Solanum lycopersicum mRNA Solyc10g012030.2.1
mRNA details
|
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g012030.2.1 cDNA clone J023132J12 full insert sequence (AHRD V1 ***- B7EL27_ORYSJ)
ATGAGCTTGGAGACTGATGGTGGGAGCTCCACAGATTGTGCCTCGGAAACTCAGAAGCATTCAAGAAAATCATATTCAAGAGAGGTTCTGTTGTCAATAAGTCAATTGGAGATATGCAAGAAATTACCTAGTGGATTTAATGAGCCGACCCTGAGTAAACTTGAAGACAGTTCACATGGTATACAAGACCGCCAACGAGTACCTGGCAGCTTACCTTTGCAAGGGTTTAGACGCACCGACTATAGTTCATCCCCACCTACTCGTGGGGATTCCAGTAGTTATTCCCGAGGCAATTATGGAAGATGGGAAAGCCGTTCGTCTGGATGGAGTGATCGAGATAATGATGCACAATCTGATCGGGATTCAGATTCTGGTAGGAGATATGGCAATCAAGCCCTGCGCATTTCACAGAGTTCTGAGCATGATGGGCTTCTTGGAAGTGGTTCGTTTCCACGGCCATCTGCGTATGGATCTGGAATACCTGCACCTAAGGTCCAAGCAAGCAATAACTATCAATCTAACAAGACCATGGAGCCATATCATCCTCCTCGCCCTTATAAGGCGGGACCTCACCCTCGAAAAGACACTGATGCGATCAATGACGAGACTTTTGGTTCAGTTGAGTGTACCAGTGAGGATAGAGTGGAAGAGGAAAGAAGGAGAAGAGCTTCTTTTGAGTTGATGAGGAAAGAACAGCATAAAATTCTTCAAGAGAAGCAGAAGTCAAAACTGGAGAAGCATAAAACTGAGGACATTATAGTACAGCTTGAAGATAATAAGGAGGATAGAACAGTTTTGGAAAAAAATAGTGAAGTAGATGGGATGACCACCCGACCTTCAGCAAACAGTGGTCTGGGAAAAACTTCTTTTCCTTCACAGAATCCACCAGCTAGACCGCGTATACCCCCCGGCTTTAAAACCACTGTGTTGGATAAGAACTCTGGCTCAAATTTGAGCCATTCACGCGTGACAGAGGTTGGAGAATCTGCTAAGGAAGAAAGCCTATTGGAAGTAAAAGCCTATGCTGCCCCAAATGGTACTCTTCATAGTGTAGAGAGACAGAGCTTGCAAGAAATTAGCTCGAGTTATAAACTTGAAGATACTTCTGCCAGGACACTTGGCATGGAAGATCATTTCAATCAGAGAGCAACTCTTTTAGAGGCTCATGAAGCCTTGCATGAGCCTGGAATTATTGAACACAGTACCCAGCAATCTGATAGGAAATTTGCTAAGTCTAGTCAAGACCCTTCAGCATCAATCTTGGATAAGATATTTGGAAGTGTTATACCAATTAATGTTGGTGACTCTGAGGCTCCTGTTATGAATCACGATAGTAAACCAAATGACATGTTGGGCTCAAAGGCAATACAGTCTTCAAAGTTCGCTCAATGGTTTAAGGAAGAAGATAGGAAGACAACAGACGACTCCTCGTCAAATAGGCCAAATGATTTGCTTGCATTAATTGTTGGTGGCGATAAATCCAGATCACAAGCTTTTGATGGTAACATTTCAAAAAGCTTTCCGTCTGAATTTTTCGATCGGAGTCCCGAGCCTACAAGTAAGGTCACATTGCATATGCCTTCTGCACCACTTGGGGTCCCTGAGCTTATGCATGATTCTAGTAAAAGGGAAGCCATCCCGCCGATCCTTACTTGTGAGGACCTTGAACATAAAATGTTGTCAGAGTATAGTGAAAAGAAACCTAATCTGCAGCCTACTTCGCAAGTTTATGGTACTAATCGCTTAGACACTGTAGAACAACCGGCAAATGTGGACAGCAATGCATCTCAACACCTCCTCTCATTATTACAGAAGGGGACAGGTCTTACAAATATGAAAGGGAAGGGCAGTACTGGCACTGACGCCCAGGATGGACATGATGAGTTTACTGTGCATGGCAGATCTAAGGAGGAAACTGCCAGGGATTCTCACGCTCCAGGAAAGGCAGTTACACTTGAAACCCTCTTTGGATCTGCTTTTATGAAGGAGCTGCAATCCGTACAAGCTCCAGTTTCAATTCAGAAGAACTCAGTTGGTCCTGGACTAATTGATGATTCAGAGACACACAAGTCATCCTTGCCTGGTTTTGATGATGGCCTATTTTCTTCCATGATTGATGGTATTGGACCAAAAGGAGGTGAAAACTTATTTAGTGCTCGTGATCATTCGAATCCCCAGGTCTCAATGGTTATGCCTGCAGGGATTTTGGGTAAAGGAGAGTTGACAACTGGTAGTGTTTCTGGCGGTGACGAAAGGTCCTTGATGAGTCTAGAAGGTCTGCCTTTATCGAGCGTTCCCTATGATCAGTCTGAAATGCCATTGCATCATCGTCTTGCTCAACCATCATCTCTGCAGTTTCATCCCCTGCAAATGAGCCAAGGGAGGCCATTATTTAATCCAATGGATTCTGGTCCTGCTCATTTAAATCCTCAGATTTTCAATGGTCGAGAGAGCATGGGTTTACATGAAGCTCCTGGTCGTCAGTTTGCGGGAAATATGAATCGACCTCCATTTCACCACCCTAATGGTGGACTGACAGGGTTTGATCTCCCTGCCCACCATCCTATGCTGCAGCAGATGCAGATGGCCGGAAATAACCCTAATCTGCTACAGGACCGTCTAAGGGGCGCACAGGTTCCTTCACATCTCAGTAATCAAGCAGCTAACAATATGCAGGAAGTTAACAGAGTTCAAGCTTTCCCTTTTGTGCCTCACCAAGTCAACATTAGTGGCCGTACTGTGCAAATGCCAGATCCAGATATCAATAGCAGAAACAATCATCCTGAGTCCATGCAAAGGCTTGCTGAGAGGCAACTTGGGGCTCCTAAGCAGATCCACCCTTTTGCTGGTGGCAATGTCCAGGGGATGTACAGTCACGAGCTTGACATGGGATTGCGATACAGATAGTTGATCAGGGAACGAGTCGGTAGCTACATTTGCAACTGGGTACCATGTTTTCTTTTCCTGGTTTGACTGAGAATCCGTTGTTACAACTTTACCATGTTGTACTGCCTTTACCATCGAACCAAAGAATTGGAAACCATGCTGGCCTTCTGCTTTTTAGCATGAGGTACAGACATGTAGACTCCTGGAAAGTTGTGTAATTTTAGATTTTATTTTCTTGTACTTGGTAGGGTTTAGGGTCTCATCTTGTCATGCATGGTTCAATTATTTGGCCTTTC
ATGAGCTTGGAGACTGATGGTGGGAGCTCCACAGATTGTGCCTCGGAAACTCAGAAGCATTCAAGAAAATCATATTCAAGAGAGGTTCTGTTGTCAATAAGTCAATTGGAGATATGCAAGAAATTACCTAGTGGATTTAATGAGCCGACCCTGAGTAAACTTGAAGACAGTTCACATGGTATACAAGACCGCCAACGAGTACCTGGCAGCTTACCTTTGCAAGGGTTTAGACGCACCGACTATAGTTCATCCCCACCTACTCGTGGGGATTCCAGTAGTTATTCCCGAGGCAATTATGGAAGATGGGAAAGCCGTTCGTCTGGATGGAGTGATCGAGATAATGATGCACAATCTGATCGGGATTCAGATTCTGGTAGGAGATATGGCAATCAAGCCCTGCGCATTTCACAGAGTTCTGAGCATGATGGGCTTCTTGGAAGTGGTTCGTTTCCACGGCCATCTGCGTATGGATCTGGAATACCTGCACCTAAGGTCCAAGCAAGCAATAACTATCAATCTAACAAGACCATGGAGCCATATCATCCTCCTCGCCCTTATAAGGCGGGACCTCACCCTCGAAAAGACACTGATGCGATCAATGACGAGACTTTTGGTTCAGTTGAGTGTACCAGTGAGGATAGAGTGGAAGAGGAAAGAAGGAGAAGAGCTTCTTTTGAGTTGATGAGGAAAGAACAGCATAAAATTCTTCAAGAGAAGCAGAAGTCAAAACTGGAGAAGCATAAAACTGAGGACATTATAGTACAGCTTGAAGATAATAAGGAGGATAGAACAGTTTTGGAAAAAAATAGTGAAGTAGATGGGATGACCACCCGACCTTCAGCAAACAGTGGTCTGGGAAAAACTTCTTTTCCTTCACAGAATCCACCAGCTAGACCGCGTATACCCCCCGGCTTTAAAACCACTGTGTTGGATAAGAACTCTGGCTCAAATTTGAGCCATTCACGCGTGACAGAGGTTGGAGAATCTGCTAAGGAAGAAAGCCTATTGGAAGTAAAAGCCTATGCTGCCCCAAATGGTACTCTTCATAGTGTAGAGAGACAGAGCTTGCAAGAAATTAGCTCGAGTTATAAACTTGAAGATACTTCTGCCAGGACACTTGGCATGGAAGATCATTTCAATCAGAGAGCAACTCTTTTAGAGGCTCATGAAGCCTTGCATGAGCCTGGAATTATTGAACACAGTACCCAGCAATCTGATAGGAAATTTGCTAAGTCTAGTCAAGACCCTTCAGCATCAATCTTGGATAAGATATTTGGAAGTGTTATACCAATTAATGTTGGTGACTCTGAGGCTCCTGTTATGAATCACGATAGTAAACCAAATGACATGTTGGGCTCAAAGGCAATACAGTCTTCAAAGTTCGCTCAATGGTTTAAGGAAGAAGATAGGAAGACAACAGACGACTCCTCGTCAAATAGGCCAAATGATTTGCTTGCATTAATTGTTGGTGGCGATAAATCCAGATCACAAGCTTTTGATGGTAACATTTCAAAAAGCTTTCCGTCTGAATTTTTCGATCGGAGTCCCGAGCCTACAAGTAAGGTCACATTGCATATGCCTTCTGCACCACTTGGGGTCCCTGAGCTTATGCATGATTCTAGTAAAAGGGAAGCCATCCCGCCGATCCTTACTTGTGAGGACCTTGAACATAAAATGTTGTCAGAGTATAGTGAAAAGAAACCTAATCTGCAGCCTACTTCGCAAGTTTATGGTACTAATCGCTTAGACACTGTAGAACAACCGGCAAATGTGGACAGCAATGCATCTCAACACCTCCTCTCATTATTACAGAAGGGGACAGGTCTTACAAATATGAAAGGGAAGGGCAGTACTGGCACTGACGCCCAGGATGGACATGATGAGTTTACTGTGCATGGCAGATCTAAGGAGGAAACTGCCAGGGATTCTCACGCTCCAGGAAAGGCAGTTACACTTGAAACCCTCTTTGGATCTGCTTTTATGAAGGAGCTGCAATCCGTACAAGCTCCAGTTTCAATTCAGAAGAACTCAGTTGGTCCTGGACTAATTGATGATTCAGAGACACACAAGTCATCCTTGCCTGGTTTTGATGATGGCCTATTTTCTTCCATGATTGATGGTATTGGACCAAAAGGAGGTGAAAACTTATTTAGTGCTCGTGATCATTCGAATCCCCAGGTCTCAATGGTTATGCCTGCAGGGATTTTGGGTAAAGGAGAGTTGACAACTGGTAGTGTTTCTGGCGGTGACGAAAGGTCCTTGATGAGTCTAGAAGGTCTGCCTTTATCGAGCGTTCCCTATGATCAGTCTGAAATGCCATTGCATCATCGTCTTGCTCAACCATCATCTCTGCAGTTTCATCCCCTGCAAATGAGCCAAGGGAGGCCATTATTTAATCCAATGGATTCTGGTCCTGCTCATTTAAATCCTCAGATTTTCAATGGTCGAGAGAGCATGGGTTTACATGAAGCTCCTGGTCGTCAGTTTGCGGGAAATATGAATCGACCTCCATTTCACCACCCTAATGGTGGACTGACAGGGTTTGATCTCCCTGCCCACCATCCTATGCTGCAGCAGATGCAGATGGCCGGAAATAACCCTAATCTGCTACAGGACCGTCTAAGGGGCGCACAGGTTCCTTCACATCTCAGTAATCAAGCAGCTAACAATATGCAGGAAGTTAACAGAGTTCAAGCTTTCCCTTTTGTGCCTCACCAAGTCAACATTAGTGGCCGTACTGTGCAAATGCCAGATCCAGATATCAATAGCAGAAACAATCATCCTGAGTCCATGCAAAGGCTTGCTGAGAGGCAACTTGGGGCTCCTAAGCAGATCCACCCTTTTGCTGGTGGCAATGTCCAGGGGATGTACAGTCACGAGCTTGACATGGGATTGCGATACAGATAGTTGATCAGGGAACGAGTCGGTAGCTACATTTGCAACTGGGTACCATGTTTTCTTTTCCTGGTTTGACTGAGAATCCGTTGTTACAACTTTACCATGTTGTACTGCCTTTACCATCGAACCAAAGAATTGGAAACCATGCTGGCCTTCTGCTTTTTAGCATGAGGTACAGACATGTAGACTCCTGGAAAGTTGTGTAATTTTAGATTTTATTTTCTTGTACTTGGTAGGGTTTAGGGTCTCATCTTGTCATGCATGGTTCAATTATTTGGCCTTTC
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g012030.2.1 | SL2.50ch10:4322959..4331475 | 969 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g012030.2 | SL2.50ch10:4322685..4331475 | 8,791 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g012030.2.1.1 | SL2.50ch10:4331420..4331475 | 56 | - | 1 |
| exon | exon:Solyc10g012030.2.1.10 | SL2.50ch10:4324674..4325408 | 735 | - | 2 |
| exon | exon:Solyc10g012030.2.1.11 | SL2.50ch10:4323984..4324595 | 612 | - | 2 |
| exon | exon:Solyc10g012030.2.1.12 | SL2.50ch10:4322685..4323114 | 430 | - | n/a |
| exon | exon:Solyc10g012030.2.1.2 | SL2.50ch10:4331208..4331306 | 99 | - | 1 |
| exon | exon:Solyc10g012030.2.1.3 | SL2.50ch10:4330848..4331059 | 212 | - | 2 |
| exon | exon:Solyc10g012030.2.1.4 | SL2.50ch10:4329568..4329761 | 194 | - | n/a |
| exon | exon:Solyc10g012030.2.1.5 | SL2.50ch10:4329356..4329461 | 106 | - | 2 |
| exon | exon:Solyc10g012030.2.1.6 | SL2.50ch10:4328220..4328527 | 308 | - | n/a |
| exon | exon:Solyc10g012030.2.1.7 | SL2.50ch10:4327203..4327326 | 124 | - | 2 |
| exon | exon:Solyc10g012030.2.1.8 | SL2.50ch10:4326913..4327136 | 224 | - | n/a |
| exon | exon:Solyc10g012030.2.1.9 | SL2.50ch10:4325517..4325598 | 82 | - | 2 |
| intron | intron:Solyc10g012030.2.1.10 | SL2.50ch10:4325409..4325516 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.11 | SL2.50ch10:4324596..4324673 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.12 | SL2.50ch10:4323115..4323983 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.2 | SL2.50ch10:4331307..4331419 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.3 | SL2.50ch10:4331060..4331207 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.4 | SL2.50ch10:4329762..4330847 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.5 | SL2.50ch10:4329462..4329567 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.6 | SL2.50ch10:4328528..4329355 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.7 | SL2.50ch10:4327327..4328219 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.8 | SL2.50ch10:4327137..4327202 | n/a | - | n/a |
| intron | intron:Solyc10g012030.2.1.9 | SL2.50ch10:4325599..4326912 | n/a | - | n/a |
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mRNA details
mRNA details

