Solanum lycopersicum mRNA Solyc09g010210.2.1

mRNA details  
Name
Solyc09g010210.2.1
Type
mRNA
Length
1,732
Organism
Solanum lycopersicum
Description
Endoglucanase 1 (AHRD V1 ***- B6TRZ3_MAIZE); contains Interpro domain(s) IPR008928 Six-hairpin glycosidase-like IPR012341 Six-hairpin glycosidase IPR018221 Glycoside hydrolase, family 9, active site IPR001701 Glycoside hydrolase, family 9
Location(s)
SL2.50ch09:3596732..3601979
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005975
  • GO:0003824
Length
5248
Nb exon
7
Sifter term
GO:0004553
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g010210.2.1 Endoglucanase 1 (AHRD V1 ***- B6TRZ3_MAIZE); contains Interpro domain(s) IPR008928 Six-hairpin glycosidase-like IPR012341 Six-hairpin glycosidase IPR018221 Glycoside hydrolase, family 9, active site IPR001701 Glycoside hydrolase, family 9

ATGGCGCCAAAATATACCTCCATCATTTTCCTCTTCCTTCTCTTCAACTCCTTTTCATGTTCATTCGGAGGGGGTCATGATTATCATGACGCCCTCCGAAAAAGCATCCTGTTCTACGAAGGACAACGATCCGGAAAATTACCGCCGGATCAACGTATCAAATGGCGTAGAGACTCCGCATTACACGACGGTGCTTCCGCCGGAGTTGATTTGACAGGAGGCTATTACGATGCCGGAGATAATGTGAAATTTGTTTTTCCGATGGCGTTTACGACGACATTGTTATCGTGGAGTATAATTGATTTTAAAAGGAATATAGGGAATGAATTGGGTAATGCAGTGAAGGCGGTGAAATGGGGAACTGATTTTCTGTTGAAAGCTACGGCGAGAGATGGAGTGATATATGTACAAGTTGGTGATGCGTTTTCAGATCACAGTTGTTGGGAGAGACCAGAAGATATGGATACATTAAGAACTGTTTATAAAATTGATGCGAATAATCCCGGTTCCGATGTCGCCGGTGAAATCGCTGCTGCATTAGCTGCTGCATCCATTGTTTTCCGTTCACTGGATTCTTCCTACTCAAATCTACTGCTTGATCGCGCTGTTAAAGTTTTCGATTTTGCCAATAGACATAGAGGTGCATACAGCTCCAGCCTACACTCTGCTGTTTGCCCTTTCTATTGTGACTTTAATGGTTATCAGGATGAATTGCTTTGGGGTGCAGCATGGTTACATAAAGCAACAAGAAGAAGGCAATATAGAGAGTACATAGTGAAAAATGAAGTAATTTTAAGAGCAGGAGATACAATTAATGAATTTGGTTGGGACAACAAACATGCTGGTATTAATGTCCTTATTTCCAAGGAAGTGTTAATGGGAAAAGCACCAGATCTAAAATCATTTCAAGTAAATGCAGATGCATTCATTTGTTCAATATTACCTGGAATTTCTCATCCCCAAGTCCAATATTCTCCAGGTGGACTCATTGTCAAACCTGGGGTTTGTAACATGCAGCATGTGACATCTTTGTCCTTCTTACTCTTAACTTATTCTAATTATCTTAGTCATGCCAATCATGTTGTGCCATGTGGTTCCATGACAGCCACCCCTGCCCTCCTCAAACACATTGCCAAACGTCAGGTGGATTATATTCTGGGAGATAATCCTCAAAGAATGTCATATATGGTAGGGTATGGTCCACATTACCCACAAAGGATTCACCATAGGGGTAGCTCTGTGCCATCTGTGGCCACACATTCAGCACGTATTGGTTGCAAAGAGGGATCTCGATACTTTTTTTCACCAAACCCAAACCCAAATCGATTAATTGGTGCTGTTGTTGGAGGGCCAAATTTAACAGACTCGTTCCCAGACGCCAGACCCTATTTTCAAGAATCTGAGCCCACAACATATGTTAATGCACCATTAGTGGGCCTATTGGCTTACTTTGCAGCCCATTCTAATTGATATAAACATGTGTAAAGAGAGAATGTAGTGGTGTGCAAAGGCCACCCTCTCTATTATTGTGTTGTTGTTGTCTAATAGGACTAATGTTGTTGTTTTTTAATCCCACTATATATATATATATTATATTAATACAAAAAAAGAATATCTTATCCCATCTTTTGTCTAAGAAAAAGAAAGATATCTAATGAACAAGGGATTTGTACTTTTGAAATTGTAGTGGAAGTTGTTTTTATCTTATTATACATGAAAATTGTTTTGAATA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g010210.2.1SL2.50ch09:3596731..3601717490+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g010210.2SL2.50ch09:3596732..36019795,248+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g010210.2.1.1SL2.50ch09:3596732..3596935204+n/a
exonexon:Solyc09g010210.2.1.2SL2.50ch09:3597025..3597432408+n/a
exonexon:Solyc09g010210.2.1.3SL2.50ch09:3598112..359820493+n/a
exonexon:Solyc09g010210.2.1.4SL2.50ch09:3598884..3599045162+n/a
exonexon:Solyc09g010210.2.1.5SL2.50ch09:3600402..3600513112+n/a
exonexon:Solyc09g010210.2.1.6SL2.50ch09:3600613..3600776164+2
exonexon:Solyc09g010210.2.1.7SL2.50ch09:3601391..3601979589+n/a
intronintron:Solyc09g010210.2.1.1SL2.50ch09:3596936..3597024n/a+n/a
intronintron:Solyc09g010210.2.1.2SL2.50ch09:3597433..3598111n/a+n/a
intronintron:Solyc09g010210.2.1.3SL2.50ch09:3598205..3598883n/a+n/a
intronintron:Solyc09g010210.2.1.4SL2.50ch09:3599046..3600401n/a+n/a
intronintron:Solyc09g010210.2.1.5SL2.50ch09:3600514..3600612n/a+n/a
intronintron:Solyc09g010210.2.1.6SL2.50ch09:3600777..3601390n/a+n/a
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Related viewsNone found
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