Solanum lycopersicum mRNA Solyc10g007990.2.1
mRNA details
|
| Name | Type |
Length
1,195
|
Organism |
| Description |
|
Location(s)
SL2.50ch10:2144877..2151960
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0055114
- Length
- 7084
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g007990.2.1 Cupin RmlC-type (AHRD V1 **-- B6T568_MAIZE); contains Interpro domain(s) IPR012864 Protein of unknown function DUF1637
TAGGTGGCAATGATAATAGAAAGCTGCATCCATTAAGCACCACGTGATATACGATCATCACCTTTGTTTGTGTTAAAAGTCCAGCCTGTGCCTGATTTGTACTTGAAGGGTCTTCTGAGAAATAGAGGACCCTTCAGACAGGATTTCTTGGGTTAAACTTCGAGCTGTTAACTACAAGACAAGTTTGTTTGCATAGGCGGTCAGGGTAAAGGTGGTCGGTTTGATAAACATGCCAGCTGTACAAAAGCTTTATAACGCCTGTAAAGCATCACTTTCTACTAATGGACCCATATCAGAAGATGCTCTTGAGAAAGTCCGTTCCCTCTTAGACAAAATCAAGCCTTCTGATGTAGGTCTTGAGCAGGAGGCACAACTTGTCAAGACTTGGAAAGGTACCATGCATGAGCGTAATGGGGGTTTACGACCAATCCTGCCAATCAAATACCTACACTTGCATGAATGTGAGAGCTTCACTATGGGAATATTCTGCATGCCACCTTCTTCAATCATTCCTTTACATAACCACCCTGGGATGACCGTTTTAAGCAAGCTTATATATGGTTCCTTACATGTGAAAGCTTATGATTGGATCGATAGTCCGGGGCCTTCAGTTCCACCCGAAGGTGCAAGACCAGCTAAACTTTTTAAAGATTGTGAGATGACAGCTCCATGTGGAACAACTACTCTCTATCCGACGGCTGGAGGGAATATTCATTGTTTCAAAGCTATAACCCCTTGTGCAATTTTCGATATCCTGTCTCCACCCTACTCTTCTGATGATGGACGTCATTGCACTTATTTCCGAAGGTCTCCTCGAGGGGATCTACCAGGTGAACTCGAGTTCGATGGGGAGATGTTCACAGATGTGACTTGGTTGGAAGAGTTTCAACCTCCTGATGACTTTGTCATCCATCGAGGCCAATACAAGGGTCGTACCATCAAACCATAGGGAATGGTTCATTTTTGGTTCTATTGATCAACTTATTGAATGCAGTGATTAGTTGATTTGGGCGTTATTGAGGTGAAGTTGTTATATGTCTAGACAAATATGGAAATAATATGTTTTCTAGAGAATAGGCCATTTTCTCATGTACATATTATATAACATACATTAATTTAGATCTCACCTTAAAATTAGTGCTTTTAAACTTTATAGTCGCATTATATGAACTTTTTCATTTTTCACCCTCCTTAG
TAGGTGGCAATGATAATAGAAAGCTGCATCCATTAAGCACCACGTGATATACGATCATCACCTTTGTTTGTGTTAAAAGTCCAGCCTGTGCCTGATTTGTACTTGAAGGGTCTTCTGAGAAATAGAGGACCCTTCAGACAGGATTTCTTGGGTTAAACTTCGAGCTGTTAACTACAAGACAAGTTTGTTTGCATAGGCGGTCAGGGTAAAGGTGGTCGGTTTGATAAACATGCCAGCTGTACAAAAGCTTTATAACGCCTGTAAAGCATCACTTTCTACTAATGGACCCATATCAGAAGATGCTCTTGAGAAAGTCCGTTCCCTCTTAGACAAAATCAAGCCTTCTGATGTAGGTCTTGAGCAGGAGGCACAACTTGTCAAGACTTGGAAAGGTACCATGCATGAGCGTAATGGGGGTTTACGACCAATCCTGCCAATCAAATACCTACACTTGCATGAATGTGAGAGCTTCACTATGGGAATATTCTGCATGCCACCTTCTTCAATCATTCCTTTACATAACCACCCTGGGATGACCGTTTTAAGCAAGCTTATATATGGTTCCTTACATGTGAAAGCTTATGATTGGATCGATAGTCCGGGGCCTTCAGTTCCACCCGAAGGTGCAAGACCAGCTAAACTTTTTAAAGATTGTGAGATGACAGCTCCATGTGGAACAACTACTCTCTATCCGACGGCTGGAGGGAATATTCATTGTTTCAAAGCTATAACCCCTTGTGCAATTTTCGATATCCTGTCTCCACCCTACTCTTCTGATGATGGACGTCATTGCACTTATTTCCGAAGGTCTCCTCGAGGGGATCTACCAGGTGAACTCGAGTTCGATGGGGAGATGTTCACAGATGTGACTTGGTTGGAAGAGTTTCAACCTCCTGATGACTTTGTCATCCATCGAGGCCAATACAAGGGTCGTACCATCAAACCATAGGGAATGGTTCATTTTTGGTTCTATTGATCAACTTATTGAATGCAGTGATTAGTTGATTTGGGCGTTATTGAGGTGAAGTTGTTATATGTCTAGACAAATATGGAAATAATATGTTTTCTAGAGAATAGGCCATTTTCTCATGTACATATTATATAACATACATTAATTTAGATCTCACCTTAAAATTAGTGCTTTTAAACTTTATAGTCGCATTATATGAACTTTTTCATTTTTCACCCTCCTTAG
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g007990.2.1 | SL2.50ch10:2145105..2151714 | 240 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g007990.2 | SL2.50ch10:2144877..2151960 | 7,084 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g007990.2.1.1 | SL2.50ch10:2144877..2145205 | 329 | + | n/a |
| exon | exon:Solyc10g007990.2.1.2 | SL2.50ch10:2150234..2150379 | 146 | + | n/a |
| exon | exon:Solyc10g007990.2.1.3 | SL2.50ch10:2150501..2150648 | 148 | + | 2 |
| exon | exon:Solyc10g007990.2.1.4 | SL2.50ch10:2151305..2151511 | 207 | + | n/a |
| exon | exon:Solyc10g007990.2.1.5 | SL2.50ch10:2151596..2151960 | 365 | + | 2 |
| intron | intron:Solyc10g007990.2.1.1 | SL2.50ch10:2145206..2150233 | n/a | + | n/a |
| intron | intron:Solyc10g007990.2.1.2 | SL2.50ch10:2150380..2150500 | n/a | + | n/a |
| intron | intron:Solyc10g007990.2.1.3 | SL2.50ch10:2150649..2151304 | n/a | + | n/a |
| intron | intron:Solyc10g007990.2.1.4 | SL2.50ch10:2151512..2151595 | n/a | + | n/a |
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mRNA details
mRNA details

