Solanum lycopersicum mRNA Solyc08g081010.2.1
 mRNA details
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| Name | Type |
Length
2,092
|
Organism |
|
Description
Glutamate-cysteine ligase (AHRD V1 **** Q7Y0R4_BRAJU); contains Interpro domain(s) IPR011556 Glutamate--cysteine ligase, plant
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Location(s)
SL2.50ch08:64141398..64149331
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0006750
- Length
- 7934
- Nb exon
- 16
- Sifter term
- GO:0004357
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc08g081010.2.1 Glutamate-cysteine ligase (AHRD V1 **** Q7Y0R4_BRAJU); contains Interpro domain(s) IPR011556 Glutamate--cysteine ligase, plant
CCATTCTTTTTCATTCAATCTGCTAGCAGTTGTCTCTCTTTATAGCTAAACAAAAATTAAAGAAATGGGAGTGATAAAGCTCTAGCCGCCTCAGCACACCAAAATCCTAATCATTTTGCTGATACCCAATTGTCTCTATATATATATTGGAAGGTTTTCTTTCAATTTTCAGTCAATTCTATAGAACAAACCCTACAAAGTCTTAATTTTTCCAGTTTACTGAGCCAAGGCACAAAGCATGGCCTTGATGTCTCAGGCAGGTTCTTCACATTGCATTTACTCTGAAAAGGTAAGATGTATCAGTGGACATAGAAGCATCATTAACAATATGGATATGTTCAGAATGCGGGAGATATGCTTTGGCGTGGATATTTCTTCACGCAATGCCTCAAGACGAGTGCAAGGGAATTATTTGAATCACATAGGAGTGGGAAGTAGACGTGGAGACCTGACAATTGTAGCTGCAAGTCCTCCAACAGAGGATGCTGTTGTTGCAGCAGAGCCGTTAACAAAAGAAGATCTTGTAGGATATCTTGCTTCTGGATGCAAATCCAAAGAAAAGTGGAGGATAGGCACTGAACATGAAAAGTTTGGTTTCGAGTTTGGAACCCTGCGACCCATGAAGTATGATCAAATAGCTGACTTGCTAAATGGTATTGCTGAGCGGTTTGATTGGGAAAAAGTAATGGAGGGTGACAAGATTATTGGCCTGAAACAGGGAAAGCAAAGCATATCATTAGAACCTGGTGGTCAGTTTGAGCTTAGTGGTGCACCACTTGAAACACTGCATCAAACTTGTGCAGAGGTTAATTCACATCTTTACCAGGTTAAAGCTGTTGCAGAAGAGATGGGAATTGGATTCTTAGGAACTGGATTCCAGCCAAAGTGGGGGCTGAAAGATATACCAATAATGCCGAAGGGGAGATATGAGATTATGAGAAATTACATGCCTAAAGTTGGCTCACTTGGGCTGGATATGATGTTTAGAACATGCACTGTTCAGGTAAATCTGGACTTCAGTTCTGAAGCTGACATGATCAGAAAGTTCCGTGCTGGTCTTGCCTTGCAGCCTATTGCTACAGCTCTATTTGCAAATTCACCTTTCACTGAAGGAAAACCTAATGGTTATCTCAGCAAGAGAAGCCACATTTGGACCGATACAGATAATAACCGCGCTGGGATGCTTCCTTTCGTCTTTGATGACTCTTTTGGGTTTGAGCAATATGTAGATTATGCACTTGATGTCCCAATGTATTTTGTCTATCGGAAGAAGAAGTATGTTGATTGTACTGGATTGTCTTTCCGGGACTTCATGAATGGAAAACTTCCGCCCATTCCCGGCGAATACCCTACTCTTAATGATTGGGAGAATCATCTCACAACAATATTTCCTGAGGTCAGACTCAAAAGATATCTGGAAATGAGAGGTGCTGATGGAGGGCCTTGGAGACGGTTATGCGCATTGCCTGCATTCTGGGTGGGTATACTCTACGATGAGGGGTCTTTGCAAAGCGTTTTGGACATGACATTTGATTGGACTGCAGAAGAAAGAGACATGTTAAGGAATAAGGTGCCAAAAAGTGGTCTGAAGACACCATTTCGAGATGGATTGCTTATGCATGTTGCTCAAGATGTTGTCAAGTTGGCAAAGGAAGGCTTGGAAAGAAGAGGCTTTAAGGAAACAGGATTTCTGAACGAAGTAGCCGAGGTTGTTAAAACAGGTGTAACACCAGCTGAGAAGCTACTGGAATTGTACCATGGGAAGTGGGGACAAAGTGTGGATCCTATCTTTGAGGAGCTTCTCTACTGAAGTTGTTTGAGAGTGCAATTTCAATTCTGTCTTTTTCCTGTGTTGTAAATGATTTCTCAATTTCATTGAGAGTTATATCAGCCGATTTTTCCATCGTTAGACAAATAATCTAGCTAGCTAGATTAAGATATGTTACATGTATCTATGGCTCGAAAACGTCATATGTAGCTCTCTCCCCTTGGGATGTGATCAATCTGGTTCCAGATAGCATTTGTATACATTTTCCCCAGAAAAGTAACATAGCAATGCTAAAGTAATAAATGAATCTATTGGCTGACCAAC
CCATTCTTTTTCATTCAATCTGCTAGCAGTTGTCTCTCTTTATAGCTAAACAAAAATTAAAGAAATGGGAGTGATAAAGCTCTAGCCGCCTCAGCACACCAAAATCCTAATCATTTTGCTGATACCCAATTGTCTCTATATATATATTGGAAGGTTTTCTTTCAATTTTCAGTCAATTCTATAGAACAAACCCTACAAAGTCTTAATTTTTCCAGTTTACTGAGCCAAGGCACAAAGCATGGCCTTGATGTCTCAGGCAGGTTCTTCACATTGCATTTACTCTGAAAAGGTAAGATGTATCAGTGGACATAGAAGCATCATTAACAATATGGATATGTTCAGAATGCGGGAGATATGCTTTGGCGTGGATATTTCTTCACGCAATGCCTCAAGACGAGTGCAAGGGAATTATTTGAATCACATAGGAGTGGGAAGTAGACGTGGAGACCTGACAATTGTAGCTGCAAGTCCTCCAACAGAGGATGCTGTTGTTGCAGCAGAGCCGTTAACAAAAGAAGATCTTGTAGGATATCTTGCTTCTGGATGCAAATCCAAAGAAAAGTGGAGGATAGGCACTGAACATGAAAAGTTTGGTTTCGAGTTTGGAACCCTGCGACCCATGAAGTATGATCAAATAGCTGACTTGCTAAATGGTATTGCTGAGCGGTTTGATTGGGAAAAAGTAATGGAGGGTGACAAGATTATTGGCCTGAAACAGGGAAAGCAAAGCATATCATTAGAACCTGGTGGTCAGTTTGAGCTTAGTGGTGCACCACTTGAAACACTGCATCAAACTTGTGCAGAGGTTAATTCACATCTTTACCAGGTTAAAGCTGTTGCAGAAGAGATGGGAATTGGATTCTTAGGAACTGGATTCCAGCCAAAGTGGGGGCTGAAAGATATACCAATAATGCCGAAGGGGAGATATGAGATTATGAGAAATTACATGCCTAAAGTTGGCTCACTTGGGCTGGATATGATGTTTAGAACATGCACTGTTCAGGTAAATCTGGACTTCAGTTCTGAAGCTGACATGATCAGAAAGTTCCGTGCTGGTCTTGCCTTGCAGCCTATTGCTACAGCTCTATTTGCAAATTCACCTTTCACTGAAGGAAAACCTAATGGTTATCTCAGCAAGAGAAGCCACATTTGGACCGATACAGATAATAACCGCGCTGGGATGCTTCCTTTCGTCTTTGATGACTCTTTTGGGTTTGAGCAATATGTAGATTATGCACTTGATGTCCCAATGTATTTTGTCTATCGGAAGAAGAAGTATGTTGATTGTACTGGATTGTCTTTCCGGGACTTCATGAATGGAAAACTTCCGCCCATTCCCGGCGAATACCCTACTCTTAATGATTGGGAGAATCATCTCACAACAATATTTCCTGAGGTCAGACTCAAAAGATATCTGGAAATGAGAGGTGCTGATGGAGGGCCTTGGAGACGGTTATGCGCATTGCCTGCATTCTGGGTGGGTATACTCTACGATGAGGGGTCTTTGCAAAGCGTTTTGGACATGACATTTGATTGGACTGCAGAAGAAAGAGACATGTTAAGGAATAAGGTGCCAAAAAGTGGTCTGAAGACACCATTTCGAGATGGATTGCTTATGCATGTTGCTCAAGATGTTGTCAAGTTGGCAAAGGAAGGCTTGGAAAGAAGAGGCTTTAAGGAAACAGGATTTCTGAACGAAGTAGCCGAGGTTGTTAAAACAGGTGTAACACCAGCTGAGAAGCTACTGGAATTGTACCATGGGAAGTGGGGACAAAGTGTGGATCCTATCTTTGAGGAGCTTCTCTACTGAAGTTGTTTGAGAGTGCAATTTCAATTCTGTCTTTTTCCTGTGTTGTAAATGATTTCTCAATTTCATTGAGAGTTATATCAGCCGATTTTTCCATCGTTAGACAAATAATCTAGCTAGCTAGATTAAGATATGTTACATGTATCTATGGCTCGAAAACGTCATATGTAGCTCTCTCCCCTTGGGATGTGATCAATCTGGTTCCAGATAGCATTTGTATACATTTTCCCCAGAAAAGTAACATAGCAATGCTAAAGTAATAAATGAATCTATTGGCTGACCAAC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc08g081010.2.1 | SL2.50ch08:64141679..64148166 | 524 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc08g081010.2 | SL2.50ch08:64141398..64149331 | 7,934 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc08g081010.2.1.1 | SL2.50ch08:64149103..64149331 | 229 | - | n/a |
| exon | exon:Solyc08g081010.2.1.10 | SL2.50ch08:64143408..64143501 | 94 | - | n/a |
| exon | exon:Solyc08g081010.2.1.11 | SL2.50ch08:64143247..64143336 | 90 | - | n/a |
| exon | exon:Solyc08g081010.2.1.12 | SL2.50ch08:64143077..64143157 | 81 | - | n/a |
| exon | exon:Solyc08g081010.2.1.13 | SL2.50ch08:64142744..64142836 | 93 | - | n/a |
| exon | exon:Solyc08g081010.2.1.14 | SL2.50ch08:64142078..64142158 | 81 | - | n/a |
| exon | exon:Solyc08g081010.2.1.15 | SL2.50ch08:64141927..64141996 | 70 | - | 2 |
| exon | exon:Solyc08g081010.2.1.16 | SL2.50ch08:64141398..64141768 | 371 | - | n/a |
| exon | exon:Solyc08g081010.2.1.2 | SL2.50ch08:64147838..64148175 | 338 | - | 1 |
| exon | exon:Solyc08g081010.2.1.3 | SL2.50ch08:64146985..64147135 | 151 | - | n/a |
| exon | exon:Solyc08g081010.2.1.4 | SL2.50ch08:64146684..64146791 | 108 | - | n/a |
| exon | exon:Solyc08g081010.2.1.5 | SL2.50ch08:64146144..64146236 | 93 | - | n/a |
| exon | exon:Solyc08g081010.2.1.6 | SL2.50ch08:64144879..64144962 | 84 | - | n/a |
| exon | exon:Solyc08g081010.2.1.7 | SL2.50ch08:64144598..64144666 | 69 | - | n/a |
| exon | exon:Solyc08g081010.2.1.8 | SL2.50ch08:64144448..64144518 | 71 | - | 1 |
| exon | exon:Solyc08g081010.2.1.9 | SL2.50ch08:64144295..64144363 | 69 | - | 1 |
| intron | intron:Solyc08g081010.2.1.10 | SL2.50ch08:64143502..64144294 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.11 | SL2.50ch08:64143337..64143407 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.12 | SL2.50ch08:64143158..64143246 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.13 | SL2.50ch08:64142837..64143076 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.14 | SL2.50ch08:64142159..64142743 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.15 | SL2.50ch08:64141997..64142077 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.16 | SL2.50ch08:64141769..64141926 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.2 | SL2.50ch08:64148176..64149102 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.3 | SL2.50ch08:64147136..64147837 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.4 | SL2.50ch08:64146792..64146984 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.5 | SL2.50ch08:64146237..64146683 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.6 | SL2.50ch08:64144963..64146143 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.7 | SL2.50ch08:64144667..64144878 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.8 | SL2.50ch08:64144519..64144597 | n/a | - | n/a |
| intron | intron:Solyc08g081010.2.1.9 | SL2.50ch08:64144364..64144447 | n/a | - | n/a |
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