Solanum lycopersicum mRNA Solyc10g017530.2.1

mRNA details  
Name
Solyc10g017530.2.1
Type
mRNA
Length
1,756
Organism
Solanum lycopersicum
Description
ATP-dependent RNA Helicase (AHRD V1 **** Q7PDT0_PLAYO); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch10:5510044..5519613
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
9570
Nb exon
9
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g017530.2.1 ATP-dependent RNA Helicase (AHRD V1 **** Q7PDT0_PLAYO); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

GTTTCTGCAATCATTTCTCACATTTTCTTCACAACATCTTCAAAATTCTCTAAAATTTCTACCAAAAATTCTATACAATTTCTTCAAATTTGGTAGAACTTTTTTGTTTGTACATTTTTTTGTTAGATCGAATTTTAAGCTTCAGATAATACTTTTGTGGACGGTTTTTGTTGCTCCAATTAGTATTATTCTTTAGGGTTTTTGTTTTGAGATCCGGTTTATTTATTGGTTATGAATCCCAGAGGAAGATATCCACCGCCGGGAATGGGAAGCGGCGGCGGAGGCGGCGGACGCGGGGGCGGAAACATGTACCCTAACGCTAACCCTAATTTTCAACCGAGAAATCCACAGCAGTATGTGCAGAGAGGTCCGGTGAACCAGCAGCAGCAGTTTCAGAACCAACAGGCACAGCAATGGCTCAGAAGGAACCAGTTGGCATCTGATTCTACGGTTGATGAGGTTGAAAAGACGGTACAATCTGAAGCAGTTGATCAAAGTTCACAAGACTGGAAGGCGAGGTTGAAGATACCACCAGCGGATACTAGATACAGGACAGAGGATGTGACAGCGACCAAGGGAAATGAATTTGAAGACTATTTTCTTAAGCGTGAATTGCTTATGGGAATTTATGAAAAGGGTTTTGAAAGACCATCTCCAATCCAGGAAGAGAGTATCCCAATTGCTCTTACTGGGAGTGATATTTTGGCGAGGGCCAAAAATGGAACAGGGAAAACTGCTGCCTTCTGCATTCCGGCATTGGAAAAAATTGACCAGGACGTCAATGCCATTCAAGTTGTTATCCTTGTTCCTACGCGAGAATTGGCTCTTCAAACATCTCAAGTTTGCAAAGAACTTGGGAAGCACTTAAAAATTGAAGTCATGGTTACCACTGGGGGGACCAGCTTGAAGGATGATATAATGCGACTCTATCAACCGGTACATTTACTAGTTGGAACCCCTGGAAGAATACTCGACCTTGCGAGAAAGGGAATATGTGTTTTGAAAGATTGTTCCATGCTTGTCATGGATGAGGCTGATAAGCTTCTTTCTCCGGAGTTTCAACCTTCCATCGTGCAGCTGATTCGTTTCTTGCCAGCAAATCGTCAAGTTTTAATGTTCTCAGCTACATTCCCTGTCACAGTCAAGGACTTTAAAGAAAGATACTTGCAGAAGCCATATGTTATCAACCTTATGGATGAACTTACTCTCAAGGGTATAACTCAATTTTATGCCTTCGTAGAGGAAAGGCAGAAGCTTCATTGCCTTAACACTTTATTCTCAAAGCTTCAAATCAACCAATCAATTATCTTTTGCAACTCTGTAAACCGTGTGGAACTGCTTGCCAAGAAGATCACAGAATTAGGCTATTCATGCTTCTACATCCATGCAAAGATGCTTCAAGATCATAGGAACAGAGTATTTCATGACTTCCGTAATGGTGCCTGCAGGAACCTTGTTTGTACTGATCTGTTTACTAGAGGGATAGATATTCAAGCAGTCAATGTTGTTATAAATTTTGATTTCCCGAAGAACTCAGAGACATATTTACACAGGGTTGGGCGATCAGGGAGATTTGGGCATCTTGGTTTAGCTGTGAACCTGATTACTTATGAGGATCGCTTCAACCTGTACAGAATTGAACAAGAACTAGGAACAGAGATCAAGCAAATTCCTCCGCACATAGATCAGGCTATATATTGCCTTTGATCAGTTAGCTGCTCGGTTATGGTGCACCAATGGTGAGTCTTTTGTACAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g017530.2.1SL2.50ch10:5510274..5519564492+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g017530.2SL2.50ch10:5510044..55196139,570+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g017530.2.1.1SL2.50ch10:5510044..5510540497+n/a
exonexon:Solyc10g017530.2.1.2SL2.50ch10:5512392..551245261+n/a
exonexon:Solyc10g017530.2.1.3SL2.50ch10:5516145..5516379235+1
exonexon:Solyc10g017530.2.1.4SL2.50ch10:5517024..5517262239+n/a
exonexon:Solyc10g017530.2.1.5SL2.50ch10:5517708..5517959252+2
exonexon:Solyc10g017530.2.1.6SL2.50ch10:5518037..5518217181+n/a
exonexon:Solyc10g017530.2.1.7SL2.50ch10:5519160..551924889+n/a
exonexon:Solyc10g017530.2.1.8SL2.50ch10:5519330..551940374+2
exonexon:Solyc10g017530.2.1.9SL2.50ch10:5519486..5519613128+n/a
intronintron:Solyc10g017530.2.1.1SL2.50ch10:5510541..5512391n/a+n/a
intronintron:Solyc10g017530.2.1.2SL2.50ch10:5512453..5516144n/a+n/a
intronintron:Solyc10g017530.2.1.3SL2.50ch10:5516380..5517023n/a+n/a
intronintron:Solyc10g017530.2.1.4SL2.50ch10:5517263..5517707n/a+n/a
intronintron:Solyc10g017530.2.1.5SL2.50ch10:5517960..5518036n/a+n/a
intronintron:Solyc10g017530.2.1.6SL2.50ch10:5518218..5519159n/a+n/a
intronintron:Solyc10g017530.2.1.7SL2.50ch10:5519249..5519329n/a+n/a
intronintron:Solyc10g017530.2.1.8SL2.50ch10:5519404..5519485n/a+n/a
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Related viewsNone found
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