Solanum lycopersicum mRNA Solyc09g090930.2.1

mRNA details  
Name
Solyc09g090930.2.1
Type
mRNA
Length
1,670
Organism
Solanum lycopersicum
Description
TPR domain protein (AHRD V1 *--- B6U810_MAIZE); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Location(s)
SL2.50ch09:70330002..70334314
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005488
  • GO:0005622
Length
4313
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g090930.2.1 TPR domain protein (AHRD V1 *--- B6U810_MAIZE); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical

AAGCTTAAAATAAATTTTACAATACATACTCCAAACTCCGAGTGGAAAAAAAGAACTTGGATAATACTCCTACTTGTAAAATCCCATAGTCTTCACATAAAATCATTTAGAAGAGCTTAATTTGATGGGAATTTAAAAGGGTTGTCTTGAAATACTTCAATTTTTTCTAATCTTGGAAAACTGTATTAAGCTCAAAGGTGACATTTTTATCTTGTCATAAGCAAGAAAGTTCAAAATGTTGCCTAAAGAACCATCATTTTGTATATATAATACTGAAGATGGGGTTGATGAGATGAAGGAAAATCAAGATTTGGTTAGGTCTGTGACAATAGGGGATATTGTATCAGATATAGGTAGTAGTGATTTCAGTTTTGGGAAAAAGGGGATGGGGTTGATTGAGGAAGATGAGAATGAAGATGAGGAAAAAAGGGTTTTTTATGAGGTTAATGAGCTAGGATTTGAAGAGAGTGAACAAGTAATTAGTTCAAAGTATCATGGTGGGGTTGAGTTTGAACCTTTAGATTTTGATGGAAATGGAGATGTTGAGGAATATTATAAAAGGGTTCTTAAAGAAGATCCCTGTAACCCTTTGTTTTTGAGGAATTATGCTCAACTTTTGCAGTCTAAGGGAGATCTTCCTGGAGCTGAACACTATTACTTTCAAGCTACACTAGCTGATCCAAAAGATGGAGATACCTTGTCACAGTATGCTAAGTTAGTATGGGAGCTGCACCAAGATAAAGATAGAGCATCAGATTACTTTGAACGTGCAGTACGTACTGCTCCTGAGAACAGCCATGTTCTTGGAGCATATGCTAGTTTCCTCTGGGACATTACTGACGATGAAAGTGAGGATGAAATGAACACACAGAGTGATAAGACTAAGATTGAGGAAAGTGGGGAAGCTACTGTATCCCGGAACTTAGATTACGAAGAAGCTGACAGACCTGTTAGCCCTCCCTTACATCTTGCAGCAGGATTAGGAATTGGGGTTAATCTAGTTGGTGGCAGCTCTCCTGTTGATTATACTGCAGCTGTATCTGATATGGACGGAAATGCCGAGGAGGAGTACATGAGAATGATCAAAGAATATCCTCATCACTCCGTGCTTTTAAGAAACTATGCTCAGTTTCTTAGTCAGTCTAAGGGAGACCTACTAGGTGCTGAAGAATATTACTCACACGCAATACTAGCTGATCCTACTGATGGAGAAACTATTTCACAGTATGCCATGTTGATATGGCAACTTCATCAGGATAAAGATAAAGCCTCAACCTACTTTAAGAGGGCAGTACAAGCTTCTCCACAAGACAGCGACGTGCTTGCTGCATATGCTAGGTTTCTCTGGCAAACAGAGGAAGATGAAGACGGAGAAGAAGATGAAACGTTAGGTGATCACAATGGAGCGCCACTTCTGCAAGGAGTCGCCTAAAGCCTGATGTCAAATGAATTTCACAATCCAGATTCTAATTCATATTTTAGTTTCTCAAGCTTTTCGCATTATCTAAAGACTTGGAGATTTCTCTTGTTGTGGAGGATCAACTATTCTGGGAAAATTTTTAGATGGTAAGTGTTGTTTAATGAGCAATAAAATGTGCACAATAATGTTAAATTGACTTTGTACAATGTTATTTTTGGGAATAATGATAGCAGTTGAAAGAGTTGAATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g090930.2.1SL2.50ch09:70330236..70334076399+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g090930.2SL2.50ch09:70330002..703343144,313+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g090930.2.1.1SL2.50ch09:70330002..70330623622+n/a
exonexon:Solyc09g090930.2.1.2SL2.50ch09:70331944..70332116173+n/a
exonexon:Solyc09g090930.2.1.3SL2.50ch09:70332500..7033259091+n/a
exonexon:Solyc09g090930.2.1.4SL2.50ch09:70332670..70332924255+1
exonexon:Solyc09g090930.2.1.5SL2.50ch09:70333412..70333584173+n/a
exonexon:Solyc09g090930.2.1.6SL2.50ch09:70333959..70334314356+n/a
intronintron:Solyc09g090930.2.1.1SL2.50ch09:70330624..70331943n/a+n/a
intronintron:Solyc09g090930.2.1.2SL2.50ch09:70332117..70332499n/a+n/a
intronintron:Solyc09g090930.2.1.3SL2.50ch09:70332591..70332669n/a+n/a
intronintron:Solyc09g090930.2.1.4SL2.50ch09:70332925..70333411n/a+n/a
intronintron:Solyc09g090930.2.1.5SL2.50ch09:70333585..70333958n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17939517%2Fdetails feature 17939517
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