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Solanum lycopersicum mRNA Solyc09g075360.2.1

mRNA details  
Name
Solyc09g075360.2.1
Type
mRNA
Length
1,954
Organism
Solanum lycopersicum
Description
Endoglucanase 1 (AHRD V1 ***- B6U0P7_MAIZE); contains Interpro domain(s) IPR008928 Six-hairpin glycosidase-like IPR012341 Six-hairpin glycosidase IPR018221 Glycoside hydrolase, family 9, active site IPR001701 Glycoside hydrolase, family 9
Location(s)
SL2.50ch09:67086865..67090300
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005975
  • GO:0003824
Length
3436
Nb exon
8
Sifter term
GO:0008810
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g075360.2.1 Endoglucanase 1 (AHRD V1 ***- B6U0P7_MAIZE); contains Interpro domain(s) IPR008928 Six-hairpin glycosidase-like IPR012341 Six-hairpin glycosidase IPR018221 Glycoside hydrolase, family 9, active site IPR001701 Glycoside hydrolase, family 9

GCCACTCTCCTGGGGTTAGTTTGTTGGTGTTTTGGGGCTGGGGTTTGGTTACTAGTATTACTTTTCAGGTGGGTAGTTTCCAAAATGGCTTCTTGTTCTTCTTCAACAGCAGCTATGGCTATGGCTATAACCATTTTTCTGTTTTTGTTGAGCTTTGTTACACCTGTGTTTCTTGCTAAACCTGTACATCATGCTCACCATCCTCGTTTTGCTTCTCATAACTATAGAGATGCTCTTGCAAAATCCATTATTTATTTTGAGGGTCAGAGGTCAGGGAAGCTCCCTTCTAGCCAGAGGATTACTTGGCGTAAAGATTCTGGTCTATCAGATGGCAAAGCTATGGGGGTTGATTTGGTTGGTGGATATTATGACGCTGGAGACAACGTGAAGTTCGGTTTCCCAATGGCATTCACCACCACAATGCTATCATGGAGTGTGATTGAGTTTGGTGGGTTGATGAAAGGAGAGCTACTGAATGCAAAACAAGCCATTGGTTGGGCTACTGAATATCTTCTCAAGGCCACAGCCCATCCAGACACCATTTACGTTCAGGTTGGAGATGCAGGAAGTGACCACTCTTGTTGGGAGAGACCTGAGGATATGGACACCCCAAGAAGTGTGTACAAAATTGACAAAAACACTCCTGGGACTGAAGTTGCTGCTGAAACTGCTGCTGCTCTCGCTGCTGCTTCCTTAGTCTTTAGGAAATGCAACCCATCTTACTCCAAGATACTAATCAAAAGGGCCATCAGGGTGTTTGCCTTTGCTGATAAGTATAGAGGTTCATACAGCAATGGTCTGAGAAAAGTAGTGTGCCCATACTACTGCTCAGTTTCGGGATATGAGGATGAGCTGTTGTGGGGTGCTGCTTGGTTACATAGAGCCACAAAGAACCCAACTTATCTCAATTATATCCAAAGGAACGGGCAAACTCTTGGGGCCGCGGAGACTGATAACACATTCGGGTGGGACAATAAGCATGTTGGAGCAAGGATTCTTCTTTCCAAGTCATTTCTTGTTCAAAAGCTTCAAACTCTCCATGATTACAAGAGCCACGCAGACAACTACATTTGCTCCCTAATTCCAGGCACACCGGCTTCTCAAGCGCAATATACACCAGGAGGGCTACTCTTCAAGATGGATGATAGCAACATGCAGTATGTTACCTCCACTTCTTTCCTGCTAGTCACCTATGCCAAGTACTTAACTTCTGCTCGCATGGTTGTTAAATGTGGTGGAGTTGTTATTACACCAAAGAGGCTTCGAAATGTAGCCAAAAAACAGGTGGACTATTTGTTAGGAGACAATCCACTAAAAATGTCATACATGGTGGGATATGGAGCAAGGTATCCACAGAGGATTCATCACAGGGGATCCTCATTACCCTCAGTCGCGAACCATCCAGCAAAGATACAATGCAGGGATGGTTTCAGTGTGATGAACTCACAATCACCAAACCCGAACGTACTAGTAGGGGCTGTGGTAGGTGGTCCTGATGAGCATGATCGTTTCCCAGACGAGCGTTCAGATTACGAGCAATCTGAACCTGCCACTTACATTAATGCTCCACTTGTTGGAACACTCACTTACCTTGCTCACTCATTTGGCCAACTCTAAAGTCAAGTGTGTAGTAGAATCAAGAATGAAGCCATGTTGGTCTTTGTTTTTACTTTTTCTAATTGCCTTGTTGATCACTAGTAGTAATATAATATATAGTCTAATCTAAATGGGGATGTGCTGGTGTTGTGGTTGTATTGGCTGAGACCCTAAAAAAGAGGCTCCAGCCCCCAACCAACCCCCCCCTCCTATGCACACAGGCCAAATGCTGTTTCATTGTTAGCAGCATATTTGCCTTGTTGGAGCATATGTTGTTACTAGTATTATTAATATTTCTATAGTGGAAGCTTTCTTGTTTTAACTTTCATGTTATCCGCTTTTAACATGTTGGTTAACT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g075360.2.1SL2.50ch09:67086948..67089963511+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g075360.2SL2.50ch09:67086865..670903003,436+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g075360.2.1.1SL2.50ch09:67086865..67087209345+n/a
exonexon:Solyc09g075360.2.1.2SL2.50ch09:67088002..67088208207+n/a
exonexon:Solyc09g075360.2.1.3SL2.50ch09:67088301..67088501201+n/a
exonexon:Solyc09g075360.2.1.4SL2.50ch09:67088770..6708886293+n/a
exonexon:Solyc09g075360.2.1.5SL2.50ch09:67088940..67089101162+n/a
exonexon:Solyc09g075360.2.1.6SL2.50ch09:67089186..67089297112+n/a
exonexon:Solyc09g075360.2.1.7SL2.50ch09:67089388..67089551164+n/a
exonexon:Solyc09g075360.2.1.8SL2.50ch09:67089631..67090300670+2
intronintron:Solyc09g075360.2.1.1SL2.50ch09:67087210..67088001n/a+n/a
intronintron:Solyc09g075360.2.1.2SL2.50ch09:67088209..67088300n/a+n/a
intronintron:Solyc09g075360.2.1.3SL2.50ch09:67088502..67088769n/a+n/a
intronintron:Solyc09g075360.2.1.4SL2.50ch09:67088863..67088939n/a+n/a
intronintron:Solyc09g075360.2.1.5SL2.50ch09:67089102..67089185n/a+n/a
intronintron:Solyc09g075360.2.1.6SL2.50ch09:67089298..67089387n/a+n/a
intronintron:Solyc09g075360.2.1.7SL2.50ch09:67089552..67089630n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17935701%2Fdetails feature 17935701
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