Solanum lycopersicum mRNA Solyc09g091440.2.1

mRNA details  
Name
Solyc09g091440.2.1
Type
mRNA
Length
1,832
Organism
Solanum lycopersicum
Description
Histone deacetylase (AHRD V1 ***- B9MZ37_POPTR); contains Interpro domain(s) IPR003084 Histone deacetylase
Location(s)
SL2.50ch09:70723399..70729325
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0016575
Length
5927
Nb exon
8
Sifter term
GO:0003714
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g091440.2.1 Histone deacetylase (AHRD V1 ***- B9MZ37_POPTR); contains Interpro domain(s) IPR003084 Histone deacetylase

TGAAGACATAAATATATTTTACATCTGGTTTTTTCTTCTCTACTCAACCTTTAGCGATCTCTACTGTAGTGGCCGCTTCTTCTGGTTTTCACTTTCAGGTTTATCCTTACTGGTTTATAGCTTGGGAAATGGATGTTGGAGGAAACTCCTTAGCATCTGGTGCAGATGGAAAGAAGAGAAAAGTAAGTTATTTCTATGATCCTGAAGTTGGTAATTACTATTATGGACAAGGCCATCCAATGAAGCCACATAGAATGCGGATGACACATGCTCTTCTTGCCCACTATGGTCTATTACAACACATGCATGTTCTGAAGCCAAATCCTGCTAGAGATAAGGATCTCTGTAGGTTTCATGCTGATGATTATATTGCTTTCTTGAGAAGCGTAACACCAGAAACACAGCAAGATCAGCTGAGGCAGCTGAAGAGGTTCAATGTCGGGGAGGACTGTCCAGTTTTTGATGGTCTTTATTCCTTCTGCCAAACCTACGCTGGAGGTTCTGTTGGTGGGGCAGTTAAGTTGAACCATGGACACTGTGATATCGCTGTAAATTGGGCTGGTGGATTGCATCATGCCAAGAAATGTGAAGCATCTGGTTTCTGCTATGTGAACGATATCGTGTTGGCTATTCTGGAGCTACTCAAAGTCCATGAGAGAGTATTGTATGTGGATATTGATATCCATCATGGTGATGGCGTGGAAGAGGCCTTCTATACTACAGATAGGGTCATGACAGTTTCCTTTCATAAATTTGGAGATTACTTTCCTGGTACAGGGGATGTACGTGATATTGGTTATGGAAGTGGAAAATACTACTCTCTAAATGTTCCACTAGATGATGGAATTGATGATGAGAGCTATCAGTCCCTCTTTAAGCCTATTATGGGCAAAGTGATGGAAGTTTTTAAGCCTGGTGCTGTGGTTTTGCAATGTGGTGCAGATTCCTTGTCTGGCGATCGGCTAGGCTGCTTTAATCTCTCTATTAAAGGTCATGCTGAATGTGTCAAGTACATGAGGTCTTTCAATGTGCCATTGTTGTTGCTTGGTGGAGGCGGCTACACAATACGTAATGTTGCTCGTTGCTGGTGTTACGAAACAGGAGTTGCATTAGGAATAGAGCTTGAAGATAAGATGCCGCAACATGAATATTATGAATACTTTGGTCCAGATTATACCTTGCATGTCGCTCCAAGTAACATGGAGAACAAAAATTCTCGTCAGATTTTAGAAGATATAAGATCAAAGCTGCTTGATAATCTTTCAAAGCTTCAGCATGCCCCAAGTGTGCAGTTCCAGGAGCGACCACCGGATACTGAATTGCCTGAGGCTGATGAAGATCTAGAGGATGCAGATTCAAGATGGGATGCTGATTCTGACACAAATGGCGAAGAACGTAAGCCCAATCCTAGCAGAGTGAGGAGGGAACATGTTGAACCTGAAGGAAAAGGCACGGACGATATGAAAACAGAAGAGCACCTAAGAGAAGTAGAATCGACATTCGCAGAGTCAACAAGTTTGAAGGGTGGCAATTCAAGTTCTACACTGATAGATGGAGGACAGATTAAAGTGGAACAAGGAAACTCTAACAAGCTTTTTGATCAACCAACTGATATTATCTCCTAAATAGACTTTTTCAATCTTTTAAACTTTACTGTAATGTATGATTCTTTAAATTATACATTTGAGTCTACTTGTTATGCACACTAATTTACAGATATGATATGATCCATGAACAATCTCCCTCACCTCACCTCCCCGAATCGAAATCGCGCTTCTTTCATTCATATTAGTTGGAGAAAAAGAACATGCCAATATGTCAATTGACAAGAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g091440.2.1SL2.50ch09:70723605..70727935499-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g091440.2SL2.50ch09:70723399..707293255,927-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g091440.2.1.1SL2.50ch09:70729228..7072932598-n/a
exonexon:Solyc09g091440.2.1.2SL2.50ch09:70727408..70727965558-n/a
exonexon:Solyc09g091440.2.1.3SL2.50ch09:70726183..70726623441-n/a
exonexon:Solyc09g091440.2.1.4SL2.50ch09:70725060..70725290231-n/a
exonexon:Solyc09g091440.2.1.5SL2.50ch09:70724529..7072459668-1
exonexon:Solyc09g091440.2.1.6SL2.50ch09:70724369..7072442658-n/a
exonexon:Solyc09g091440.2.1.7SL2.50ch09:70723810..7072387869-n/a
exonexon:Solyc09g091440.2.1.8SL2.50ch09:70723399..70723707309-n/a
intronintron:Solyc09g091440.2.1.2SL2.50ch09:70727966..70729227n/a-n/a
intronintron:Solyc09g091440.2.1.3SL2.50ch09:70726624..70727407n/a-n/a
intronintron:Solyc09g091440.2.1.4SL2.50ch09:70725291..70726182n/a-n/a
intronintron:Solyc09g091440.2.1.5SL2.50ch09:70724597..70725059n/a-n/a
intronintron:Solyc09g091440.2.1.6SL2.50ch09:70724427..70724528n/a-n/a
intronintron:Solyc09g091440.2.1.7SL2.50ch09:70723879..70724368n/a-n/a
intronintron:Solyc09g091440.2.1.8SL2.50ch09:70723708..70723809n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17940116%2Fdetails feature 17940116
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