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Solanum lycopersicum mRNA Solyc09g090740.2.1

mRNA details  
Name
Solyc09g090740.2.1
Type
mRNA
Length
2,422
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase (AHRD V1 *-** Q7Z4X3_HUMAN); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch09:70174224..70183459
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
9236
Nb exon
15
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g090740.2.1 ATP-dependent RNA helicase (AHRD V1 *-** Q7Z4X3_HUMAN); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

TGTGTTTGAGCTCTGTGTAGCAATGGCTTCTCAAATTTCAGATAAAAAGAGAACAAAGAAAACAAAGAAACGAAGCAGAGTTGAATCAGAAGAATTTGAGCGAATCAACTCACTTAATTGGAATCCAACACTTACAGAGAAAGATGATGCCTTCTCTTTCCTTATTGGCTCGAATGAGCTTGAAGGAGGTTTTTTATGTCTTGAAGAGATCGATGAATCAGAGTACAATTTGGGTATTGCCAAATCATCTGGTGGAAGTGAAGAAAAGGGGAAGACAAAACCGAAGAAACAGAAAGTAGATACAAAAAATGAGGAATTGAATGGTGAAGCTAAGGGTGAGAGCAAAGAGGAGATTGAAGAGGTGGAAAAGGAAACGAAACAAAAGAAGAAAAAGAAGATGAAGAAGAAGAAGAAAGATAAGATCAATAAAGATGCTGTAAATGAAGCTGAAGGAAATGAAGAGCCGCCAGCTGTCACTGATGGAAATGATGACCAAGAACAAGATTCAGTAGATGAAACTGAATATTATGCATGGAATGAACTGAGACTTCATCCACTGCTCATGAAATCGATATACGCGCTCAAGTTCAAAGAACCTACACCAATACAACAAGCGTGCATTCCTGCAGGTTCTCACCAAGGAAAGGATGTTGTGGGTGCTGCAGAGACAGGTTCTGGGAAAACACTGGCATTTGGTCTGCCCATTCTTCAACGTCTGCTTGAGGAGCGAGAAAAGGCCGAAAGGCAGCTTCCAGAAAATGGAGAATTGGATGATAAAGTTGCCTCCGCAGGTCTCCTCCGCGCTCTAATTATTACTCCTACAAGAGAGCTTGCCCTTCAGGTCACTGATCATCTGAAGGAAGCAGCAAAACATTCAAATTTTAGGGTTGTCCCTATTGTTGGTGGAATGTCAAGTGAAAAACAAGAAAGACTTTTGAAAACAAGGCCTGAAATTGTTGTCGGAACTCCGGGGAGGCTTTGGGAGCTTATGTCTGGTGGTGAAACTCATCTCGTGGAGTTGCACTCACTGTCATTTTTTGTGCTGGATGAGGCCGATCGGATGATAGAAAATGGCCATTTCCACGAGTTGCAGTCTATAGTTGACATGCTTCCTATGGCTAATAAATCGACTGATGACGATTCTCAGAAATCACAAAATTGTGAAACAGTTTCCAGTGTCCAAAGAAAGAAAAGGCAAACATTTGTGTTTTCTGCAACCATTGCTTTGTCTGCCGATTTCAGGAAGAAGCTAAAGCGTGGATCACAAAAATCAAAAGCAAACGATGAGTTGAATTCAATAGAAACTCTGTCTGAGAGAGCAGGAATGAGGGCAGATGCGGCAATCATTGATCTGACTAATGCATCAATTCTAGCCAACAAGCTCGAGGAGTCGTTTATAGACTGCAGGGATGAAGATAAAGATGGGTATTTGTATTACATTTTGAGTGTTCATGGACAAGGTCGGACAATTGTCTTCTGTACGTCCATTGCAGCTTTACGCCATATCTCCTCCCTCTTGCGCATCCTTGGCGTCAATGTCTGGACACTTCATGCCCAGATGCAACAGAGAGCTCGACTTAAGGCAATTGACCGGTTTCGGGGACATGAGCATGGTATACTCATTGCTACAGATGTTGCAGCCAGAGGTTTGGATATTCCTGGTGTTCGAACCGTCATTCACTATCAGCTACCTCATTCAGCTGAAGTTTACGTTCATAGAAGTGGAAGAACTGCTAGGGCTCATTCTGATGGATGTAGCATTGCTCTAATCACACCAAATGATACCTCAAAGTTTGCTGCTTTATGCAGGTCGTTTTCAAAGGATAACTTCCAGCGGTTTCCCTTAGAAATGTCATACATGCCTGAAGTTATGAAGCGATTATCCCTTGCACGTCAAATAGACAAGATTTCCCGAAAGGACTCTCAGGACAAGGCCAAGAAAAATTGGCTTGAGCGAAGTGCTGAATTAATGGAACTAGATTTGGAAGATAATGATAGTGAGGAGGAAAGAGTGAACAATCATAAGCGAAAGAAAGCCACATCTGCTCAACTAACTAATCTACAAGAGGAACTAAAAAGTCTTCTTTCACGGCCATTGCAACCCAAAACATTCTCAAAACGCTACTTGGCTGGGGCTGGTGTTTCACCTCTCCTTCAGAACCAGCTGGAGGAATTAGCTAGACAGAAAAATTCAAATAATTCCGGAGATGTTAAAAGGAAGAAAATGATCGTCATTGGTCAGGATTGTGTCGAGCCCCTCCAGGCACTTAGGAGTGCTGGTCCAGAGACTAAGTTGAATCTGAAGGATATGGCTGAAAAACGGAGAGATATAACCGAGTTAAGGAGAAAGAGGAGAGAAACCAAAAAACGTTTGCGCGAACAACGACGAAAACAGAAGAAAAAACTTCAAGGAAAAGAGTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g090740.2.1SL2.50ch09:70174223..70183437800-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g090740.2SL2.50ch09:70174224..701834599,236-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g090740.2.1.1SL2.50ch09:70183272..70183459188-n/a
exonexon:Solyc09g090740.2.1.10SL2.50ch09:70176431..70176535105-n/a
exonexon:Solyc09g090740.2.1.11SL2.50ch09:70175150..70175290141-n/a
exonexon:Solyc09g090740.2.1.12SL2.50ch09:70174928..7017499366-n/a
exonexon:Solyc09g090740.2.1.13SL2.50ch09:70174569..70174721153-n/a
exonexon:Solyc09g090740.2.1.14SL2.50ch09:70174381..7017446282-n/a
exonexon:Solyc09g090740.2.1.15SL2.50ch09:70174224..7017427653-2
exonexon:Solyc09g090740.2.1.2SL2.50ch09:70181317..70181601285-2
exonexon:Solyc09g090740.2.1.3SL2.50ch09:70180314..70180486173-2
exonexon:Solyc09g090740.2.1.4SL2.50ch09:70180034..70180228195-n/a
exonexon:Solyc09g090740.2.1.5SL2.50ch09:70179128..70179304177-n/a
exonexon:Solyc09g090740.2.1.6SL2.50ch09:70178195..70178577383-n/a
exonexon:Solyc09g090740.2.1.7SL2.50ch09:70177702..70177882181-1
exonexon:Solyc09g090740.2.1.8SL2.50ch09:70177171..70177293123-n/a
exonexon:Solyc09g090740.2.1.9SL2.50ch09:70176977..70177093117-n/a
intronintron:Solyc09g090740.2.1.10SL2.50ch09:70176536..70176976n/a-n/a
intronintron:Solyc09g090740.2.1.11SL2.50ch09:70175291..70176430n/a-n/a
intronintron:Solyc09g090740.2.1.12SL2.50ch09:70174994..70175149n/a-n/a
intronintron:Solyc09g090740.2.1.13SL2.50ch09:70174722..70174927n/a-n/a
intronintron:Solyc09g090740.2.1.14SL2.50ch09:70174463..70174568n/a-n/a
intronintron:Solyc09g090740.2.1.15SL2.50ch09:70174277..70174380n/a-n/a
intronintron:Solyc09g090740.2.1.2SL2.50ch09:70181602..70183271n/a-n/a
intronintron:Solyc09g090740.2.1.3SL2.50ch09:70180487..70181316n/a-n/a
intronintron:Solyc09g090740.2.1.4SL2.50ch09:70180229..70180313n/a-n/a
intronintron:Solyc09g090740.2.1.5SL2.50ch09:70179305..70180033n/a-n/a
intronintron:Solyc09g090740.2.1.6SL2.50ch09:70178578..70179127n/a-n/a
intronintron:Solyc09g090740.2.1.7SL2.50ch09:70177883..70178194n/a-n/a
intronintron:Solyc09g090740.2.1.8SL2.50ch09:70177294..70177701n/a-n/a
intronintron:Solyc09g090740.2.1.9SL2.50ch09:70177094..70177170n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17939284%2Fdetails feature 17939284
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