Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Solanum lycopersicum mRNA Solyc08g083240.2.1

mRNA details  
Name
Solyc08g083240.2.1
Type
mRNA
Length
1,804
Organism
Solanum lycopersicum
Description
Calmodulin-binding protein family-like (AHRD V1 **-* Q6YXT2_ORYSJ); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region
Location(s)
SL2.50ch08:65757263..65759544
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
2282
Nb exon
5
Sifter term
GO:0005516
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g083240.2.1 Calmodulin-binding protein family-like (AHRD V1 **-* Q6YXT2_ORYSJ); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region

CACGGATAAAATAAATACGCACACTTGAGACATCAGTCATTTCTCTCCCTCCCTTTATTTATTGTTTCAGGAGCTAAAGGCTTTTGCCCACCACTCTCTCTTCTTCTATCTATATATGTCGCTTTAACCAAAGCAATTTCTACCTCTCAATGGGAAAGAAAAAGGGTGCTACTTCATGGTTGAGTGCTGTAAAGAGGGCTTTCAGGTCACCAACTAAAGATAACAGCTGCGACAAAAAGGCAAAAATAGAGCATCAACTAGACGAAGATGAAGAAAAGAAAAGAGACAAGAGAAGGTGGTTATTCAGAAAACAGTCACAAAGTGAAGGGAAGGCAATGGTTGATCCAAAGCATGCAATTGCACCTGAAGCTGCTGTGGCCACGGATCAAGCAGCACTTGAGATCATAAGGTTGACACGATCTAACAAGTATTCACCTTCAAATAATGCTGCTGTGCTCATCCAAACAGCATTCAGAGGATATCTGGCAAGGAGGGCACTAATTGCATTGAAGGGGATAGTGAAGCTTCAAGCATTAATAAGGGGTCAAAATGTCCGGAAGCAAGCTAAGATGACACTCAAATGTATGCAAGCTCTGCTTAGGGTGCAGGCTCGGGTTCGTGAACAACGTGCTCGCCTTTCACACGATGGAGGCCGCAGGTCCATGTTTGCTGAAACAACGAATTTATGGGACTCTAAATATCTTCGTGACATCCGAGATAGGAATTCCAGATCTAGAGATGGAAGCTCAATTGCAGACGATTGTCCGAGATCACTTGTAGAGCTGGAATCAATGTTACAAGCCAGAAAAGAAGCCTCCTTCAAGCGGGAAAAATCCCTTGCTCATGCTTTTACTCAACAGGAATTGGATGAGATGGATATTGTTTGTAGTGAAGAAAGAAATGAAAGGGAATTAGAAGAGACAGCGAATTGGCTAGACGAGTGGATGTCATCAAAGCAATGGAACAGAGGTTCATTTGACAGAAGAGACTCTATAAAGACTGTTGAGATGGACACGGCTAAGCCATATTGTAACATGGTTCCAAATGCTCGAAGATCACAACACTCTAGCCCACTTCACAGACAGGCTAGTAGTCCTCATTATACTGCTAATTCTCCCCATCACCAGAGATCATCACATTACAATTACTCGGCAATTCAACCACCAGCCACCCCACCCCCTTGTCAACCAAAACCTCTTCAAATGCGCTCAACAAGCCCACGTAAAAGCCAATCAACTGCAAACACTCCATGCCTACGCTCAACGAGCCGTTCAAACAGTATAATGTCCCGGTATAGTACTTCAGGAAATGATGCATCAGTTCCTAACTATATGGCTGCCACTGAGTCAGCAAAAGCTCGGATTCGTTCACAAAGCACACCTAAACAAAGACCTTCCACACCAGAAAGAGAAAGAGTTGGAGCGGTGAAAAAACGGCTGTCTTACCCTATTCCTGAGCCATACACTGGGTATGGCTACAGTCAGAACTTGAGAAGTCCTAGCTTCAAAAGTCTTCAAGCTGCGTATGTTGGGATGGAACAACAATCATGTTACACGGACAGCCTTGGTGGAGAAATTTCTCCTTGTTCAACTACTGATTTAAGGAGATGGTTAAGATGAGAAAGATTACTGGAATTAACCAAAGCCATCCTGTGTGTCCTAGCCAGGAAAAATCAGGGTGCTAGGTGAATGCTGTCAGCCCTGATGTGTATTTCTTTTCTTCATTTTCTCTAGTGGATTCATTATGCACCTAGGAATTATAATCACATTTCAAATCCAAACTAATACTAACTACTACTTAAATT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g083240.2.1SL2.50ch08:65757447..65759395490-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g083240.2SL2.50ch08:65757263..657595442,282-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g083240.2.1.1SL2.50ch08:65759267..65759544278-n/a
exonexon:Solyc08g083240.2.1.2SL2.50ch08:65758988..65759194207-n/a
exonexon:Solyc08g083240.2.1.3SL2.50ch08:65758525..65758770246-n/a
exonexon:Solyc08g083240.2.1.4SL2.50ch08:65758294..65758422129-n/a
exonexon:Solyc08g083240.2.1.5SL2.50ch08:65757263..65758206944-n/a
intronintron:Solyc08g083240.2.1.2SL2.50ch08:65759195..65759266n/a-n/a
intronintron:Solyc08g083240.2.1.3SL2.50ch08:65758771..65758987n/a-n/a
intronintron:Solyc08g083240.2.1.4SL2.50ch08:65758423..65758524n/a-n/a
intronintron:Solyc08g083240.2.1.5SL2.50ch08:65758207..65758293n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17917318%2Fdetails feature 17917318
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)