Solanum lycopersicum mRNA Solyc08g065970.2.1

mRNA details  
Name
Solyc08g065970.2.1
Type
mRNA
Length
1,875
Organism
Solanum lycopersicum
Description
RNA polymerase sigma-70 factor (AHRD V1 **** D7LJA3_ARALY); contains Interpro domain(s) IPR013325 RNA polymerase sigma factor, region 2
Location(s)
SL2.50ch08:54369657..54375009
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006355
Length
5353
Nb exon
7
Sifter term
  • GO:0003899
  • GO:0003677
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g065970.2.1 RNA polymerase sigma-70 factor (AHRD V1 **** D7LJA3_ARALY); contains Interpro domain(s) IPR013325 RNA polymerase sigma factor, region 2

ATGGGTTTTAGGCTACATCTCAAATGGGGTTTCTCTCTTCAACCCCCTTTCTCCTCCAATTCATCATCATGGCCTTCTTCACACTCTTTCAAAGGACGGGAAACTTTATACGATCCAGCTAGGTCTCTCAAACCTTTTATCAACGGCGACTGTGAGCCTTCACATAGTGATCCTTTCAGAGTGCAGACTTGCTTATCTGACCCCCAATTGTGGACTAGTGATGCATCAGTAACTACAGAAACAAAGACGCGAAATGGCAGAGGGTCCCCTAGCAATGTATATGGAGATATTGGCAGTTATAAGATTGACGGGGAGAAACCAACATATTTAAATACAACCAAATCTCTTCATTTTAGTTTACTAATGAAAAATCTTGATTTGCTGGAAAACATGTTTGCTGATTCAGAGATGTCAAGATTAGAAAGAGATATTTTAGTGCAACTAGAAAAGCTTGGAGCTTTAGAATTCTTTCATACTTGTCTCTCAAGGACACATCATTCTTCTAGTTTTCCTAAGGTTCTTGATGTGCCAAGGGAGCTAATTAAAGAAGTTGAGAAAGATGATCTTGTCGGAAATGCAATGGATAAGGTTGTCGTACGTTCTAGGAAAAAGCAAGAGCGTATGTCAAGAAGAAAAAGAGCATCCAGAAATGCCAATGACATTATTACAGTGCAGCCGCATACCAAAAATATCCAGGAGGATTTGCAACAGCTTAAGTTCTATTCTGGGAAAAGAACACACGCCTCTAGAACTAAAAGACAGAAAATTGCTAAGAATGAGGCGGAGATGTCAAAAGGTGTTAAGTTGGTGGCACAATTGGAAAGGATCAGGTCAATCCTTGAAGAAGAAACTGGTCAAGTAGCTACTTTCAGTAGCTGGGCAAAAGCTGCTGGGATTGAACAGAAGGAGTTGCAGCAACACTTGCATTTTGGTTGGTATTGCAGGGATGAGCTTCTGAAAAGTACACGGTCCTTGGTCTTATATCTGGCAAGAAACTACAGGGGGCTTGGAGTGGCATTTGAAGACTTAATTCAGGCTGGAAACATGGGTGTTCTACAAGGTGCTGTAAGGTTTGACCACACTAGGGGATACAAATTCTCGACTTACGTTCAGTATTGGATACGAAAATCATTGTCAAAATTGGTGGCACAACATGCTAGAGGGGTTCGAATTCCCTTCACTATATGCAAAGTAATAAATCAAATACATAAAGCTCGAAAAACTCTCAGTAGGAGCCATGGCAAATTTCCAGCTGACGATGAAATTGCCAAGTTCACAGGTCTATCCACAGCTAGAATTGCAATGGCTAGTAAATGTCTGAGAGTTGTTGGTTCAATTGATCAGAAAGTTGGAGATTGCATCAACGCAAAAGTTCTGGAGCTTACACCTGATAAATCAGTTACAAGCCCAGAGGAATTTGTCATGAGGCAAGACATAGTAGACAACATGTATGCACTTTTGGAAAGCTTGGATCCAAAAGAGCAGCAAGTAATATATTTTAGGTTTGGTCTCGAAACTCATCAACGCAAGTCACTCGAGGAGATTGGAAGGCTCTATGGAGTTAGTAAAGAATGGATTAGGAGAATAGAACGACGAGCTCTCACCAAATTAAGAAGCGCGGATTATTTCCAACATATAACTCATTACTCTCTGTAGTTCTAGACACTGCCTAAAACTTTTTGTTTACTAGCTCGTAAACCTGATCGATCTCATTGTAAAATTTCTTGTACACTTCTTTTGTATAGACTAGTCATATAGTACTATTGAAACCTTTGATGTTTTGCATCTTGTATAGTTTAAAGACTGTGTGATGAATAAAATTACTTCATTTTAATGAATGCATTTTCTATATTGATGTTGGAACAGCCTTTGATG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g065970.2.1SL2.50ch08:54369656..54374790552+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g065970.2SL2.50ch08:54369657..543750095,353+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g065970.2.1.1SL2.50ch08:54369657..5436974488+n/a
exonexon:Solyc08g065970.2.1.2SL2.50ch08:54371921..54372078158+2
exonexon:Solyc08g065970.2.1.3SL2.50ch08:54372190..54372747558+n/a
exonexon:Solyc08g065970.2.1.4SL2.50ch08:54372836..54373066231+n/a
exonexon:Solyc08g065970.2.1.5SL2.50ch08:54373499..54373639141+n/a
exonexon:Solyc08g065970.2.1.6SL2.50ch08:54373738..54373938201+n/a
exonexon:Solyc08g065970.2.1.7SL2.50ch08:54374512..54375009498+n/a
intronintron:Solyc08g065970.2.1.1SL2.50ch08:54369745..54371920n/a+n/a
intronintron:Solyc08g065970.2.1.2SL2.50ch08:54372079..54372189n/a+n/a
intronintron:Solyc08g065970.2.1.3SL2.50ch08:54372748..54372835n/a+n/a
intronintron:Solyc08g065970.2.1.4SL2.50ch08:54373067..54373498n/a+n/a
intronintron:Solyc08g065970.2.1.5SL2.50ch08:54373640..54373737n/a+n/a
intronintron:Solyc08g065970.2.1.6SL2.50ch08:54373939..54374511n/a+n/a
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Related viewsNone found
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