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Solanum lycopersicum mRNA Solyc08g062800.2.1

mRNA details  
Name
Solyc08g062800.2.1
Type
mRNA
Length
3,696
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase eIF4A (AHRD V1 **** A8PG49_COPC7); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch08:52091424..52095735
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
4312
Nb exon
4
Sifter term
  • GO:0004004
  • GO:0042802
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g062800.2.1 ATP-dependent RNA helicase eIF4A (AHRD V1 **** A8PG49_COPC7); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGGCTGGCTTGGCACCGGAAGGTTCTCAATTTGATGCTCGTCAATTTGATGCTAAAATGACAGAGCTGCTTGGGACTGAACAGCAGGAGTTCTTTACATCATATGATGAAGTTCATGACAGTTTCGATGCCATGGGTTTGCAAGAAAATCTTCTTAGGGGCATCTATGCCTATGGTTTTGAGAAGCCATCTGCTATCCAGCAAAGGGGTATTGTTCCTTTTTGCAAGGGTCTTGATGTGATTCAACAGGCACAATCTGGTACAGGAAAGACAGCAACTTTCTGCTCTGGGATTCTCCAGCAGCTTGATTACAGCTTAGTCGAATGTCAGGCTCTGGTTCTGGCTCCAACCCGTGAGCTTGCCCAACAGATTGAGAAGGTTATGCGAGCACTTGGTGACTATCTTGGTGTGAAGGTTCATGCCTGTGTAGGAGGTACCAGTGTCCGTGAGGATCAGCGTATCCTTCAAAGTGGTGTTCATGTGGTTGTTGGTACTCCTGGTCGTGTATTTGATATGTTGCGTAGGCAGTCTCTTCGCCCTGACCACATCAAGATGTTTGTTCTGGATGAAGCTGATGAAATGCTCTCAAGAGGTTTCAAGGATCAGATTTATGATATTTTCCAATTGCTGCCACCAAAGATTCAAGTTGGTGTTTTCTCTGCTACAATGCCACCAGAGGCTCTTGAAATTACTAGGAAGTTCATGAACAAGCCTGTGAGGATCCTTGTGAAGCGTGATGAGCTCACTCTTGAAGGTATCAAGCAATTTTATGTCAATGTTGACAAGGAAGAGTGGAAGCTTGAAACTCTTTGCGATCTTTACGAGACCTTAGCCATCACCCAGAGTGTCATCTTTGTGAACACCAGGCGCAAGGTTGATTGGCTCACTGATAAGATGCGCAGCCGTGATCACACAGTATCTGCCACTCATGGAGACATGGACCAGAACACTAGAGATATCATTATGCGAGAGTTCCGATCTGGATCATCTCGTGTGCTCATCACTACTGATCTTCTGGCACGTGGTATTGATGTGCAGCAAGTATCCCTTGTGATTAACTATGACCTGCCTACTCAGCCAGAAAACTACTTGCATCGTATTGGTCGTAGTGGACGATTTGGAAGGAAGGGTGTAGCTATCAATTTTGTCACAAAGGATGATGAAAGGATGCTTTTTGACATTCAGAAGTTTTACAATGTTGTAGTTGAGGAGCTGCCAGCCAATGTGGCCGATCTTCTTTGAGGTGATTTTGGTTCTGTGAGGTGAATTTTTCGTTATATTAAGTAATTTAATATTTTATTGTTAGGTTAGTTAGAGCCGCAGTGGACTAAAACTTGGAAACTGCAGTTTCTGTGATTCGCCGTGGGAATTGTAGTTTTCCAATTTAGTTGGACTTATTTACAAATTTTGTTGGTTTTGTCTTTTTGTATTGTAAGTCCACAACAACTTCAGGTTTTGGATGTCTTTGAATTTAGTATATTTCATTTTAATCCTTGGCCTTTTTTCTTCTTCTTTTTTTTTCGTTTTGTTGTATGGGAACGCTTTTGACGACAATATGTTCGTTCATCTGTATTGTGTGATAGTTTCTGTTTGTGATGCCTTGTATAGGTTTTTTTTTCCTGTGTTGATGACTTGTATCATACTTGGAACTTGAATTGGATAATATTTTTATCAGCTAGAGTATGATTTTGTCTGTATGATTTGCTCTGCATCTGCATCAATCTGTTTTTGTGTCTGTTCGACTGAACTGATATTGATAATTACTAATTATTGTTTTTCCTTCTTAAAAACTTGTTAATAAAGTGTACCAAACAAATTAGTAATTAATAATACTCAAAAGTAATGAATACTAATAAACTCTACTAAATGACCCAATATCATTCCCATCAATAACACTATCTTCAGCCATTACGGTTGGCCATCATCACCACTAGCTATTACCTTTAACTATTATCGATCACCAATGCTAGTCATCAACCACGCCCACAAATGTTAACCACCATCACCATGTTTTTTAAAGAAATACTATTAGTATACTAGTATAATACTATTATTCAAATTTATATTGATTAATTCTAAAACAGAGATAAATTTATACATTGAGAACATAAAGCATATTTGATTATTTAAAATTCAATCTTAACATAATATAATATATTTTCAAAATTTAAAATTTTTAATTAAGTTCAATAAAAGCAAATGGGAACATAGTGCTTGGATAAACTAATTATTATTTCGAGGAATAAGTCATAAACGAAAACTATTTCTTCCCTAATTTTCCATCCAACAGAACGAAAGATTAGTATCCATTGAATTTATTGTTAGGAGTGCATAATGACTTTTTAGGAAAAGGAGACTTTTGAAGAAGTAGTCGTATTTTCTCACTACGTATTTGTGAAAAAATAGTTATTCTACAATGTTTGTTATTTTACAAGATTGAGAAAAAATATTATATTTTCAATTTTATTCTTATCATTAAGAGAATAATATTTGTGAGAATGGAAGATAAGTAAGCGTTGAATTTATTGTAGGAATGCGTAATGACTAATGACATTTAAGGAAGGGAAAGGAGACTTTATCCCTCGTATTTTCTCCCTTCTACGTATTTACTTTAGAAAATTAAGAACAATCTTTCAATTTTTTTCTTATTATCATTAATAGAGTAATATGTTGAAGAAAGATTAGATAAAAGAATAAATTACATTAAGTAATATTTACTAGTATTAATTTTTTCTTAAATGGCTAGAGAAATAAACTACTTTTTTTGACGACAACAACAATAAAATATTCAGTAAATTAGTACAAGTGAGTTTAAGGTAAAGTATATGCATATTTTATCCACTCGGAAAGATAACGAAACTATTTCTGAAAAGCCATTAACTCAAATATAACAATTTCAAATATAAAAAAAAAATCTAACAAGTCACAAAGAAACAATGTCAAGTCTACTGAGGGAAGCAGCAACAGCAACAACAATAACAAAAAAAAGTAGTGGAATAATTAAACACAATAAACAACACCATTAGGATAGAGTGTTAAAACAATAATAAATATGATGGATGTCAAAACCAAGAAATACAGTAATACAACTAGTATAATGAAAGACACCAACTAACCAAAGCAAAACAACACTACATTACCTACTAACTTTCTATTTTAATATATGTCCTTTACACCCGCCTATCTAAGGTCATATACTCGATAATTTGAAGTTGCATCATATTTTGTTCTACCACCTTTCTCAAAATAACTTTTTGATCTACTTCTGCCTCTCCTCTTACATTGTATAATTGACCTTTCGCACCTCCTCACTGGTTCATTCAGACATCTCTACTTCACATGTTCAAATTAAATCATTTCAATCCCGCTTCTCTCATCTTGCCTACCATGGATATCACTACCTTGTAGTCACTTAAAGTTTATTAAATATAAATTTATAAAATTGTTCGGATTATATTAAATTAATGAACATATTAGTCCAAATAAATATTATGGATTAATATAATTAATTTAATTATTTAATTTCAGATAAATATGAATTTAAGTAAAGCCCGCTCCATAAAGTCCATATGATATTTCACTTAAATCTGATTGGCCGAATGGAGTCCTGTTCCAATCACAACTCCTCTTTTTTAAAACTATAAATAGGGGTCTCATAATTCAGAAAAAGGGAACATAAAATTCTAAACAAGAAGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g062800.2.1SL2.50ch08:52091423..52093281414+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g062800.2SL2.50ch08:52091424..520957354,312+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g062800.2.1.1SL2.50ch08:52091424..5209149168+n/a
exonexon:Solyc08g062800.2.1.2SL2.50ch08:52091654..52091760107+1
exonexon:Solyc08g062800.2.1.3SL2.50ch08:52091850..52092280431+2
exonexon:Solyc08g062800.2.1.4SL2.50ch08:52092646..520957353,090+n/a
intronintron:Solyc08g062800.2.1.1SL2.50ch08:52091492..52091653n/a+n/a
intronintron:Solyc08g062800.2.1.2SL2.50ch08:52091761..52091849n/a+n/a
intronintron:Solyc08g062800.2.1.3SL2.50ch08:52092281..52092645n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17902159%2Fdetails feature 17902159
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