Sol Genomics Network

Solanum lycopersicum gene Solyc09g098220.2

Name Solyc09g098220.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc09g098220	Length 1,563

Description

Mitotic spindle checkpoint component mad2 (AHRD V1 ***- MAD2_SCHPO); contains Interpro domain(s) IPR003511 DNA-binding HORMA

Location(s)

SL2.50ch09:72075380..72076942

GFF source

ITAG_eugene

From BOGAS: 1

Length: 1563

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc09g098220.2.1	SL2.50ch09:72075380..72076942	967	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc09g098220.2 SL2.50ch09:72075380..72076942
ATGGATCGCAATCGAAGTCCACAAGGTTGGTGTATTCTTATACAGGTTCTGATATGCTGATTCAAAGCTTTTTTTCATCAGTGTGTTTAGCAAGGAGAGAGGTTACCTTCAATGTGAAATTGCAGGTGAAACTGCCCAGATTCTTGTAGAATTCTTAGAAGTTGCCATTACGTCAGTTGTGTTCCTCAAAGGAGTTTACCCAAGTGGTAAAAGAAAAATTACCGGCAATTCAGAGCTCTATTTTACTGCTTAAGCTAGAAAACCTCTGAATTGGATCTTGTTCTATGAAGGGGCTTTTGAAAGGCGGCGTTACATGAATGTTGTGGTTCAAAGAGCTAGACACCCGGAGCTTCAACAATATATCCATTCTTCTGTCAATGGACTTCTTCCTTTCATACAAAAGGTGTATTGCATTTCTTTTCAACAGTCCTATAATAGTTAATTGGTCATCTTGGGTACTGGAGCTAATGTGTGAATTGACATTTCTAACTTCCCCCTTCCTCTCGCCACATTGTCCCCCCTTTTTCCTCAGGGGAAAAAACAGAGGAACTTTTTGACATGTCCTTAAACTTATAACAATTTATTGATCTTGTTTATCAGACAAATGCTATTGCTTTTGCAAGGGAAATGAGAGATTGGCACTATAGGCTGTCATTCTTGTGCTATTGTTGTTCTTCAAAAGTAATCATGTTTCTTTTCCTACAGGGATTAGTTGAGAGAGTGGCGGTGATTTTTTCTGGTAGCAACAATGTACCTATCGAGAGATTTGTTTTCAAGATAAATGTAAACCAATCCTATGGTTCAAAGTTGGAGGAAGCTGATCTGGCGTTCTCTCTTAAATCATTTTTGATCAAGCTTCCATTGTCCCAATCGTTAATGAAGGTTCTTCCACCAGGTAAGCTAATTAGGAACTTTATATCAAACGGCACTATAAATCTTCTTAGCTTTTGCAATTAGCCTTTGTGAGAATTCGAAGTGGTTTCCTCAACTTGTTAGCTTTGATAGATTGCAGGTGGGAGATAACAGCTTACTTCCGCTCTCTCCCGCAGAGTGGTACCAGCAAAGATGCCGAAATTTGGGTCCCAACAGATACACAGCAGTGGCAGCAAGCACCTCTTATAACTCCTATTAAGTCCATGAGTAGTGAACCTCTAGGTGTCCAGCTATATCTTGAACATCCAAGTCTCTCTGAACCAAAGGCTTAGAAGGAGGTCATCTCAGAGGCATTTGTCATGGATCTCTTCCAACAGAATTAGTAAAGGCGTGCCAATATCTTATCCTGGTGTGGTTCCTGACATCTTCCCACTTCTCATACCGTTCTCTTTTCAACCATCAACTATTCGAAACTCACTTGCCTGACTAATCTGGATACAGCCAAGTTTTCATATCCTGCAGTGGATATAGTATATCAAGGTAGATTTGGGCATATCTGGGGGCATCAATTATGCACAGAGACTCAAATAAAACATAGTTAGGTCACCAGATTATCTTGTAAAGCTTCATTTCCTTACAATTACATAGAGTAGTATTTAAGCTGGTTGGCCATCATTCTATTCAAAAAGT

Download sequence region

Download sequence (1.6Kb)

Get flanking sequences on SL2.50ch09

mRNA Solyc09g098220.2.1

Ontology terms

terms associated with this mRNA

GO:0005515 – protein binding

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc09g098220.2.1	SL2.50ch09:72075379..72076584	203	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc09g098220.2	SL2.50ch09:72075380..72076942	1,563	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc09g098220.2.1.1	SL2.50ch09:72075380..72075404	25	+	n/a
exon	exon:Solyc09g098220.2.1.2	SL2.50ch09:72075505..72075585	81	+	2
exon	exon:Solyc09g098220.2.1.3	SL2.50ch09:72075670..72075782	113	+	2
exon	exon:Solyc09g098220.2.1.4	SL2.50ch09:72076085..72076274	190	+	n/a
exon	exon:Solyc09g098220.2.1.5	SL2.50ch09:72076385..72076942	558	+	2
intron	intron:Solyc09g098220.2.1.1	SL2.50ch09:72075405..72075504	n/a	+	n/a
intron	intron:Solyc09g098220.2.1.2	SL2.50ch09:72075586..72075669	n/a	+	n/a
intron	intron:Solyc09g098220.2.1.3	SL2.50ch09:72075783..72076084	n/a	+	n/a
intron	intron:Solyc09g098220.2.1.4	SL2.50ch09:72076275..72076384	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc09g098220

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17942231%2Fdetails feature 17942231

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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