Solanum lycopersicum mRNA Solyc08g078300.2.1

mRNA details  
Name
Solyc08g078300.2.1
Type
mRNA
Length
1,259
Organism
Solanum lycopersicum
Description
Homeobox-leucine zipper protein (AHRD V1 ***- Q40781_PIMBR); contains Interpro domain(s) IPR006712 HD-ZIP protein, N-terminal
Location(s)
SL2.50ch08:62101579..62103933
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
  • GO:0045449
Length
2355
Nb exon
4
Sifter term
  • GO:0043565
  • GO:0042803
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g078300.2.1 Homeobox-leucine zipper protein (AHRD V1 ***- Q40781_PIMBR); contains Interpro domain(s) IPR006712 HD-ZIP protein, N-terminal

CATATCACTCTCCAAAGTTTTTTTTCTTTTTTTCCTCTCTAAATCAACAACTCCCCATTAATTCTCCTCATCTTTCTTACCTGAAAAAAATAAATAAATTCTTTTCACATCACTGCTCTTTTTTTTAGCTCTATTTTTCTTCAAGAAATCTAAAAAAAAGCAAACAAAAATGATGGTTGAAAAAGAAGATTTGGGGTTAAGCCTTAGCCTTAGTTTTCCAGATAACAATAATAATAACAAGAAGAAGAATACTCAGCTCAATCTTTCACCTTTCAATCTCATTCAAAAAACTTCTTGGACTGATTCCTTATTCCCTTCTTCAGATCGGAACATTGAGACATGTAGAGTGGAGACCAGGACTTTTTTGAAGGGGATAGATGTGAATCGGCTGCCGGCGACGGGAGACGCCGACGAGGAAGCCGGCGTTTCGTCGCCGAACAGTACGATTTCGAGTGTGAGTGGAAATAAGAGAAGTGAAAGAGAAGCAAATAATTGTGATCAAGAGGAACATGAAATGGAAAGAGGTGGTTCTGATGAAGAAGATGGAGAAACTTCTAGAAAGAAATTAAGGCTATCAAAAGACCAATCTGCCATTCTTGAAGAAAGTTTCAAAGAACACAACACACTCAATCCAAAACAAAAGCTGGCTTTGGCTAAAAGACTGGGATTGAGGCCTAGGCAAGTTGAGGTGTGGTTTCAGAATAGGAGGGCAAGGACAAAGTTGAAGCAAACAGAAGTTGACTGTGAGTTTTTGAAAAGATGTTGTGAGAATTTGACAGAGGAAAACAGGAGATTACAAAAAGAAGTTCAAGAGTTGAGGGCATTAAAGCTTTCACCTCAATTCTACATGCAAATGACCCCTCCCACCACCCTCACCATGTGCCCTTCATGTGAGCGTGTCGCGGGCCCACCGCCATCCTCATCTGGGCCCACATCCACACCAATGGGCCAGGCCCAACCCAGGCCCATGCCATTTAACCTATGGGCCAATGCACTACATCCGAGATCATGATTTTGCAAGAAGGGCGATTTGGTCAAATGAAAGTGACAAGACAAACTTGTAATAGTGTACCATAATGTTTTTTGTGTATGAAAAATATGAATATTTATGGTCTAAGATATGGTTGTTGGGACTTGAGAATGGGGGATTTGGTGGGTCAAAGAATCTTTGATTTCTATTATTGACTATATCTTTTTCTTGTATTTACAAATTAGGGTTATTAGTCTTTTTTACTATATTTGGTAGTAAGTACTAATAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g078300.2.1SL2.50ch08:62101825..62103764281-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g078300.2SL2.50ch08:62101579..621039332,355-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g078300.2.1.1SL2.50ch08:62103611..62103933323-2
exonexon:Solyc08g078300.2.1.2SL2.50ch08:62103086..62103396311-n/a
exonexon:Solyc08g078300.2.1.3SL2.50ch08:62102920..6210299980-1
exonexon:Solyc08g078300.2.1.4SL2.50ch08:62101579..62102123545-n/a
intronintron:Solyc08g078300.2.1.2SL2.50ch08:62103397..62103610n/a-n/a
intronintron:Solyc08g078300.2.1.3SL2.50ch08:62103000..62103085n/a-n/a
intronintron:Solyc08g078300.2.1.4SL2.50ch08:62102124..62102919n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17911895%2Fdetails feature 17911895
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)