Solanum lycopersicum mRNA Solyc09g098580.2.1
 mRNA details
|
| Name | Type |
Length
2,878
|
Organism |
|
Description
GTP pyrophosphokinase (AHRD V1 *-** Q3A9Z8_CARHZ); contains Interpro domain(s) IPR007685 RelA/SpoT
|
|
Location(s)
SL2.50ch09:72365584..72377841
|
| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0015969
- GO:0003824
- Length
- 12258
- Nb exon
- 24
- Sifter term
- GO:0008728
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc09g098580.2.1 GTP pyrophosphokinase (AHRD V1 *-** Q3A9Z8_CARHZ); contains Interpro domain(s) IPR007685 RelA/SpoT
ATGGCTTTTGCTACTTCAATGTCAGTTTCTATCGAATGTATGAATATATGTAAGTCTTGGAAAGGAGATGTGAGTGGAAGACTCGACTGTAGTGTGTTATCTTGTGCCTGGAAGGCGCCAAGGGCCTTGACTGGGTTCCTTGCCAGCACAACTCATCCTTCTCAGTGTTCCTCTACTCCTTTTGAGCGATATGGAAGAACAGATCGTCTCCGCCGATGTAGATGTTATACTTCTGATATGGATGAACGCTACCCTGTTGAAGTTCTGCGAGGAGTCCCTGGCTCAATGCTTCTACTATCTGCTTCTAGCAACTGGAAATTGTGTTGCTCTTCATCATTTTCTTCAGAGTCATTTGAAGAGATATCTCCTGAAAGTTTGTGGGAGGATCTTAAACCTACTATTTCATATCTTTCTTGCAAGGAATTGGAATTGGTTAATAAGGCTTTGAATCTTGCTTTTGAGGCACATGATGGTCAAAAGCGTCGTAGTGGAGAGCCCTTCATTATTCACCCAATTGCAGTTGCACAGATCCTTGGACAGCTTGAATTGGATTGGGAGTCGGTTGCTGCTGGGCTATTACATGATACTGTAGAAGACACAGATGTAGTTACTTTTGAAAGAATAGAGAAGGAATTTGGTGCAACTGTTCGCCGTATTGTTGAAGGGGAGACTAAGGTATCCAAGCTGGGAAAGATCAAGTGCAAGGATGAAAGCCATGTACAGGATGTCAAAGCTGATGACCTTAGGCAAATGTTTCTTTCCATGACAGAGGAGGTCCGTGTTATAATTGTCAAATTAGCTGATAGATTACATAACATGCGCACTCTTTCACATATGCCTCCACACAAGCAGTCTGGAATAGCAACAGAGACGCTGCAGGTTTTTGCTCCTTTGGCAAAACTTCTCGGAATATACCAAATCAAGTCAGAGCTTGAAAACTTGGCATTTATGTATACAAATGCTCAAGACTATGCCAGGGTGCAGCGCAGAATTGCAGAACTTCATAAAGAACATGAAAAGGAACTCAAAGAGGCAAAAAGAATATTGATGAAGAAAATAGAGGAGGACCAATTCCTAGAACTTGTGACTGTGATGACGGAAATTCAATCAATATGCAAGGAACCTTACAGCATCTACAAAGCAGTACTCAAATCTAAGAGTTCAATAAAAGAAGTAAACCAAATTGCACAGCTTCGAATTATTATAAAACCAAAGCCTTGTGTCGGAGTTAGGCCCCTTTGCAGTGCACAGCAGATATGCTATCATCTGCTTGGACTAGTACATGGAATCTGGACACCTATCCCTCGTGCTATGAAAGACTACATTGCCACTCCAAAGCCTAACGGCTATCAAAGTCTTCATACAACGGTGATTCCATTTCTTTATGAGAGCATGTTTCGTTTAGAGGTTCAGATTAGAACTGAAGAGATGGACCTCATAGCTGAGAGAGGCATTGCTGCACACTACAGTGGGAAAGGTTTTGTAAATGGTTTAGTTGGGCATGTTATAACCAATGATAAAAATTCTGGAGGGAAAATAGTCTGCCTTAACAATGCCAATATTGCTCTCAGGATTGGCTGGCTGAATGCAATTAGGGAGTGGCAAGAAGAGTTCGTTGGAAACATGAGTTCTAGGGAATTTGTGGACACTATTACCAGAGATCTGTTGGGCAGTCGTGTCTTTGTGTTTACACCTGGAGGAGAGATAAAACATCTCCCAAAGGGGGCTACTGTCATTGATTATGCGTATATGATACACACTGAAATTGGCAATAAAATGGTGGCTGCTAAGGTGAATGGTAATCTTATCAAGCCAATGCATGTACTTGCAAACGCAGAAGTTGTAGAGATTATCACTTACAATGGTCTCTCTAGCAAGTCTGCTTTCGAGAGACACAAACAGTGGCTTCAACATGCGAAAACTCGTTGTGCCCGACACAAAATTATGAAATTTTTGAGAGAGCAAGCTGCACTATCAGCATCTGAGATAACTGTGGATTCAGTTAAGGAATTTGCAGCTGAGTCTGAAGGGGATAGCACAGTGGAAAAATTAGCAGATTACTCTGAGGGAACCAAACATTCGTGGGAGAAAATCCTCAAAAATGTTATGGATGTATTATCTGCAAGGATGAGTGGTGAAAATATTTTCCAACTCCGTAGTGGTAGTATTCAAATTCCCAAGGTAAATGGGAAACATAATAAGTGCATGCAGCATACAAATTTGAAGGCCACAGGGGAGACATTGTCACAAGGAAATGGTGTTGGCGAAATGATACTTGCTAACATACCAAGGTACAGGGATGTTCTGCCTGGATTAGACGGCTGGATGGCTAGCAAAGTTGCAACTTGGCAAAACCTGGAAGGGCACTCTGTTCAGTGGTTTTGTGTTGTCAGCATAGATCGAAAAGGCATGATGGCCGATATTACTTCAGCATTGGCAGCTGTAGGCGTCATCATATGTTCTTGTGCGGCTGAGACGGATAGAGGGAAGGGAATCGGTGTCGCGCTATTTCATATTGAAGCCAACCTAGAGAGCTTGGTTGGTGCAAGTTCGAGGATTGACATGATCCTGGGTGTTTTGGGATGGTCCACGGGCTGCAGTTGGTCAGAGAACAAACAGTTTCTAGAATGCTAATTTAGTGGCCTGGTGAAGAGTAGTTGCCCAGCTGTTGAATGCTTGGGGAAGAAAGTTTTGTTCAGTGAAACCTGAGTTCTGTTTGACAAGTATAGAAGCAAGCAATATAGGTTATATGGTGTAGGGCGACTGTATATAAAGGAAGAGTAGCAACCAGTTATACTTGTAAAGGAATTTTCAACTATACGAACTCCAACAAAAGTATGTTACAGTTATACAAAATAAATATATTAAATTATTTGTC
ATGGCTTTTGCTACTTCAATGTCAGTTTCTATCGAATGTATGAATATATGTAAGTCTTGGAAAGGAGATGTGAGTGGAAGACTCGACTGTAGTGTGTTATCTTGTGCCTGGAAGGCGCCAAGGGCCTTGACTGGGTTCCTTGCCAGCACAACTCATCCTTCTCAGTGTTCCTCTACTCCTTTTGAGCGATATGGAAGAACAGATCGTCTCCGCCGATGTAGATGTTATACTTCTGATATGGATGAACGCTACCCTGTTGAAGTTCTGCGAGGAGTCCCTGGCTCAATGCTTCTACTATCTGCTTCTAGCAACTGGAAATTGTGTTGCTCTTCATCATTTTCTTCAGAGTCATTTGAAGAGATATCTCCTGAAAGTTTGTGGGAGGATCTTAAACCTACTATTTCATATCTTTCTTGCAAGGAATTGGAATTGGTTAATAAGGCTTTGAATCTTGCTTTTGAGGCACATGATGGTCAAAAGCGTCGTAGTGGAGAGCCCTTCATTATTCACCCAATTGCAGTTGCACAGATCCTTGGACAGCTTGAATTGGATTGGGAGTCGGTTGCTGCTGGGCTATTACATGATACTGTAGAAGACACAGATGTAGTTACTTTTGAAAGAATAGAGAAGGAATTTGGTGCAACTGTTCGCCGTATTGTTGAAGGGGAGACTAAGGTATCCAAGCTGGGAAAGATCAAGTGCAAGGATGAAAGCCATGTACAGGATGTCAAAGCTGATGACCTTAGGCAAATGTTTCTTTCCATGACAGAGGAGGTCCGTGTTATAATTGTCAAATTAGCTGATAGATTACATAACATGCGCACTCTTTCACATATGCCTCCACACAAGCAGTCTGGAATAGCAACAGAGACGCTGCAGGTTTTTGCTCCTTTGGCAAAACTTCTCGGAATATACCAAATCAAGTCAGAGCTTGAAAACTTGGCATTTATGTATACAAATGCTCAAGACTATGCCAGGGTGCAGCGCAGAATTGCAGAACTTCATAAAGAACATGAAAAGGAACTCAAAGAGGCAAAAAGAATATTGATGAAGAAAATAGAGGAGGACCAATTCCTAGAACTTGTGACTGTGATGACGGAAATTCAATCAATATGCAAGGAACCTTACAGCATCTACAAAGCAGTACTCAAATCTAAGAGTTCAATAAAAGAAGTAAACCAAATTGCACAGCTTCGAATTATTATAAAACCAAAGCCTTGTGTCGGAGTTAGGCCCCTTTGCAGTGCACAGCAGATATGCTATCATCTGCTTGGACTAGTACATGGAATCTGGACACCTATCCCTCGTGCTATGAAAGACTACATTGCCACTCCAAAGCCTAACGGCTATCAAAGTCTTCATACAACGGTGATTCCATTTCTTTATGAGAGCATGTTTCGTTTAGAGGTTCAGATTAGAACTGAAGAGATGGACCTCATAGCTGAGAGAGGCATTGCTGCACACTACAGTGGGAAAGGTTTTGTAAATGGTTTAGTTGGGCATGTTATAACCAATGATAAAAATTCTGGAGGGAAAATAGTCTGCCTTAACAATGCCAATATTGCTCTCAGGATTGGCTGGCTGAATGCAATTAGGGAGTGGCAAGAAGAGTTCGTTGGAAACATGAGTTCTAGGGAATTTGTGGACACTATTACCAGAGATCTGTTGGGCAGTCGTGTCTTTGTGTTTACACCTGGAGGAGAGATAAAACATCTCCCAAAGGGGGCTACTGTCATTGATTATGCGTATATGATACACACTGAAATTGGCAATAAAATGGTGGCTGCTAAGGTGAATGGTAATCTTATCAAGCCAATGCATGTACTTGCAAACGCAGAAGTTGTAGAGATTATCACTTACAATGGTCTCTCTAGCAAGTCTGCTTTCGAGAGACACAAACAGTGGCTTCAACATGCGAAAACTCGTTGTGCCCGACACAAAATTATGAAATTTTTGAGAGAGCAAGCTGCACTATCAGCATCTGAGATAACTGTGGATTCAGTTAAGGAATTTGCAGCTGAGTCTGAAGGGGATAGCACAGTGGAAAAATTAGCAGATTACTCTGAGGGAACCAAACATTCGTGGGAGAAAATCCTCAAAAATGTTATGGATGTATTATCTGCAAGGATGAGTGGTGAAAATATTTTCCAACTCCGTAGTGGTAGTATTCAAATTCCCAAGGTAAATGGGAAACATAATAAGTGCATGCAGCATACAAATTTGAAGGCCACAGGGGAGACATTGTCACAAGGAAATGGTGTTGGCGAAATGATACTTGCTAACATACCAAGGTACAGGGATGTTCTGCCTGGATTAGACGGCTGGATGGCTAGCAAAGTTGCAACTTGGCAAAACCTGGAAGGGCACTCTGTTCAGTGGTTTTGTGTTGTCAGCATAGATCGAAAAGGCATGATGGCCGATATTACTTCAGCATTGGCAGCTGTAGGCGTCATCATATGTTCTTGTGCGGCTGAGACGGATAGAGGGAAGGGAATCGGTGTCGCGCTATTTCATATTGAAGCCAACCTAGAGAGCTTGGTTGGTGCAAGTTCGAGGATTGACATGATCCTGGGTGTTTTGGGATGGTCCACGGGCTGCAGTTGGTCAGAGAACAAACAGTTTCTAGAATGCTAATTTAGTGGCCTGGTGAAGAGTAGTTGCCCAGCTGTTGAATGCTTGGGGAAGAAAGTTTTGTTCAGTGAAACCTGAGTTCTGTTTGACAAGTATAGAAGCAAGCAATATAGGTTATATGGTGTAGGGCGACTGTATATAAAGGAAGAGTAGCAACCAGTTATACTTGTAAAGGAATTTTCAACTATACGAACTCCAACAAAAGTATGTTACAGTTATACAAAATAAATATATTAAATTATTTGTC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc09g098580.2.1 | SL2.50ch09:72365583..72377597 | 878 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc09g098580.2 | SL2.50ch09:72365584..72377841 | 12,258 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc09g098580.2.1.1 | SL2.50ch09:72365584..72365608 | 25 | + | n/a |
| exon | exon:Solyc09g098580.2.1.10 | SL2.50ch09:72370213..72370320 | 108 | + | n/a |
| exon | exon:Solyc09g098580.2.1.11 | SL2.50ch09:72370513..72370610 | 98 | + | n/a |
| exon | exon:Solyc09g098580.2.1.12 | SL2.50ch09:72372420..72372480 | 61 | + | 1 |
| exon | exon:Solyc09g098580.2.1.13 | SL2.50ch09:72372573..72372635 | 63 | + | n/a |
| exon | exon:Solyc09g098580.2.1.14 | SL2.50ch09:72373116..72373172 | 57 | + | n/a |
| exon | exon:Solyc09g098580.2.1.15 | SL2.50ch09:72373260..72373361 | 102 | + | n/a |
| exon | exon:Solyc09g098580.2.1.16 | SL2.50ch09:72373694..72373852 | 159 | + | n/a |
| exon | exon:Solyc09g098580.2.1.17 | SL2.50ch09:72373955..72374086 | 132 | + | n/a |
| exon | exon:Solyc09g098580.2.1.18 | SL2.50ch09:72374175..72374261 | 87 | + | n/a |
| exon | exon:Solyc09g098580.2.1.19 | SL2.50ch09:72374382..72374453 | 72 | + | n/a |
| exon | exon:Solyc09g098580.2.1.2 | SL2.50ch09:72366301..72366494 | 194 | + | 2 |
| exon | exon:Solyc09g098580.2.1.20 | SL2.50ch09:72375273..72375359 | 87 | + | n/a |
| exon | exon:Solyc09g098580.2.1.21 | SL2.50ch09:72375443..72375899 | 457 | + | n/a |
| exon | exon:Solyc09g098580.2.1.22 | SL2.50ch09:72376586..72376647 | 62 | + | 2 |
| exon | exon:Solyc09g098580.2.1.23 | SL2.50ch09:72377351..72377419 | 69 | + | n/a |
| exon | exon:Solyc09g098580.2.1.24 | SL2.50ch09:72377502..72377841 | 340 | + | n/a |
| exon | exon:Solyc09g098580.2.1.3 | SL2.50ch09:72368030..72368194 | 165 | + | n/a |
| exon | exon:Solyc09g098580.2.1.4 | SL2.50ch09:72368655..72368720 | 66 | + | n/a |
| exon | exon:Solyc09g098580.2.1.5 | SL2.50ch09:72368898..72368990 | 93 | + | n/a |
| exon | exon:Solyc09g098580.2.1.6 | SL2.50ch09:72369070..72369201 | 132 | + | n/a |
| exon | exon:Solyc09g098580.2.1.7 | SL2.50ch09:72369327..72369425 | 99 | + | n/a |
| exon | exon:Solyc09g098580.2.1.8 | SL2.50ch09:72369500..72369577 | 78 | + | n/a |
| exon | exon:Solyc09g098580.2.1.9 | SL2.50ch09:72369658..72369729 | 72 | + | n/a |
| intron | intron:Solyc09g098580.2.1.1 | SL2.50ch09:72365609..72366300 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.10 | SL2.50ch09:72370321..72370512 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.11 | SL2.50ch09:72370611..72372419 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.12 | SL2.50ch09:72372481..72372572 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.13 | SL2.50ch09:72372636..72373115 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.14 | SL2.50ch09:72373173..72373259 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.15 | SL2.50ch09:72373362..72373693 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.16 | SL2.50ch09:72373853..72373954 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.17 | SL2.50ch09:72374087..72374174 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.18 | SL2.50ch09:72374262..72374381 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.19 | SL2.50ch09:72374454..72375272 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.2 | SL2.50ch09:72366495..72368029 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.20 | SL2.50ch09:72375360..72375442 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.21 | SL2.50ch09:72375900..72376585 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.22 | SL2.50ch09:72376648..72377350 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.23 | SL2.50ch09:72377420..72377501 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.3 | SL2.50ch09:72368195..72368654 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.4 | SL2.50ch09:72368721..72368897 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.5 | SL2.50ch09:72368991..72369069 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.6 | SL2.50ch09:72369202..72369326 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.7 | SL2.50ch09:72369426..72369499 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.8 | SL2.50ch09:72369578..72369657 | n/a | + | n/a |
| intron | intron:Solyc09g098580.2.1.9 | SL2.50ch09:72369730..72370212 | n/a | + | n/a |
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