGAGGTGGAATGGACGTACAATTTGCTGTCGACAATCCTAAGATAACAAGCATTCTTTGGGTTGGTTTCCCTGGAGAAGCCGGCGGTGCTGCCTTAGCAGATGTTATCTTTGGATATTATAACCCAAGTGGAAGGCTCCCAATGACATGGTATCCACAATCATATGCAGACGTTGTTCCAATGACTGATATGAACATGAGGCCGAACCCTGCCACAAACTACCCTGGCAGGACTTATAGATTTTATACTGGTCCAACTGTTTTCACATTTGGTCATGGATTAAGCTACTCTCAGTTCAAACACCATCTTGATAAAGCGCCACAATTTGTCTCCCTCCCTCTCGGGGAAAAACATACTTGTCGTTTGAGTAAGTGCAAGACTGTTGATGCGGTTGGGCAAAGCTGCAGCAATATGGGATTTGACATTCATCTAAGAGTTAAAAATGTAGGGAAGATAAGTGGAAGCCATATAATTTTCTTGTTCACTTCACCACCCTCAGTCCATAATGCACCTAAGAAACATTTGTTGGGGTTCGAGAAAGTTCATTTGACACCCCAAGGAGAAGGGGTTGTTAAGTTCAACGTCAATGTTTGCAAGCATTTGAGTGTACATGATGAGCTTGGAAACAGGAAAGTTGCATTAGGACCACATGTTCTTCATATAGGAGATTTGAAGCATTCCTTGACTGTGAGGATTTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g047030.1.1SL2.50ch10:39228626..39232766771+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g047030.1SL2.50ch10:39228627..392327664,140+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g047030.1.1.1SL2.50ch10:39228627..39229049423+n/a
exonexon:Solyc10g047030.1.1.2SL2.50ch10:39230453..39230740288+n/a
exonexon:Solyc10g047030.1.1.3SL2.50ch10:39230854..39231023170+n/a
exonexon:Solyc10g047030.1.1.4SL2.50ch10:39231105..3923120298+1
exonexon:Solyc10g047030.1.1.5SL2.50ch10:39231273..39231623351+2
exonexon:Solyc10g047030.1.1.6SL2.50ch10:39231703..39232113411+2
exonexon:Solyc10g047030.1.1.7SL2.50ch10:39232195..39232766572+2
intronintron:Solyc10g047030.1.1.1SL2.50ch10:39229050..39230452n/a+n/a
intronintron:Solyc10g047030.1.1.2SL2.50ch10:39230741..39230853n/a+n/a
intronintron:Solyc10g047030.1.1.3SL2.50ch10:39231024..39231104n/a+n/a
intronintron:Solyc10g047030.1.1.4SL2.50ch10:39231203..39231272n/a+n/a
intronintron:Solyc10g047030.1.1.5SL2.50ch10:39231624..39231702n/a+n/a
intronintron:Solyc10g047030.1.1.6SL2.50ch10:39232114..39232194n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17952047%2Fdetails feature 17952047
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