Solanum lycopersicum mRNA Solyc08g076100.2.1
 mRNA details
|
| Name | Type |
Length
1,923
|
Organism |
|
Description
BZIP transcription factor 3 (AHRD V1 **** Q94KA7_PHAVU); contains Interpro domain(s) IPR012900 G-box binding, MFMR
|
|
Location(s)
SL2.50ch08:60138940..60148726
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| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005634
- GO:0006355
- Length
- 9787
- Nb exon
- 14
- Sifter term
- GO:0016563
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc08g076100.2.1 BZIP transcription factor 3 (AHRD V1 **** Q94KA7_PHAVU); contains Interpro domain(s) IPR012900 G-box binding, MFMR
ACGCTCCGTCTTGCCAATTTTCCCCCAAAACAAAGCCCTAACTTTCTCTCTCTAAAAATTCTCCCACATTTCTCTCTCTTAATCTTCCATTTTTTTTCCAGAATTTTCCCTCAATTTCACTTCTTTTGATTATTGTTGGGTTCGCTGTTCAAGTTAAAACCAGTCCTTTTCGGAGTTGTACTACAGCTGAAGCAGACCCAAATTTTCAGATTCACTGGTGTCTCTGTTTATCTTCCCGTTTTCGATTTTTCAGTTCGGATTTTGGAGATTACAGCTAGTCAAATAGCAAATCTGTGTGAATGGACACTTGGATGGTTTGAGGAGTGTTTGAGGTAGTGGTGCAGTTTAGCCATGGGGAGCAGTGATATTGACAAATCCTCTAAGGAGGCAAAGGAGTCAAAGGAGACGAAGACTCCCAATTCACAGGAGCAAGCTTCATCTACTGCTACTGGTACAGCAAATCCAGAGTGGCCCGGATTTCAGGGATATTCACCGATGCCTCCACATGGGTTCATGGCTTCAAGTCCTCAAGCACACCCTTACATGTGGGGAGTTCAGCATCTTATGCCACCCTATGGTACTCCACCACATCCTTATGTCACTATGTATCCCCATGGTGGAATATATGCTCATCCATCTATTCCTCCGGGATCATACCCCTTCAGCCCCTTTGCGATGCCTTCTCCAAACGGCGTTGCTGAAGTTGCAGTTAACACCTCTAGCAATACTGAGTTAGATGGTAAATCATCTGAGGTAAAGGAGAAATTGCCCATTAAAAGATCTAAAGGAAGCTTGGGTAGTTTGAATATGATTACAGGCAAGAACACCGAGCTTGGTAAAACGTCTGGAGCATCTGCAAACGGAGTCTACTCTAAAAGTGCCGAGAGTGGAAGTGAAGGCTCAAGCGAAGGAAGTGATGCAAATTCTCAAAATGAGTCACCAATGAAGTCAGCAGGAAGGCAAGATTCAGCTGAAGAAGCATCTCAAAATGGCAATTCTGCTCATAGTTCTCAGAATGGAGGAACTAGTGCTCCTCATTCACTGGTCAACCAAACTATGGCAATCATGCCAATGTCAGCTGTGGGTGCTGGCGGTATTCCTGGCCCCACAACCAACTTGAATATTGGTATGGACTACTGGAATGCCGCTGCTTCGCCGAATATTCCTGCAATCCATGGGAAGGTACCGTCTGCTTCAGTTGCTGGAGGAATAGTTAATGCTGGATCAAGGGATATTGTCCAATCACAAATGTGGATTCAGGATGAAAGGGAGCTCAAGAGGCAGAGAAGAAAGCAGTCCAACAGGGAATCTGCACGTAGGTCTAGGCTACGGAAGCAGGCAGAGTGCGATGAACTAGCACAGCGTGCTGAAGTTCTAAAGGAAGAAAATGCCTCTCTTAGAGCAGAACTGAGTCGTCTAAGGAGTGAGCATGACCAACTTGCTTCTCAGAATGCTTCTCTTAAGGAGAGACTTGGCGAAGTTTCAGGCCGAGATGATCCAAGACCTAGTAGAAATGACATACATCTAAACAAAGATACCCAGCATTCATCACAAACAGAGCCCAAACAGGGTGGTCAGTGAAGTTCTGGCTAGATTATCGTGGATTGAAAAATAGGCTTAACCTAACAAACTTAGTAGTAAGAGTCTTTAATTTGCATATTTATGTAGTTTAACAATCTATGGAAATGTGAGGCTTTTTGGTATCAGGATTCGTTGTCCTATGTTGTCCATTGTTTCTCAGTTTGGACCGATCTTTTATGGTCGAGAAACCTGGATAATATGTAGAGTATGTGACCGATGACTCGTGATAGTTTTGTGCCTAATAGGTGGTGTCTCTGTTTGCTCAAATTTGTATGTACTGATGAAATAGTTGATGAGTCTGCTCTTAGAACTAATGAATTTCCAATATGACTATTATATCCT
ACGCTCCGTCTTGCCAATTTTCCCCCAAAACAAAGCCCTAACTTTCTCTCTCTAAAAATTCTCCCACATTTCTCTCTCTTAATCTTCCATTTTTTTTCCAGAATTTTCCCTCAATTTCACTTCTTTTGATTATTGTTGGGTTCGCTGTTCAAGTTAAAACCAGTCCTTTTCGGAGTTGTACTACAGCTGAAGCAGACCCAAATTTTCAGATTCACTGGTGTCTCTGTTTATCTTCCCGTTTTCGATTTTTCAGTTCGGATTTTGGAGATTACAGCTAGTCAAATAGCAAATCTGTGTGAATGGACACTTGGATGGTTTGAGGAGTGTTTGAGGTAGTGGTGCAGTTTAGCCATGGGGAGCAGTGATATTGACAAATCCTCTAAGGAGGCAAAGGAGTCAAAGGAGACGAAGACTCCCAATTCACAGGAGCAAGCTTCATCTACTGCTACTGGTACAGCAAATCCAGAGTGGCCCGGATTTCAGGGATATTCACCGATGCCTCCACATGGGTTCATGGCTTCAAGTCCTCAAGCACACCCTTACATGTGGGGAGTTCAGCATCTTATGCCACCCTATGGTACTCCACCACATCCTTATGTCACTATGTATCCCCATGGTGGAATATATGCTCATCCATCTATTCCTCCGGGATCATACCCCTTCAGCCCCTTTGCGATGCCTTCTCCAAACGGCGTTGCTGAAGTTGCAGTTAACACCTCTAGCAATACTGAGTTAGATGGTAAATCATCTGAGGTAAAGGAGAAATTGCCCATTAAAAGATCTAAAGGAAGCTTGGGTAGTTTGAATATGATTACAGGCAAGAACACCGAGCTTGGTAAAACGTCTGGAGCATCTGCAAACGGAGTCTACTCTAAAAGTGCCGAGAGTGGAAGTGAAGGCTCAAGCGAAGGAAGTGATGCAAATTCTCAAAATGAGTCACCAATGAAGTCAGCAGGAAGGCAAGATTCAGCTGAAGAAGCATCTCAAAATGGCAATTCTGCTCATAGTTCTCAGAATGGAGGAACTAGTGCTCCTCATTCACTGGTCAACCAAACTATGGCAATCATGCCAATGTCAGCTGTGGGTGCTGGCGGTATTCCTGGCCCCACAACCAACTTGAATATTGGTATGGACTACTGGAATGCCGCTGCTTCGCCGAATATTCCTGCAATCCATGGGAAGGTACCGTCTGCTTCAGTTGCTGGAGGAATAGTTAATGCTGGATCAAGGGATATTGTCCAATCACAAATGTGGATTCAGGATGAAAGGGAGCTCAAGAGGCAGAGAAGAAAGCAGTCCAACAGGGAATCTGCACGTAGGTCTAGGCTACGGAAGCAGGCAGAGTGCGATGAACTAGCACAGCGTGCTGAAGTTCTAAAGGAAGAAAATGCCTCTCTTAGAGCAGAACTGAGTCGTCTAAGGAGTGAGCATGACCAACTTGCTTCTCAGAATGCTTCTCTTAAGGAGAGACTTGGCGAAGTTTCAGGCCGAGATGATCCAAGACCTAGTAGAAATGACATACATCTAAACAAAGATACCCAGCATTCATCACAAACAGAGCCCAAACAGGGTGGTCAGTGAAGTTCTGGCTAGATTATCGTGGATTGAAAAATAGGCTTAACCTAACAAACTTAGTAGTAAGAGTCTTTAATTTGCATATTTATGTAGTTTAACAATCTATGGAAATGTGAGGCTTTTTGGTATCAGGATTCGTTGTCCTATGTTGTCCATTGTTTCTCAGTTTGGACCGATCTTTTATGGTCGAGAAACCTGGATAATATGTAGAGTATGTGACCGATGACTCGTGATAGTTTTGTGCCTAATAGGTGGTGTCTCTGTTTGCTCAAATTTGTATGTACTGATGAAATAGTTGATGAGTCTGCTCTTAGAACTAATGAATTTCCAATATGACTATTATATCCT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc08g076100.2.1 | SL2.50ch08:60139281..60147634 | 410 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc08g076100.2 | SL2.50ch08:60138940..60148726 | 9,787 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc08g076100.2.1.1 | SL2.50ch08:60148489..60148726 | 238 | - | n/a |
| exon | exon:Solyc08g076100.2.1.10 | SL2.50ch08:60140829..60140865 | 37 | - | 2 |
| exon | exon:Solyc08g076100.2.1.11 | SL2.50ch08:60140453..60140742 | 290 | - | n/a |
| exon | exon:Solyc08g076100.2.1.12 | SL2.50ch08:60139932..60140009 | 78 | - | n/a |
| exon | exon:Solyc08g076100.2.1.13 | SL2.50ch08:60139733..60139858 | 126 | - | n/a |
| exon | exon:Solyc08g076100.2.1.14 | SL2.50ch08:60138940..60139398 | 459 | - | n/a |
| exon | exon:Solyc08g076100.2.1.2 | SL2.50ch08:60148167..60148238 | 72 | - | n/a |
| exon | exon:Solyc08g076100.2.1.3 | SL2.50ch08:60147560..60147675 | 116 | - | n/a |
| exon | exon:Solyc08g076100.2.1.4 | SL2.50ch08:60147399..60147455 | 57 | - | n/a |
| exon | exon:Solyc08g076100.2.1.5 | SL2.50ch08:60147230..60147304 | 75 | - | n/a |
| exon | exon:Solyc08g076100.2.1.6 | SL2.50ch08:60146882..60146971 | 90 | - | n/a |
| exon | exon:Solyc08g076100.2.1.7 | SL2.50ch08:60146733..60146792 | 60 | - | n/a |
| exon | exon:Solyc08g076100.2.1.8 | SL2.50ch08:60146464..60146633 | 170 | - | 1 |
| exon | exon:Solyc08g076100.2.1.9 | SL2.50ch08:60141122..60141176 | 55 | - | n/a |
| intron | intron:Solyc08g076100.2.1.10 | SL2.50ch08:60140866..60141121 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.11 | SL2.50ch08:60140743..60140828 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.12 | SL2.50ch08:60140010..60140452 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.13 | SL2.50ch08:60139859..60139931 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.14 | SL2.50ch08:60139399..60139732 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.2 | SL2.50ch08:60148239..60148488 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.3 | SL2.50ch08:60147676..60148166 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.4 | SL2.50ch08:60147456..60147559 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.5 | SL2.50ch08:60147305..60147398 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.6 | SL2.50ch08:60146972..60147229 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.7 | SL2.50ch08:60146793..60146881 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.8 | SL2.50ch08:60146634..60146732 | n/a | - | n/a |
| intron | intron:Solyc08g076100.2.1.9 | SL2.50ch08:60141177..60146463 | n/a | - | n/a |
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