Solanum lycopersicum mRNA Solyc10g005760.1.1
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Name | Type | Organism | |
Synonyms / aliases
mRNA:Solyc10g005760.1.1
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Length
1,011
|
Description
MYB transcription factor (AHRD V1 *--- Q9LDR8_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
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Location(s)
SL2.50ch10:612159..614054
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Ontology term(s) |
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0003677
- GO:0045449
- Length
- 1896
![]() | spliced mRNA sequence, including UTRs |
>Solyc10g005760.1.1 MYB transcription factor (AHRD V1 *--- Q9LDR8_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
ATGGGAAGAATTCCATGTTGTGAAAAGGACAATGTTAAGAGAGGGCAATGGACTCCTGAGGAAGATCACAAACTTTCATCTTACATTGCTCAACATGGAACTCGTAATTGGCGTCTCATTCCTAAACATGCTGGATTACAAAGATGTGGAAAAAGTTGTAGATTGAGATGGACAAATTACCTTAGGCCTGATCTCAAACATGGCCAATTTTCAGAGGCAGAAGAACAGACCATTGTCACACTTCACTCTGTTCTTGGCAATAGATGGTCTGTGATAGCTGCTCAACTTCCCGGTAGAACAGACAATGACGTGAAGAACCATTGGAACACAAAGCTCAAAAAGAAATTATCTGGTATGGGAATTGATCCAGTAACACACAAGCCATTTTCACACTTAATAAGTGAAATTGCAACAACATTATCTCCACCACAAGTCCCTCATTTGGCTGAAGCAGCACTTGGTTGTTTCAAAGATGAAATGCTTCATCTTTTAACCAAAAAAAGAATTGGTTTTCAGTTTCATACACAATTCACAAATATGACAAGTACTCATAATAATGCACCAAGTACAAGTCATGTTAAGCATGAGGAGAATAATAATTATAAAGATAATAACACAATTGAGAAAATTAAGTATGGATTATCAAGAGCTATTAAAGAAAGTGATAAGAATTGGGAAACAAGTGTAGGAGGAACAACATCTAGTAATTTTCATGATAATGGAGGATTTAGTAACTATAATTTTGCTAATTTGCTTAATGATGAAGATGGTTCACCATGGAATCAAAGTTTGTGTAGTGGAAGTACATGCACAGCAGGCGGAGGCGGAGGCGAATTACAACAACAGCAGCAGCAACAACAACAACAGAACAAGAAAATTAGCAATGATAATTGTGAGGATAGTGGTAAAGAAATAGTAGTAACAACAAGAAATGGATCAACAACTATGTTCAATACTGACTGTGTTTTGTGGGACATATCATCTGATGATCTAATGAATCCAATGGTTTGA
ATGGGAAGAATTCCATGTTGTGAAAAGGACAATGTTAAGAGAGGGCAATGGACTCCTGAGGAAGATCACAAACTTTCATCTTACATTGCTCAACATGGAACTCGTAATTGGCGTCTCATTCCTAAACATGCTGGATTACAAAGATGTGGAAAAAGTTGTAGATTGAGATGGACAAATTACCTTAGGCCTGATCTCAAACATGGCCAATTTTCAGAGGCAGAAGAACAGACCATTGTCACACTTCACTCTGTTCTTGGCAATAGATGGTCTGTGATAGCTGCTCAACTTCCCGGTAGAACAGACAATGACGTGAAGAACCATTGGAACACAAAGCTCAAAAAGAAATTATCTGGTATGGGAATTGATCCAGTAACACACAAGCCATTTTCACACTTAATAAGTGAAATTGCAACAACATTATCTCCACCACAAGTCCCTCATTTGGCTGAAGCAGCACTTGGTTGTTTCAAAGATGAAATGCTTCATCTTTTAACCAAAAAAAGAATTGGTTTTCAGTTTCATACACAATTCACAAATATGACAAGTACTCATAATAATGCACCAAGTACAAGTCATGTTAAGCATGAGGAGAATAATAATTATAAAGATAATAACACAATTGAGAAAATTAAGTATGGATTATCAAGAGCTATTAAAGAAAGTGATAAGAATTGGGAAACAAGTGTAGGAGGAACAACATCTAGTAATTTTCATGATAATGGAGGATTTAGTAACTATAATTTTGCTAATTTGCTTAATGATGAAGATGGTTCACCATGGAATCAAAGTTTGTGTAGTGGAAGTACATGCACAGCAGGCGGAGGCGGAGGCGAATTACAACAACAGCAGCAGCAACAACAACAACAGAACAAGAAAATTAGCAATGATAATTGTGAGGATAGTGGTAAAGAAATAGTAGTAACAACAAGAAATGGATCAACAACTATGTTCAATACTGACTGTGTTTTGTGGGACATATCATCTGATGATCTAATGAATCCAATGGTTTGA
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc10g005760.1.1 | SL2.50ch10:612158..614054 | 337 | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc10g005760.1 | SL2.50ch10:612159..614054 | 1,896 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc10g005760.1.1.1 | SL2.50ch10:613922..614054 | 133 | - | n/a |
exon | exon:Solyc10g005760.1.1.2 | SL2.50ch10:613421..613550 | 130 | - | 2 |
exon | exon:Solyc10g005760.1.1.3 | SL2.50ch10:612159..612906 | 748 | - | 1 |
intron | intron:Solyc10g005760.1.1.2 | SL2.50ch10:613551..613921 | n/a | - | n/a |
intron | intron:Solyc10g005760.1.1.3 | SL2.50ch10:612907..613420 | n/a | - | n/a |
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