Solanum lycopersicum mRNA Solyc09g010370.2.1
 mRNA details
|
| Name | Type |
Length
1,050
|
Organism |
|
Description
Ras-related protein Rab-8A (AHRD V1 ***- C1C123_9MAXI); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type
|
|
Location(s)
SL2.50ch09:3753893..3759018
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| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0007264
- GO:0015031
- GO:0005525
- GO:0007165
- GO:0005622
- Length
- 5126
- Sifter term
- GO:0003924
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc09g010370.2.1 Ras-related protein Rab-8A (AHRD V1 ***- C1C123_9MAXI); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type
TACAGTCTCTCTATTTATTAGATCTCAAACATATTTTCATATCTTTCTCTCTCTTTCATTTTTCATTTTTCTCCGATCTCGGGTTGGAGTTTCCCTTCATCATTTTCTGAGAAATAATTTCTAATGGCCGCTCCACCCGCTAGAGCTCGAGCTGATTACGATTACCTCATCAAACTCCTTTTGATCGGCGACAGCGGTGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGTATTGACTTCAAGATAAGGACCATAGAGCTTGACAGTAAGCGCATCAAACTGCAAATCTGGGATACTGCTGGTCAGGAGCGATTCCGAACAATTACAACTGCTTACTACCGTGGAGCCATGGGTATATTGCTGGTGTATGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTGGATAAGAAACATTGAACAGCATGCCTCCGACAATGTCAACAAAATACTGGTCGGCAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGCCAAGCACTTGCTGATGAATATGGCATTAAATTCTTTGAAACTAGTGCCAAGACAAATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGATATAAAACAAAGGCTTGCCGAATCTGACTCAAAGGCTGAGCCTCAGACCATCAGGATAAATCAACCGGACCAGGGAGCAGGATCTTCACAAGGCGCTCAAAAATCAGCTTGCTGTGGTTCTTAAAATATCGATTAACAGCAAATGAAGCCAGGATGATGGGAAATACATCCTTAAAATGACCATTTTAGTGGAAGGGCTGAAACTAATATCTTTTTTTTATTATTATAACATTCTTATTGTATTTCTCTCTTTACAGCTCTTCTCTTCCAATATCTATTTGTATTTGGTGGCAGCTCTTAGTATTTGCAAAAAAAATTATCAGTATATTTGCTCACCACTTTTTTGACTTATATAAATGAAGGGACAAACCTGCCTTCTAATGTTCTTGTACAAACTTTT
TACAGTCTCTCTATTTATTAGATCTCAAACATATTTTCATATCTTTCTCTCTCTTTCATTTTTCATTTTTCTCCGATCTCGGGTTGGAGTTTCCCTTCATCATTTTCTGAGAAATAATTTCTAATGGCCGCTCCACCCGCTAGAGCTCGAGCTGATTACGATTACCTCATCAAACTCCTTTTGATCGGCGACAGCGGTGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGTATTGACTTCAAGATAAGGACCATAGAGCTTGACAGTAAGCGCATCAAACTGCAAATCTGGGATACTGCTGGTCAGGAGCGATTCCGAACAATTACAACTGCTTACTACCGTGGAGCCATGGGTATATTGCTGGTGTATGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTGGATAAGAAACATTGAACAGCATGCCTCCGACAATGTCAACAAAATACTGGTCGGCAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGCCAAGCACTTGCTGATGAATATGGCATTAAATTCTTTGAAACTAGTGCCAAGACAAATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGATATAAAACAAAGGCTTGCCGAATCTGACTCAAAGGCTGAGCCTCAGACCATCAGGATAAATCAACCGGACCAGGGAGCAGGATCTTCACAAGGCGCTCAAAAATCAGCTTGCTGTGGTTCTTAAAATATCGATTAACAGCAAATGAAGCCAGGATGATGGGAAATACATCCTTAAAATGACCATTTTAGTGGAAGGGCTGAAACTAATATCTTTTTTTTATTATTATAACATTCTTATTGTATTTCTCTCTTTACAGCTCTTCTCTTCCAATATCTATTTGTATTTGGTGGCAGCTCTTAGTATTTGCAAAAAAAATTATCAGTATATTTGCTCACCACTTTTTTGACTTATATAAATGAAGGGACAAACCTGCCTTCTAATGTTCTTGTACAAACTTTT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc09g010370.2.1 | SL2.50ch09:3754168..3758772 | 217 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc09g010370.2 | SL2.50ch09:3753893..3759018 | 5,126 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc09g010370.2.1.1 | SL2.50ch09:3758938..3759018 | 81 | - | n/a |
| exon | exon:Solyc09g010370.2.1.2 | SL2.50ch09:3758700..3758814 | 115 | - | 2 |
| exon | exon:Solyc09g010370.2.1.3 | SL2.50ch09:3756388..3756460 | 73 | - | 1 |
| exon | exon:Solyc09g010370.2.1.4 | SL2.50ch09:3755688..3755788 | 101 | - | 2 |
| exon | exon:Solyc09g010370.2.1.5 | SL2.50ch09:3755465..3755530 | 66 | - | 2 |
| exon | exon:Solyc09g010370.2.1.6 | SL2.50ch09:3755024..3755121 | 98 | - | n/a |
| exon | exon:Solyc09g010370.2.1.7 | SL2.50ch09:3754864..3754926 | 63 | - | n/a |
| exon | exon:Solyc09g010370.2.1.8 | SL2.50ch09:3754695..3754787 | 93 | - | n/a |
| exon | exon:Solyc09g010370.2.1.9 | SL2.50ch09:3753893..3754252 | 360 | - | n/a |
| intron | intron:Solyc09g010370.2.1.2 | SL2.50ch09:3758815..3758937 | n/a | - | n/a |
| intron | intron:Solyc09g010370.2.1.3 | SL2.50ch09:3756461..3758699 | n/a | - | n/a |
| intron | intron:Solyc09g010370.2.1.4 | SL2.50ch09:3755789..3756387 | n/a | - | n/a |
| intron | intron:Solyc09g010370.2.1.5 | SL2.50ch09:3755531..3755687 | n/a | - | n/a |
| intron | intron:Solyc09g010370.2.1.6 | SL2.50ch09:3755122..3755464 | n/a | - | n/a |
| intron | intron:Solyc09g010370.2.1.7 | SL2.50ch09:3754927..3755023 | n/a | - | n/a |
| intron | intron:Solyc09g010370.2.1.8 | SL2.50ch09:3754788..3754863 | n/a | - | n/a |
| intron | intron:Solyc09g010370.2.1.9 | SL2.50ch09:3754253..3754694 | n/a | - | n/a |
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