Solanum lycopersicum mRNA Solyc08g077910.2.1
mRNA details
|
| Name | Type |
Length
1,019
|
Organism |
|
Description
Expansin-like protein (AHRD V1 ***- Q0WRS3_ARATH); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like
|
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Location(s)
SL2.50ch08:61812783..61815044
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005576
- Length
- 2262
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc08g077910.2.1 Expansin-like protein (AHRD V1 ***- Q0WRS3_ARATH); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like
TCATAATCCAAATTAACACTTCTTTACATTTTTTGCTTAAAAAAAATGGCTATCTCTTTCAATAATTGTTCCACTTTTATGATATGTATAATTTTACTTTTGCCTACATTTTCTTTTGGTACTGAAAATTATTATTCTAAAGCTACATTTTATAAGACCTCTGATGGCAAAGGAACACCTACTGGAGCTTGTGGTTATGGAGAGCATGGAAGATATGTCAATGATGGTCTCGTTACCGCCGCGTCATGGAAGCTCTATAAGAATGGAGTTGGATGTGGTGCATGTTATCAGGTGAGGTGCAAGGACGAGGCATTATGTAGCAACGAGGGTGTTAAGGTGTTAGTGACTGACAGTGGTGAGGGGCCTGGAACTGACTTTATTCTCAGCTCAGATGCATTTGCTAAAATGGCTAAGCATCCAAAGCTAGCTCACATGTTGTTCCCAAAGGGAGTGGTTGATGTTGACTACAAAAGAGTTTCTTGCAAATATGGCAATCTCAAAATCAAAATTAATGAACATAGCAACTATCATGGCTACCTTGCTATATTCCTATTTAACAATGGTGGTTATGCTGATATCATAGCAATTGAAATCTACGATGTAAAAACCTACAAATGGATACCGATGAGGAGGTCATATGGAGCAGTTTTTGATTTGGCAAATCCACCAAAGGGAGATCTTAAATTAAGGATTCAAATAAAAGAAGGTGAAAAGACCAAATGGATTAACTCAGACAAAACTGTGATTCCAGATTATTGGAAACCTGGCTCTATTTATGAAACTGATGTTCAGATTCCTTGAACAAATACAAAAAAAAGAATTAAAAAAATTGTCAATTTATATATACTGTGGTTTGGAGTCAAATAAAGTTAATAATTTGTCCAGGGTTATCAGCAGCCATTGTAGTTTTATTTACCAAATGTTTGTGTTAATAAGGCTGACCAAATTAAATTCGTGTAAAAATAAATAAACTACAAGTTTTAATGTACATATGAATGTCCATGTCTATTTATTATCAT
TCATAATCCAAATTAACACTTCTTTACATTTTTTGCTTAAAAAAAATGGCTATCTCTTTCAATAATTGTTCCACTTTTATGATATGTATAATTTTACTTTTGCCTACATTTTCTTTTGGTACTGAAAATTATTATTCTAAAGCTACATTTTATAAGACCTCTGATGGCAAAGGAACACCTACTGGAGCTTGTGGTTATGGAGAGCATGGAAGATATGTCAATGATGGTCTCGTTACCGCCGCGTCATGGAAGCTCTATAAGAATGGAGTTGGATGTGGTGCATGTTATCAGGTGAGGTGCAAGGACGAGGCATTATGTAGCAACGAGGGTGTTAAGGTGTTAGTGACTGACAGTGGTGAGGGGCCTGGAACTGACTTTATTCTCAGCTCAGATGCATTTGCTAAAATGGCTAAGCATCCAAAGCTAGCTCACATGTTGTTCCCAAAGGGAGTGGTTGATGTTGACTACAAAAGAGTTTCTTGCAAATATGGCAATCTCAAAATCAAAATTAATGAACATAGCAACTATCATGGCTACCTTGCTATATTCCTATTTAACAATGGTGGTTATGCTGATATCATAGCAATTGAAATCTACGATGTAAAAACCTACAAATGGATACCGATGAGGAGGTCATATGGAGCAGTTTTTGATTTGGCAAATCCACCAAAGGGAGATCTTAAATTAAGGATTCAAATAAAAGAAGGTGAAAAGACCAAATGGATTAACTCAGACAAAACTGTGATTCCAGATTATTGGAAACCTGGCTCTATTTATGAAACTGATGTTCAGATTCCTTGAACAAATACAAAAAAAAGAATTAAAAAAATTGTCAATTTATATATACTGTGGTTTGGAGTCAAATAAAGTTAATAATTTGTCCAGGGTTATCAGCAGCCATTGTAGTTTTATTTACCAAATGTTTGTGTTAATAAGGCTGACCAAATTAAATTCGTGTAAAAATAAATAAACTACAAGTTTTAATGTACATATGAATGTCCATGTCTATTTATTATCAT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc08g077910.2.1 | SL2.50ch08:61812827..61814826 | 252 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc08g077910.2 | SL2.50ch08:61812783..61815044 | 2,262 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc08g077910.2.1.1 | SL2.50ch08:61812783..61812963 | 181 | + | n/a |
| exon | exon:Solyc08g077910.2.1.2 | SL2.50ch08:61813035..61813144 | 110 | + | n/a |
| exon | exon:Solyc08g077910.2.1.3 | SL2.50ch08:61814233..61814541 | 309 | + | 2 |
| exon | exon:Solyc08g077910.2.1.4 | SL2.50ch08:61814626..61815044 | 419 | + | n/a |
| intron | intron:Solyc08g077910.2.1.1 | SL2.50ch08:61812964..61813034 | n/a | + | n/a |
| intron | intron:Solyc08g077910.2.1.2 | SL2.50ch08:61813145..61814232 | n/a | + | n/a |
| intron | intron:Solyc08g077910.2.1.3 | SL2.50ch08:61814542..61814625 | n/a | + | n/a |
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mRNA details
mRNA details

