Solanum lycopersicum mRNA Solyc09g075390.2.1
 mRNA details
|
| Name | Type |
Length
3,324
|
Organism |
|
Description
GTP pyrophosphokinase (AHRD V1 **** Q3A9Z8_CARHZ); contains Interpro domain(s) IPR007685 RelA/SpoT
|
|
Location(s)
SL2.50ch09:67096583..67110106
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0015969
- GO:0003824
- Length
- 13524
- Nb exon
- 24
- Sifter term
- GO:0008893
- GO:0008728
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc09g075390.2.1 GTP pyrophosphokinase (AHRD V1 **** Q3A9Z8_CARHZ); contains Interpro domain(s) IPR007685 RelA/SpoT
GTGTGGTCATAAGCTGAAATCTCCGCGACTGAAATATCTCACCCCCCCCTCTCTCTCTCTCTAGATTATCTCCTTGCCATTTTGTTGGCTCTCTTTCTCTCTCTCATATTCGCTCGCTTGCTCCACACCATTGGCTTATCCTTCCTGCTCACTAATTTCTCTGAATTCTACAATTTTCGCCTGACCGCAATCACAGCAGCAGTAGCTTTGAATGCTAATCATCTTTTGATCCTCTTCACTCGCTGTGATTTTACCATCTCTCTCCGGCCGAATATGTTTATGTATCTGTTGCATCTTTGTATTTCCAGACGAACGAGGTTTTGTTCCGGTTCGCTTGATTTTTCTTAAGCGCTTGCTTCCAATTCTTCTTCTCTTCTGTGTACCGATGCTTTTAAATAGACATGGCTACTGCTACTTCAATGTCAGTTTCTATCGAATGTGTGAATATATGTAAGTCTTGGAAAGGAGATGTGAGTGGAAGACTCGACTGTAGTGCGTTATCTTGTGCCTGGAAGGCACCAAGAGCCTTGACTGGGTTCCTTGCAAGCACAACTCATCCTACTCAGTGTTCCTCTACTCCTTTTGGGCGATATGGAAGACGAGATCGTCTCCGCCGATGTAGATGTTATGATGTGGATGAACGCTATCCTGTTGAAGTTCTGCGAGGGGTCCCTGGCTCAATGCTTCTACTATCTGCTTCTAGCAAATGGAAATTGTGTTGCTCTTCATCATTTTCTTCAGAGTTGTATGAAGAGATATCTCCTGAAAGTTTGTGGGAGGATCTTAAACCTACTATTTCATATCTTTCTTGCAAGGAATTGGAATTGGTTCGTAAGGCTTTGAATCTTGCTTTTGAGGCACATGATGGTCAAAAGCGTCGTAGTGGCGAGCCCTTTATTGTTCACCCAGTTGCAGTTGCACAGATCCTTGGACAGCTTGAATTGGATTGGGAGTCGGTTGCTGCTGGGTTATTACATGATACTGTAGAAGACACAGATGTAGTTACCTTTGAAAGAATAGAGAAGGAATTTGGCGCAACAGTTCGCCGCATTGTTGAAGGGGAGACTAAGGTATCCAAGTTGGGAAAAATCAAGTGCAAGGATGAAAGCCATGTACAGGATGTCAAAGCTGATGATCTTAGGCAGATGTTTCTTTCCATGACAGAGGAGGTCCGTGTTATAATTGTCAAATTAGCTGATAGATTACATAACATGCGCACTCTTTCACACATGCCTCCACACAAGCAGTCTGGAATCGCAACAGAGACGCTGCAGGTTTTTGCTCCTTTGGCAAAGCTTCTCGGAATATACCAAATCAAGTCAGAGCTTGAAAACTTAGCATTTATGTATACAAATGCTGAAGACTATGCCAGGGTGCAGCGTAGGATTGCAGAACTTTATAAAGAACATGAAAAGGAACTTGAAGAGGCAAAAAGAATATTGATGAAGAAAATAGAGGAAGACCAATTCTTAGAACTTGTGACTGTGAAGACGGAAATTCAATCAATATGCAAGGAACCTTACAGCATCTACAAAGCAGTACTCAAGTCTAAGAGTTCAATAAATGAAGTAAACCAAATTGCACAGCTTCGAATTATTATAAAACCAAAGCCTTGTGTCGGAGTTAGGCCCCTTTGCAGTGCACAGCAGATATGCTATCATCTGCTTGGACTAGTACATGGAATCTGGACACCTATCCCTCGTGCTATGAAAGACTACATTGCCACCCCTAAGCCTAATGGCTATCAAAGTCTTCATACAACTGTGATTCCATTTCTTTATGAGAGCATGTTTCGTTTGGAGGTTCAGATAAGAACTGAAGAGATGGACCTCATAGCTGAAAGAGGCATTGCTGCACATTATAGTGGGAAAGGTTTTGTAAATGGTTTAGTTGGGCATGTTATAACCAATGATAAAAGTTCTGGAGGGAAAATAGTCTGCCTTAACAATGCCAATATTGCTCTCAGGATTGGCTGGCTGAATGCAATTAGGGAGTGGCAAGAAGAGTTCGTTGGAAACATGAGCTCTAGGGAATTTGTGGACACTGTTACCAGAGATCTGTTGGGCAGCCGTGTATTTGTGTTTACACCCGGAGGAGAGATAAAACATCTCCCAAAGGGGGCTACTGTCATTGATTATGCGTATATGATACACACTGAAATTGGCAATAAAATGGTGGCTGCTAAGGTGAATGGTAATCTTGTCAAGCCAATGCATGTACTTGCAAACGCAGAAGTTGTAGAGATTATCACTTACAATGGTCTCTCCAGCAAGTCTGCTTTCGAGAGACATAAACAGTGGCTTCAACATGCAAAAACTCGTTGCGCCCGGCACAAGATTATGAAATTTTTGAGAGAGCAAGCTGCACTATCAGCATCTGAAATAACTGTGGATTCAGTTAAGGAATTTGCTGCTGAGTCTGAAGGGGATAGCACAGTGGAAGAATTAGCAGATTACTCAAAGGGAACCAAACATTCGTGGGAGAAAATCCTCAAGAATGTTATGGAGGTATCATCTGCAAGGACAAATGGTGAAGATATTTTCCAACTCCGAAGTGGTAGTATTCAAATTCCCAAGGTAAATGGGAAACATAACAAGTGCATGCAGCATACGAGTTTGAAGGCCACTGGGGAGACATTGTCACAAGGAAATGGTGTTGGTGAAATGATACTTGCTAACATACCAAGGTACAGGGATGTTCTGCCCGGATTGGACGGCTGGCTGGCTAGCAAAGTTGCAACTTGGCAGAACCTGGAAGGGCACTCTGTGCAGTGGTTTTGTGTTGTCAGCATAGATCGAAAAGGCATGATGGCGGATATTACTTCAGCATTGGCAGCTGTAGGCGTCACCATATGTTCTTGTGCGGCTGAGACGGATAGAGAAAAGGGGATTGGTGTCGCGCTATTTCATATTGAAGCCGACCTAGAGAGCTTGGTTGGTGCAAGTTTGAAGATTGACATGATCCTAGGTGTTTTGGGATGGTCCACGGGCTGCAGTTGGTCAGAGAACAAACAGTTTCTAGAATGCTAATCTGGTGGCCTGGTGAAGATCGAGTACTTGCCCAGCTGTTGAAAGCTTGGGGAAGAAAGTTTTGTTCAGTGAAGCCTGACTTCTTCTTTTCTTCTCGTTGTCAATTTTTTTTCTCCTCCCACCTTCTTGACAAGTATAGAAGCAAACAACATTAGGTTATATGGTGTCGGGCGACTGTATATATAAAGGAAGAGTAGCAACCAGTTATACTTGTAGAGGAATTTTCAATTATACCAACTCCAACAAAATTATGTTAAGACATTTATACAAATTAAATATATTAAATATCTTCCAT
GTGTGGTCATAAGCTGAAATCTCCGCGACTGAAATATCTCACCCCCCCCTCTCTCTCTCTCTAGATTATCTCCTTGCCATTTTGTTGGCTCTCTTTCTCTCTCTCATATTCGCTCGCTTGCTCCACACCATTGGCTTATCCTTCCTGCTCACTAATTTCTCTGAATTCTACAATTTTCGCCTGACCGCAATCACAGCAGCAGTAGCTTTGAATGCTAATCATCTTTTGATCCTCTTCACTCGCTGTGATTTTACCATCTCTCTCCGGCCGAATATGTTTATGTATCTGTTGCATCTTTGTATTTCCAGACGAACGAGGTTTTGTTCCGGTTCGCTTGATTTTTCTTAAGCGCTTGCTTCCAATTCTTCTTCTCTTCTGTGTACCGATGCTTTTAAATAGACATGGCTACTGCTACTTCAATGTCAGTTTCTATCGAATGTGTGAATATATGTAAGTCTTGGAAAGGAGATGTGAGTGGAAGACTCGACTGTAGTGCGTTATCTTGTGCCTGGAAGGCACCAAGAGCCTTGACTGGGTTCCTTGCAAGCACAACTCATCCTACTCAGTGTTCCTCTACTCCTTTTGGGCGATATGGAAGACGAGATCGTCTCCGCCGATGTAGATGTTATGATGTGGATGAACGCTATCCTGTTGAAGTTCTGCGAGGGGTCCCTGGCTCAATGCTTCTACTATCTGCTTCTAGCAAATGGAAATTGTGTTGCTCTTCATCATTTTCTTCAGAGTTGTATGAAGAGATATCTCCTGAAAGTTTGTGGGAGGATCTTAAACCTACTATTTCATATCTTTCTTGCAAGGAATTGGAATTGGTTCGTAAGGCTTTGAATCTTGCTTTTGAGGCACATGATGGTCAAAAGCGTCGTAGTGGCGAGCCCTTTATTGTTCACCCAGTTGCAGTTGCACAGATCCTTGGACAGCTTGAATTGGATTGGGAGTCGGTTGCTGCTGGGTTATTACATGATACTGTAGAAGACACAGATGTAGTTACCTTTGAAAGAATAGAGAAGGAATTTGGCGCAACAGTTCGCCGCATTGTTGAAGGGGAGACTAAGGTATCCAAGTTGGGAAAAATCAAGTGCAAGGATGAAAGCCATGTACAGGATGTCAAAGCTGATGATCTTAGGCAGATGTTTCTTTCCATGACAGAGGAGGTCCGTGTTATAATTGTCAAATTAGCTGATAGATTACATAACATGCGCACTCTTTCACACATGCCTCCACACAAGCAGTCTGGAATCGCAACAGAGACGCTGCAGGTTTTTGCTCCTTTGGCAAAGCTTCTCGGAATATACCAAATCAAGTCAGAGCTTGAAAACTTAGCATTTATGTATACAAATGCTGAAGACTATGCCAGGGTGCAGCGTAGGATTGCAGAACTTTATAAAGAACATGAAAAGGAACTTGAAGAGGCAAAAAGAATATTGATGAAGAAAATAGAGGAAGACCAATTCTTAGAACTTGTGACTGTGAAGACGGAAATTCAATCAATATGCAAGGAACCTTACAGCATCTACAAAGCAGTACTCAAGTCTAAGAGTTCAATAAATGAAGTAAACCAAATTGCACAGCTTCGAATTATTATAAAACCAAAGCCTTGTGTCGGAGTTAGGCCCCTTTGCAGTGCACAGCAGATATGCTATCATCTGCTTGGACTAGTACATGGAATCTGGACACCTATCCCTCGTGCTATGAAAGACTACATTGCCACCCCTAAGCCTAATGGCTATCAAAGTCTTCATACAACTGTGATTCCATTTCTTTATGAGAGCATGTTTCGTTTGGAGGTTCAGATAAGAACTGAAGAGATGGACCTCATAGCTGAAAGAGGCATTGCTGCACATTATAGTGGGAAAGGTTTTGTAAATGGTTTAGTTGGGCATGTTATAACCAATGATAAAAGTTCTGGAGGGAAAATAGTCTGCCTTAACAATGCCAATATTGCTCTCAGGATTGGCTGGCTGAATGCAATTAGGGAGTGGCAAGAAGAGTTCGTTGGAAACATGAGCTCTAGGGAATTTGTGGACACTGTTACCAGAGATCTGTTGGGCAGCCGTGTATTTGTGTTTACACCCGGAGGAGAGATAAAACATCTCCCAAAGGGGGCTACTGTCATTGATTATGCGTATATGATACACACTGAAATTGGCAATAAAATGGTGGCTGCTAAGGTGAATGGTAATCTTGTCAAGCCAATGCATGTACTTGCAAACGCAGAAGTTGTAGAGATTATCACTTACAATGGTCTCTCCAGCAAGTCTGCTTTCGAGAGACATAAACAGTGGCTTCAACATGCAAAAACTCGTTGCGCCCGGCACAAGATTATGAAATTTTTGAGAGAGCAAGCTGCACTATCAGCATCTGAAATAACTGTGGATTCAGTTAAGGAATTTGCTGCTGAGTCTGAAGGGGATAGCACAGTGGAAGAATTAGCAGATTACTCAAAGGGAACCAAACATTCGTGGGAGAAAATCCTCAAGAATGTTATGGAGGTATCATCTGCAAGGACAAATGGTGAAGATATTTTCCAACTCCGAAGTGGTAGTATTCAAATTCCCAAGGTAAATGGGAAACATAACAAGTGCATGCAGCATACGAGTTTGAAGGCCACTGGGGAGACATTGTCACAAGGAAATGGTGTTGGTGAAATGATACTTGCTAACATACCAAGGTACAGGGATGTTCTGCCCGGATTGGACGGCTGGCTGGCTAGCAAAGTTGCAACTTGGCAGAACCTGGAAGGGCACTCTGTGCAGTGGTTTTGTGTTGTCAGCATAGATCGAAAAGGCATGATGGCGGATATTACTTCAGCATTGGCAGCTGTAGGCGTCACCATATGTTCTTGTGCGGCTGAGACGGATAGAGAAAAGGGGATTGGTGTCGCGCTATTTCATATTGAAGCCGACCTAGAGAGCTTGGTTGGTGCAAGTTTGAAGATTGACATGATCCTAGGTGTTTTGGGATGGTCCACGGGCTGCAGTTGGTCAGAGAACAAACAGTTTCTAGAATGCTAATCTGGTGGCCTGGTGAAGATCGAGTACTTGCCCAGCTGTTGAAAGCTTGGGGAAGAAAGTTTTGTTCAGTGAAGCCTGACTTCTTCTTTTCTTCTCGTTGTCAATTTTTTTTCTCCTCCCACCTTCTTGACAAGTATAGAAGCAAACAACATTAGGTTATATGGTGTCGGGCGACTGTATATATAAAGGAAGAGTAGCAACCAGTTATACTTGTAGAGGAATTTTCAATTATACCAACTCCAACAAAATTATGTTAAGACATTTATACAAATTAAATATATTAAATATCTTCCAT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc09g075390.2.1 | SL2.50ch09:67096877..67109705 | 876 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc09g075390.2 | SL2.50ch09:67096583..67110106 | 13,524 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc09g075390.2.1.1 | SL2.50ch09:67109681..67110106 | 426 | - | 2 |
| exon | exon:Solyc09g075390.2.1.10 | SL2.50ch09:67105026..67105133 | 108 | - | n/a |
| exon | exon:Solyc09g075390.2.1.11 | SL2.50ch09:67104736..67104833 | 98 | - | 1 |
| exon | exon:Solyc09g075390.2.1.12 | SL2.50ch09:67102338..67102398 | 61 | - | n/a |
| exon | exon:Solyc09g075390.2.1.13 | SL2.50ch09:67102179..67102241 | 63 | - | n/a |
| exon | exon:Solyc09g075390.2.1.14 | SL2.50ch09:67101639..67101695 | 57 | - | n/a |
| exon | exon:Solyc09g075390.2.1.15 | SL2.50ch09:67101450..67101551 | 102 | - | n/a |
| exon | exon:Solyc09g075390.2.1.16 | SL2.50ch09:67100941..67101099 | 159 | - | n/a |
| exon | exon:Solyc09g075390.2.1.17 | SL2.50ch09:67100707..67100838 | 132 | - | n/a |
| exon | exon:Solyc09g075390.2.1.18 | SL2.50ch09:67100537..67100623 | 87 | - | n/a |
| exon | exon:Solyc09g075390.2.1.19 | SL2.50ch09:67100316..67100387 | 72 | - | n/a |
| exon | exon:Solyc09g075390.2.1.2 | SL2.50ch09:67108807..67109000 | 194 | - | n/a |
| exon | exon:Solyc09g075390.2.1.20 | SL2.50ch09:67099040..67099126 | 87 | - | n/a |
| exon | exon:Solyc09g075390.2.1.21 | SL2.50ch09:67098495..67098951 | 457 | - | 2 |
| exon | exon:Solyc09g075390.2.1.22 | SL2.50ch09:67097828..67097889 | 62 | - | n/a |
| exon | exon:Solyc09g075390.2.1.23 | SL2.50ch09:67097049..67097117 | 69 | - | n/a |
| exon | exon:Solyc09g075390.2.1.24 | SL2.50ch09:67096583..67096973 | 391 | - | n/a |
| exon | exon:Solyc09g075390.2.1.3 | SL2.50ch09:67107010..67107168 | 159 | - | n/a |
| exon | exon:Solyc09g075390.2.1.4 | SL2.50ch09:67106474..67106539 | 66 | - | n/a |
| exon | exon:Solyc09g075390.2.1.5 | SL2.50ch09:67106202..67106294 | 93 | - | n/a |
| exon | exon:Solyc09g075390.2.1.6 | SL2.50ch09:67105991..67106122 | 132 | - | n/a |
| exon | exon:Solyc09g075390.2.1.7 | SL2.50ch09:67105760..67105858 | 99 | - | n/a |
| exon | exon:Solyc09g075390.2.1.8 | SL2.50ch09:67105608..67105685 | 78 | - | n/a |
| exon | exon:Solyc09g075390.2.1.9 | SL2.50ch09:67105455..67105526 | 72 | - | n/a |
| intron | intron:Solyc09g075390.2.1.10 | SL2.50ch09:67105134..67105454 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.11 | SL2.50ch09:67104834..67105025 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.12 | SL2.50ch09:67102399..67104735 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.13 | SL2.50ch09:67102242..67102337 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.14 | SL2.50ch09:67101696..67102178 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.15 | SL2.50ch09:67101552..67101638 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.16 | SL2.50ch09:67101100..67101449 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.17 | SL2.50ch09:67100839..67100940 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.18 | SL2.50ch09:67100624..67100706 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.19 | SL2.50ch09:67100388..67100536 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.2 | SL2.50ch09:67109001..67109680 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.20 | SL2.50ch09:67099127..67100315 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.21 | SL2.50ch09:67098952..67099039 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.22 | SL2.50ch09:67097890..67098494 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.23 | SL2.50ch09:67097118..67097827 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.24 | SL2.50ch09:67096974..67097048 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.3 | SL2.50ch09:67107169..67108806 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.4 | SL2.50ch09:67106540..67107009 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.5 | SL2.50ch09:67106295..67106473 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.6 | SL2.50ch09:67106123..67106201 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.7 | SL2.50ch09:67105859..67105990 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.8 | SL2.50ch09:67105686..67105759 | n/a | - | n/a |
| intron | intron:Solyc09g075390.2.1.9 | SL2.50ch09:67105527..67105607 | n/a | - | n/a |
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