Solanum lycopersicum mRNA Solyc10g006990.2.1
 mRNA details
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| Name | Type |
Length
1,944
|
Organism |
|
Description
Poly(A) RNA polymerase protein 1 (AHRD V1 **-- TRF5_YEAST); contains Interpro domain(s) IPR002934 Nucleotidyltransferase
|
|
Location(s)
SL2.50ch10:1395368..1403268
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016779
- Length
- 7901
- Nb exon
- 13
- Sifter term
- GO:0043221
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g006990.2.1 Poly(A) RNA polymerase protein 1 (AHRD V1 **-- TRF5_YEAST); contains Interpro domain(s) IPR002934 Nucleotidyltransferase
GTTAATTCCACGACCGTACTGTTGTGAGGAGACACATTGTGCGGATTTCAGTATCAATGGAAGTTGAGGGCATTTTGTACGAAACTCTCCGTCCACTCTCCGCCGCCGGCACCACCACAACCGCCACCGACGACATACCTCCGTCGTTGTCGTCCTCCGATGAGCATGAACCCTACGTCGTATTCCGGAACCAGATTTCACTATCCAATCTCCAGTGTCCCTCACCGGAAACTGCCGCGCCTGATTACTTTTCACTCGACCTCGATGGAGACGCTTCCGACTTGAATAACGGTTCCGTATCGACGCCGGTACCAGCTGCCACTCCTTTGCGGGATAAAGAAGTAGAGAGAGGACTTGAAGGCAATTGGTTTCGCGCTAATTGTCGGTTTAAGAGTCCCATGCTTCAGCTTCACCAAGAGATAATAGATTTTTGTGAGTTTTTATCACCTACACTGGAGGAGCAAGCATCTCGTAATGAAGCAGTAGAATGTGTTTTTAATGTTATTAAATATATCTGGCCCAACTGCAAGCCAGAGGTCTTTGGATCATTCAAGACAGGGCTTTATCTTCCCACTAGTGATGTTGATCTGGTGATTTTAGGGTCAGAAATTAGAAGTCCTCAAATTGGGTTGCAAGCTCTTTCCAGAGCTCTCTCACAGAAAGGAGTTGCGAAGAAGATACAGGTGATTTCAAAGGCTCGTGTGCCAATAATAAAATTTGTGGAGAAGAAAAGTGGCATTTCATTTGACATAAGCTTTGATGTGGAAAATGGACCCAAAGCTGCTGATTTTATTAAGGATGCTATGTCTAGCTGGCCCCCTCTGCGACCATTATGCTTGATTTTGAAAGTGTTCTTGCAACAGAGAGAGCTAAATGAGGTTTATACTGGTGGGATTGGATCCTATGCTCTGCTTGTAATGCTCATAGCAATGTTGCAGAACCATCGAAATGGCCAAGCTTCTGTGGAGGAGAATCTGGGAATTCTTTTGGTTAATTTCTTTGATATTTATGGACGCAAACTAAATACATCAGATGTTGGTGTATCTTGTAATGGAGAAGCTACCTTCTTCCTGAAGAGTTGCAAAGGGTTCTCAATTAAAGGAAAGCAATCTCTCATCTCCATTGAGGATCCACAGACACCAGAAAATGACATAGGCAAGAGCTCCTTCAATTATTTTCAGGTCAGATCTGCTTTTTCAATGGCTTTCACGACATTGACAAATGCAAAAGCCATATTTGCCCTTGGTCCCAACAGGAGTATACTTGGCACAATAATTAGACCCGATGAAGTACTAGTGGAAAGGAAAGGAGGATCTAATGGGGAAGTGACTTTTACTAACTTGCTCCCAGGCGCTGGGGAGGGACTGCAACAGTATGGTGACCAGCAAGAGATCTACTGTAACTGGCAATTAAATGATAACGAAGAAGCACTCCCCCGAGGAAATGGTATTGCAGAGAATGGTGGTGCTGAATCCTCAGGAAAGAAGAGGAAATCTTCCAAGGATAAACAGCCTGCTAAGAAGGTGAAGGAAAACGGGCATAGCAGTCATATCAGAGATGAAGAGAATTCCTCGAGGAAAGAGAAGAGTTCGAAAAAGCATTGGAAACATAATAGATGGTGATAAAGAACAACATCAATACATATAGTGGTAAGCATTCACCCTACTTGGATGCCTCTACCTGATATTTAACCTATTATACCGACTTATCTATACACTGCAACTCCATTGAGTTTCCGAGATACCTGTTTCTCTAGTGGACTGAATTGACAGTATTTATATGGTGTAGTTCTTTAGCTAGTGGTAGCTACAATATCGACGTGTGAGCTTCCGTATCAAGGTGAAATTGTATTTCACCTTCAGTGTTGTAAAATGCCAATTTTAACAAGAGTGCAACTGCTGCTGTAATTCGAAAAGGGAAAAACTGTTGTAAGACTATTCTTTT
GTTAATTCCACGACCGTACTGTTGTGAGGAGACACATTGTGCGGATTTCAGTATCAATGGAAGTTGAGGGCATTTTGTACGAAACTCTCCGTCCACTCTCCGCCGCCGGCACCACCACAACCGCCACCGACGACATACCTCCGTCGTTGTCGTCCTCCGATGAGCATGAACCCTACGTCGTATTCCGGAACCAGATTTCACTATCCAATCTCCAGTGTCCCTCACCGGAAACTGCCGCGCCTGATTACTTTTCACTCGACCTCGATGGAGACGCTTCCGACTTGAATAACGGTTCCGTATCGACGCCGGTACCAGCTGCCACTCCTTTGCGGGATAAAGAAGTAGAGAGAGGACTTGAAGGCAATTGGTTTCGCGCTAATTGTCGGTTTAAGAGTCCCATGCTTCAGCTTCACCAAGAGATAATAGATTTTTGTGAGTTTTTATCACCTACACTGGAGGAGCAAGCATCTCGTAATGAAGCAGTAGAATGTGTTTTTAATGTTATTAAATATATCTGGCCCAACTGCAAGCCAGAGGTCTTTGGATCATTCAAGACAGGGCTTTATCTTCCCACTAGTGATGTTGATCTGGTGATTTTAGGGTCAGAAATTAGAAGTCCTCAAATTGGGTTGCAAGCTCTTTCCAGAGCTCTCTCACAGAAAGGAGTTGCGAAGAAGATACAGGTGATTTCAAAGGCTCGTGTGCCAATAATAAAATTTGTGGAGAAGAAAAGTGGCATTTCATTTGACATAAGCTTTGATGTGGAAAATGGACCCAAAGCTGCTGATTTTATTAAGGATGCTATGTCTAGCTGGCCCCCTCTGCGACCATTATGCTTGATTTTGAAAGTGTTCTTGCAACAGAGAGAGCTAAATGAGGTTTATACTGGTGGGATTGGATCCTATGCTCTGCTTGTAATGCTCATAGCAATGTTGCAGAACCATCGAAATGGCCAAGCTTCTGTGGAGGAGAATCTGGGAATTCTTTTGGTTAATTTCTTTGATATTTATGGACGCAAACTAAATACATCAGATGTTGGTGTATCTTGTAATGGAGAAGCTACCTTCTTCCTGAAGAGTTGCAAAGGGTTCTCAATTAAAGGAAAGCAATCTCTCATCTCCATTGAGGATCCACAGACACCAGAAAATGACATAGGCAAGAGCTCCTTCAATTATTTTCAGGTCAGATCTGCTTTTTCAATGGCTTTCACGACATTGACAAATGCAAAAGCCATATTTGCCCTTGGTCCCAACAGGAGTATACTTGGCACAATAATTAGACCCGATGAAGTACTAGTGGAAAGGAAAGGAGGATCTAATGGGGAAGTGACTTTTACTAACTTGCTCCCAGGCGCTGGGGAGGGACTGCAACAGTATGGTGACCAGCAAGAGATCTACTGTAACTGGCAATTAAATGATAACGAAGAAGCACTCCCCCGAGGAAATGGTATTGCAGAGAATGGTGGTGCTGAATCCTCAGGAAAGAAGAGGAAATCTTCCAAGGATAAACAGCCTGCTAAGAAGGTGAAGGAAAACGGGCATAGCAGTCATATCAGAGATGAAGAGAATTCCTCGAGGAAAGAGAAGAGTTCGAAAAAGCATTGGAAACATAATAGATGGTGATAAAGAACAACATCAATACATATAGTGGTAAGCATTCACCCTACTTGGATGCCTCTACCTGATATTTAACCTATTATACCGACTTATCTATACACTGCAACTCCATTGAGTTTCCGAGATACCTGTTTCTCTAGTGGACTGAATTGACAGTATTTATATGGTGTAGTTCTTTAGCTAGTGGTAGCTACAATATCGACGTGTGAGCTTCCGTATCAAGGTGAAATTGTATTTCACCTTCAGTGTTGTAAAATGCCAATTTTAACAAGAGTGCAACTGCTGCTGTAATTCGAAAAGGGAAAAACTGTTGTAAGACTATTCTTTT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g006990.2.1 | SL2.50ch10:1395689..1403212 | 522 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g006990.2 | SL2.50ch10:1395368..1403268 | 7,901 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g006990.2.1.1 | SL2.50ch10:1402852..1403268 | 417 | - | 2 |
| exon | exon:Solyc10g006990.2.1.10 | SL2.50ch10:1397394..1397491 | 98 | - | 1 |
| exon | exon:Solyc10g006990.2.1.11 | SL2.50ch10:1397246..1397294 | 49 | - | n/a |
| exon | exon:Solyc10g006990.2.1.12 | SL2.50ch10:1396858..1396902 | 45 | - | n/a |
| exon | exon:Solyc10g006990.2.1.13 | SL2.50ch10:1395368..1396130 | 763 | - | n/a |
| exon | exon:Solyc10g006990.2.1.2 | SL2.50ch10:1402376..1402488 | 113 | - | n/a |
| exon | exon:Solyc10g006990.2.1.3 | SL2.50ch10:1402209..1402265 | 57 | - | n/a |
| exon | exon:Solyc10g006990.2.1.4 | SL2.50ch10:1400943..1401038 | 96 | - | n/a |
| exon | exon:Solyc10g006990.2.1.5 | SL2.50ch10:1400743..1400813 | 71 | - | 1 |
| exon | exon:Solyc10g006990.2.1.6 | SL2.50ch10:1399952..1399994 | 43 | - | n/a |
| exon | exon:Solyc10g006990.2.1.7 | SL2.50ch10:1399779..1399859 | 81 | - | n/a |
| exon | exon:Solyc10g006990.2.1.8 | SL2.50ch10:1399541..1399600 | 60 | - | n/a |
| exon | exon:Solyc10g006990.2.1.9 | SL2.50ch10:1398706..1398756 | 51 | - | n/a |
| intron | intron:Solyc10g006990.2.1.10 | SL2.50ch10:1397492..1398705 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.11 | SL2.50ch10:1397295..1397393 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.12 | SL2.50ch10:1396903..1397245 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.13 | SL2.50ch10:1396131..1396857 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.2 | SL2.50ch10:1402489..1402851 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.3 | SL2.50ch10:1402266..1402375 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.4 | SL2.50ch10:1401039..1402208 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.5 | SL2.50ch10:1400814..1400942 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.6 | SL2.50ch10:1399995..1400742 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.7 | SL2.50ch10:1399860..1399951 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.8 | SL2.50ch10:1399601..1399778 | n/a | - | n/a |
| intron | intron:Solyc10g006990.2.1.9 | SL2.50ch10:1398757..1399540 | n/a | - | n/a |
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