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Solanum lycopersicum mRNA Solyc08g075820.2.1

mRNA details  
Name
Solyc08g075820.2.1
Type
mRNA
Length
3,686
Organism
Solanum lycopersicum
Description
RNA-dependent RNA polymerase (AHRD V1 **** B3TNC1_9SOLA); contains Interpro domain(s) IPR007855 RNA-dependent RNA polymerase, eukaryotic-type
Location(s)
SL2.50ch08:59913997..59918193
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
4197
Nb exon
3
Sifter term
  • GO:0003968
  • GO:0003676
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g075820.2.1 RNA-dependent RNA polymerase (AHRD V1 **** B3TNC1_9SOLA); contains Interpro domain(s) IPR007855 RNA-dependent RNA polymerase, eukaryotic-type

ATGGGATCAGAGGATTCTGATATGAATATCGTAGTGACTCAAATTAGTGTTGGTGGATTCGACAATGATGTCAATGCGAAAATGCTTTCGGAATACCTGGAAGAACAAGTTGGACAAGTGTTGAGGTGTAGATTAAAGACTTCATCGACTCCTCCTAAATCATACCCAACTTATCACATTGATGAAGAGAGCATGCAAAGAATGAACGATTACATAAGAGTGGAACCTCATGCATTCGTTCATTTTGCATCTTCAGGGTCTGCAAATTATGCTCTTGCTGCTGCTGGGCGTAATGAACTAATATTAGGAGGGAAGCCTTTGAAGGTTAGTTTGGGTCCTGGGAATCCCCATTGTTTGGATAAGAAGAGAACAGATGAAATGCCCTTAAAGTTTTCAGATGTTAATGTAGAAATTGGAGGATTGGTTAGCAATGATGACTTTGTGGTTGGTTGGAGCGGACCTCCTACTGGTGTGAACTTTCTTGTGGACCGATTCGACGGGACATGCAAAATACTTTTCACAAAGAATACTGTTTTCTCTTTCAAGAATGAAGCAAGACAGGCTGTTATAAAATGCAATTTCAAGATTCAGTTTTTGACTAGGGAAATCAATGAGATAAAGGAATGTAAAGACTTTGCATCTTTTGTAATATTATTGCAGCTGGCTTCATCTCCATTGGTTTTCTATAGAACTGCAGATGATGATGTTGAAGAATCAGTAGCATTTGACTTATTAGACGATGATGATCAATGGATCCGAACTACAGACATTACATGTAGCGGAGCCATTGGTCGGTTTAATACCTACCGTATCTCGATTCGGCCTTGCAATGGTCTTAACTTTGCGAAGGCAAAGAAATATTTTCGTGATAGTAGGGTGCCCGTGGTAGAACCGTGTAACCAAAGGCTCCGGGTGAGAAATGAGCCTAATTTTGGTGTGCCCATGCCAGAACCTTTCTTCTGCATCCAATACCATGATGGTATAAGCTTTAAGGTATTGTTTCTGGTAAATGCGGTTTTGCACAAAGGCATCATTAATCAGCATCAGATGACCAATGATTTCTTTACTTTGCTTAATAAGCATCAAGAGGGGATTAGTGTAGCTGCACTAAAGCACATATTTTCCTTCAAAAGGCCTGTCAATGACGCTGTTAAGAAGTTAGAACACATCCAGACATGGAGGTTGGTGATCACCCCAACCAAAGCATATTGTCTTCCACCGACCGTGGAGCTGTCGAATAGAGTCCTCAGGAACTATAAACATGACGCAGATCGATTTTTGCGAGTTACTTTCATGGACGAGGGCATGCGGAACTTGAATAGGAATGTGATGACGTACTATGCTTCCACCATCGTGAGAGAAATTACGTCAAAAGCTAATCCCCAGAAAACTGCCATCTTTCAAAGGGTGAATACTATGCTGAGTCAAGGATTTTACCTGTGTGGTCGCAGGTACACTTTTCTGGCATTCTCAGCTAACCAGCTGAGGGATCGTTCTGCCTGGTTTTTTGCAGAAAACCCGATAATTAGTGTGCCCAGCATCATAAACTGGATGGGGAGGTTCAGTAACAAGAATGTTGCAAAATATGCTGCTAGGATGGGGCAGTGCTTTTCATCAACCTATGCAACAGTGGAAATCCTTCCGAGTGAGGTTAACTCCAAGCTTCCAGATATAGAAAGAAATGGGTATATTTTCTCTGATGGAATCGGCATGATATCAGCAGATCTTGCTATAGAAGTTGCAGAGAAGTTGCAATTAAGTGTCAATCCTCCTTGTGCTTATCAGATAAGGTATGCTGGTTGTAAAGGTGTTGTCGCATGTTGGCCGGCAAAGAATGATGGTATCCGCCTTTCTGTGAGACCAAGTATGAAGAAATTTGACTCAAATCACACTATCCTTGAAATCTGCTCTTGGACGAGATTACAACCTGGTTTTTTGAACCGGCAAATAATAACCCTGCTCTCATCTTTGAAGGTTAAAGATAAAATATTTTGGGAAATGCAGAATGAAATGTTATCAAGGTTGGATAAAATACTTGTGGATTTGGATGTGGCTTTTGATATCATTACAGGTTCATGTGCTGAGGCAGGAAATACTGCAGCTATAATGTTGAGTGCGGGGTTTAAACCTCAAAGTGAGCCTCATTTAAGAGGGATGTTGTCTAGCATTAGAGCTGCTCAACTTGGCGACCTCAGGAATAAGGCAAGGATATTTGTACCTTCCGGAAGGTGGTTGATGGGCTGTTTGGATGAATTAGGTGAACTTGAGCAAGGCCAATGCTTTATTCAAGTGTCAAGCCCTTCTTTGGAGAGTTGCTTTGTTAAGCATGGTCCAAATTTTTCTGATATCAAGAAAAATCTTCAAGTAATAAAGGGCCTTGTTATAATTGCAAAGAACCCGTGTCTTCATCCAGGGGATGTGAGGATTCTGGAGGCTGTAGATGTTCCTGGTTTACACCATCTCTATGATTGTCTGGTCTTTCCTCAGAAGGGGGATAGGCCACATCCAGATCAAGCATCAGGGAGTGACCTTGACGGTGACCTCTACTTTGTGGCTTGGGATAAAAATCTCATCCCACCCAGTAAGAAAAGCTGGATGCCAATGGACTATGCTCCTGCAGAAGCTAAACAGTTGGGTCGTCAAATTGAACATGCGGACATTATACATTTTTTCTCAAAGAACATGGTTCAAGAGAGCCTAGGAGAAATCTGCAACGCGCATGTGGTTCATGCTGACCTCAGTGAACTTGGAGCTTTGGATGAGAAGTGTCTTAAATTGGCAGAGCTTGCTGCTATAGCTGTAGATTTCCCCAAAACTGGAAAACTTGTCACCATGCCATATAACCTCAGACCAAAAATGTATCCTGACTTCATGGGGAAAGAGGAATTTCAGTCATACACCTCTGAGAAAATTTTGGGTAAATTATATCGGCAAGTTAAAGATGAATCTCAGGGAGAATTTGCTGGACTTGAGTTTGTCCCTGAAGACATCCCATATGATACTAATCTTGAGATCCCAGGATACAAAGATTTCTTAGCTGAAGCATGGAATCGCAAATGTTCTTATGGTATTCAGTTGAATGGACTTTTAGGACAATACAGAGTTAACGGGGAGGAAGAGGTGGTTACTGGACATATATGGTCCATGGCAAACTCCAATTCAAAGAAGCAAGGGGAATTAAAAGCGAGGCTGAAGCAGGCATATAATGCGCTGAGGAAAGAGTTCAGAAATGTTTTCGAGCACATGGAGCCTGATTTTGATCAACTTCCCATTGATGAGAAGAACGATATGTATGAAAGAAAGGCGTCTGCATGGTATCGGGTTACCTACCATCCTCATTGGTTGAATAGAACAGTACTGGAGTTGCAAAAGACAGATGACGTCTCAAATACTGTTATGTTAAGTTTTGCATGGATTGCAGCAGATTACCTTGCTCGAATTAAGATCAGACAAAGGGGAATGCAACAATCCGACTCTACCTCGCGTATCAATTCTCTTGGAAGGTATCTTGTTGACAAGATATCACAACCATTTGGCTGAAAGCCACTCTGCCATTTACTTGTCCATTTTAACAACTAAATAGGGACAGAGGAAGTATTTGTTAATCATGTCTCATTTCTACACAACTTATTGGTACTATGGATTATAGATTTTTGCTATTAAGTTATGAAGACGAATAGGTTGTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g075820.2.1SL2.50ch08:59913996..599180471,180+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g075820.2SL2.50ch08:59913997..599181934,197+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g075820.2.1.1SL2.50ch08:59913997..599151741,178+n/a
exonexon:Solyc08g075820.2.1.2SL2.50ch08:59915237..599167131,477+1
exonexon:Solyc08g075820.2.1.3SL2.50ch08:59917163..599181931,031+n/a
intronintron:Solyc08g075820.2.1.1SL2.50ch08:59915175..59915236n/a+n/a
intronintron:Solyc08g075820.2.1.2SL2.50ch08:59916714..59917162n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17908928%2Fdetails feature 17908928
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