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Solanum lycopersicum mRNA Solyc08g079870.1.1

mRNA details  
Name
Solyc08g079870.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc08g079870.1.1
Length
2,238
  
Description
Subtilisin-like protease (AHRD V1 **-- Q9LWA3_SOLLC); contains Interpro domain(s) IPR015500 Peptidase S8, subtilisin-related IPR000209 Peptidase S8 and S53, subtilisin, kexin, sedolisin
Location(s)
SL2.50ch08:63300441..63302678
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0043086
Length
2238
Nb exon
1
Sifter term
GO:0004252
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g079870.1.1 Subtilisin-like protease (AHRD V1 **-- Q9LWA3_SOLLC); contains Interpro domain(s) IPR015500 Peptidase S8, subtilisin-related IPR000209 Peptidase S8 and S53, subtilisin, kexin, sedolisin

ATGGGATTATTGAAAATCCTTCTTGTTTTCATCTTCTGTTCTTTCCAATGGCCTACTATTCAGAGTAATCTCGAGACTTATATCGTCCATGTTGAATCCCCTGAAAGCCTAGTTACTACTCAATCATTGTTAACGGATTTAGGTAGCTATTACCTTTCTTTTTTGCCTAAAACTGCTACCACAATTAGTTCGAGTGGAAATGAAGAGGCTGCTACCATGATCTATTCCTATCACAATGTGATGACAGGGTTTGCAGCAAGATTAACTGCAGAACAAGTGAAGGAAATGGAGAAAAAACACGGCTTTGTCTCTGCTCAGAAACAGAGGATTTTGTCTTTGCACACTACTCATACTCCAAGTTTTCTTGGTTTGCAGCAGAACATGGGTGTATGGAAGGATTCCAACTATGGGAAAGGCGTGATCATCGGAGTTATAGACACTGGAATTATTCCTGACCATCCTTCTTTTAGCGATGTTGGGATGCCTCCCCCGCCTGCTAAGTGGAAAGGAGTTTGTGAGTCCAATTTCACCAATAAGTGTAACAACAAGCTCATTGGAGCCAGGTCTTACCAACTTGGTAATGGTTCCCCGATAGATAGTATTGGACATGGTACACACACAGCAAGCACAGCTGCAGGAGCCTTTGTGAAAGGTGCTAATGTATATGGCAATGCTGATGGAACTGCAGTTGGTGTTGCTCCTCTAGCCCATATAGCCATATATAAGGTGTGTAATTCTGTTGGTTGTTCTGAAAGTGATGTTTTAGCTGCCATGGATTCAGCTATAGATGATGGAGTAGATATTCTTTCAATGTCCCTTAGTGGAGGTCCAATCCCTTTCCATAGAGACAATATTGCTATCGGGGCGTACAGTGCAACGGAAAGAGGAATTCTTGTAAGTTGTTCTGCTGGAAATAGTGGTCCATCCTTTATCACAGCAGTAAACACCGCCCCTTGGATTCTTACGGTAGGTGCCAGCACGCTTGACAGAAAGATAAAAGCTACTGTTAAGCTTGGAAATGGAGAGGAATTTGAAGGAGAATCTGCTTATCGTCCAAAGATTTCCAACGCAACATTCTTCACTCTATTTGATGCTGCAAAAAATGCAAAAGATCCATCCGAAACCCCTTATTGCAGACGAGGTTCACTCACTGACCCTGCTATAAGAGGAAAGATAGTATTATGTTCAGCACTCGGCCATGTAGCCAATGTTGATAAAGGACAAGCTGTGAAGGATGCTGGAGGTGTTGGCATGATTATCATCAACCCATCACAATATGGTGTCACTAAATCAGCTGATGCTCATGTTCTTCCAGCATTGGTTGTTTCAGCTGCAGACGGAACAAAAATTCTTGCTTACATGAACTCAACATCAAGCCCTGTTGCTACAATTGCATTCCAAGGAACAATAATTGGAGACAAAAATGCTCCTATGGTTGCTGCATTTTCCTCAAGAGGACCAAGTAGAGCTAGTCCTGGAATCTTGAAGCCTGACATAATCGGTCCTGGTGCTAATATCCTTGCTGCTTGGCCTACCTCCGTGGATGACAACAAGAACACCAAATCCACATTCAATATCATATCAGGCACCTCAATGTCTTGCCCTCACCTTAGTGGCGTAGCAGCTCTGCTGAAATGCACACATCCTGATTGGTCTCCTGCTGTTATTAAGTCTGCAATGATGACAACGGCTGACACGTTAAACCTTGCTAATAGTCCAATACTCGATGAAAGGCTCCTTCCTGCTGACATCTATGCAATTGGTGCAGGACATGTTAATCCATCAAGGGCAAATGATCCAGGACTAGTTTATGATACACCATTCGAGGACTATGTACCTTATTTATGTGGTTTGAAGTACACAGATCAACAGGTAGGTAACCTGATACAACGCAGGGTGAATTGCTCGGAGGTGAAAAGTATCCTTGAAGCACAATTAAACTATCCTTCGTTTTCCATATTTGGACTTGGATCAACTCCTCAGACATATACCAGAACTGTAACCAATGTTGGTGATGCTACATCATCTTACAAAGTGGAGGTAGCTTCACCAGAAGGCGTTGCCATCGAAGTTGAACCCTCCGAGCTAAATTTCTCCGAGTTGAACCAGAAGTTGACATACCAAGTGACATTTTCCAAGACAACTAATAGCTCAAACCCTGAGGTTATTGAGGGATTCTTGAAGTGGACTTCTAATAGGCACTCAGTGAGAAGTCCAATTGCAGTTGTGTCTGCCTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g079870.1.1SL2.50ch08:63300440..63302678746+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g079870.1SL2.50ch08:63300441..633026782,238+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g079870.1.1.1SL2.50ch08:63300441..633026782,238+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17913436%2Fdetails feature 17913436
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