Solanum lycopersicum mRNA Solyc08g043170.2.1
 mRNA details
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| Name | Type |
Length
2,479
|
Organism |
|
Description
Gamma-glutamyl phosphate reductase (AHRD V1 ***- D3TQ43_GLOMM); contains Interpro domain(s) IPR005766 Delta l-pyrroline-5-carboxylate synthetase
|
|
Location(s)
SL2.50ch08:22886600..22899430
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0008652
- GO:0008152
- GO:0006561
- GO:0005737
- GO:0055114
- Length
- 12831
- Nb exon
- 20
- Sifter term
- GO:0004349
- GO:0017084
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc08g043170.2.1 Gamma-glutamyl phosphate reductase (AHRD V1 ***- D3TQ43_GLOMM); contains Interpro domain(s) IPR005766 Delta l-pyrroline-5-carboxylate synthetase
AAACTCATATTAGACTAGAAAAGTGGGTGAAGGAAGTTGACTGCACATTTCTGCTCCTACATTTCTCTTCTTCCCTAGAAATGGAGACAGTTGATTCAACTCGAGCATTTGTGAAGAACGTCAAACGACTCATTGTCAAGGTTGGGACTGCAGTTGTGACTCGAGCTGATGGAAGATTAGCACTTGGAAGATTAGGAGCCCTCTGTGAGCAGCTTCAGGAGCTTAATTCGCAAGGGTATGAAGTTATTTTGGTGACTTCTGGTGCTGTAGGTGTTGGTCGTCAGCGGCTTAGATATAGGAAGTTGCTCAACAGCAGTTTTCTTGATCTTCAAAAGCCACAAACTGAGCTTGATGGCAAGGCTTGTGCTGCTGTGGGCCAGAATGGCCTCATGGCTCTGTATGATTCTTTGTTCAGTCAGTTGGATGTGACATCAGCTCAGCTTCTGGTGACTGATAATGACTTTAGAGATCCAGATTTTAGGAGACAACTCAATGACACAGTAAATTCGTTGCTTTCTCTAAAAGTTATACCTATATTCAATGAGAATGATGCTATCAGTACGCGGAGAGCTCCTTATGAGGACTCTTCTGGAATATTTTGGGATAATGACAGTCTGGCAGCTCTTCTAGCTTTGGAATTAAAAGCTGATCTTCTAGTTCTGTTGAGTGATGTAGACGGTCTTTACAGTGGTCCTCCCCGTGATCCAGATTCAAAGTTGATTTACACATACATTAAGGAAATACATGAGAGAGTGATTACTTTTGGAGACAAGTCCAGGGTGGGAAGAGGAGGCATGACTGCCAAAGTAAAAGCTGCTATGTATGCTGCTTATGCTGGCATTCCTGTTGTCATAACCAGTGGCTTTGCGACAGATAACATCATCAAAGTGCTGCATGGGGAACGTATAGGCACACTCTTTCATTGTGATGCCAATAAATGGGCCTCAATTGGAGAGACTGATGCTCGTGAGATGGCAGTGGCTGCAAGGGCATGTTCCAGACGTCTTCAGGCACTGTCTTCCCAAGAAAGGAGTAAAATATTGCAGGATATAGCTGATGCACTGGAAGCAAATGAAAAGGCAATCCTCGCTGAGAATGAAGCTGATGTGGTTGCTGCTCAACAGGCCGGATATGAGAAGTCTTTGATATCTCGTCTGGCTTTAAATCCAGGAAAAATTTCTAGTCTTGCAAACTCAGTTCGTGTGCTGTCTAACATGGATGAGCCCCTTGGTCACACTTTAAAAAGAACGGAGATTGCTGATGGATTCATCTTGGAGAAATCATCATCTCCATTAGGCGTTGTATTGATTATTTTTGAGTCACGACCTGATGCACTTGTACAGATAGCTTCTCTAGCAGTCCGAAGTGGGAACGGCCTCATGTTGAAAGGAGGAAAGGAGGCCAAAAGATCAAACGCCATCTTACACAAGGTGATTACCTCGGCAATTCCTGTAAGTGTAGGTGAAAGACTTATTGGACTAGTGACTTCTAGAGAAGAGATCCCTGAATTACTTAAGCTTGACGATGTGATTGATCTTGTTATCCCAAGAGGTAGCAATAAACTTGTTTCTCAAATCAAGGCATCAACAAAAATTCCTGTTCTAGGCCATGCTGATGGAATTTGCCATGTTTATGTTGACAAGTCTGCTGACATGGATATGGCTAAGCGCATTACTGTTGATGCAAAAATCGATTATCCTGCAGCCTGCAATGCGATGGAAACACTTCTTGTGCATAAGGATTTGGCACAAAATGGAGGTCTTAATGATCTGATTGTGGAACTTCAAACAAAAGGGGTTTCTTTATATGGTGGACCCAAAGCTAGCTCCCTGCTCATGATTCCAGAGGCACGTACATTTCGTCACGAATATAGTTCACTAGCTTGCACTGTGGAAGTTGTTGAAGATGTATATGCTGCGATAGATCATATACATCAGCATGGAAGGCATGTTATTGCCCACACCGATAGCATCATTACTGAAGATCAGGAAGTTGCTGAAGTTTTTTTACGTCAGGTTGACAGTGCTGCTGTATTTCACAACGCAAGTACAAGATTTAGTGATGGATTCCGCTTTGGACTTGGTGCAGAGGTGGGCATTAGTACTGGTCGTATTCATGCTCGTGGCCCAGTTGGAGTTGAAGGATTGCTAACAACTAAATGGCTTGCAAGGGGAAGTGGACAAATTGTTGATGGTGATAAATCAATTGTGTATAGTCACAAAGACCTTACTCAGCAAGGGTGATTATCCAGTTGTGTATTTAGGAAGATTTTGTATGGTGCTATTGGTAGGTGGGTTTGGGGCTTACCCAAAGATTTTCTGTATTTTCCAGCCATTGACTTGTGATCATTTGCAGTCTTCACATTATTCTGTATTAACATAGTTATGTTGTTGCATAGGTTTTAACTTGCAGGACTAACTTGTCCCAATTATAATAATATCGAAATATGTATTCCAAATAATTAAAAAAACGTTTCATA
AAACTCATATTAGACTAGAAAAGTGGGTGAAGGAAGTTGACTGCACATTTCTGCTCCTACATTTCTCTTCTTCCCTAGAAATGGAGACAGTTGATTCAACTCGAGCATTTGTGAAGAACGTCAAACGACTCATTGTCAAGGTTGGGACTGCAGTTGTGACTCGAGCTGATGGAAGATTAGCACTTGGAAGATTAGGAGCCCTCTGTGAGCAGCTTCAGGAGCTTAATTCGCAAGGGTATGAAGTTATTTTGGTGACTTCTGGTGCTGTAGGTGTTGGTCGTCAGCGGCTTAGATATAGGAAGTTGCTCAACAGCAGTTTTCTTGATCTTCAAAAGCCACAAACTGAGCTTGATGGCAAGGCTTGTGCTGCTGTGGGCCAGAATGGCCTCATGGCTCTGTATGATTCTTTGTTCAGTCAGTTGGATGTGACATCAGCTCAGCTTCTGGTGACTGATAATGACTTTAGAGATCCAGATTTTAGGAGACAACTCAATGACACAGTAAATTCGTTGCTTTCTCTAAAAGTTATACCTATATTCAATGAGAATGATGCTATCAGTACGCGGAGAGCTCCTTATGAGGACTCTTCTGGAATATTTTGGGATAATGACAGTCTGGCAGCTCTTCTAGCTTTGGAATTAAAAGCTGATCTTCTAGTTCTGTTGAGTGATGTAGACGGTCTTTACAGTGGTCCTCCCCGTGATCCAGATTCAAAGTTGATTTACACATACATTAAGGAAATACATGAGAGAGTGATTACTTTTGGAGACAAGTCCAGGGTGGGAAGAGGAGGCATGACTGCCAAAGTAAAAGCTGCTATGTATGCTGCTTATGCTGGCATTCCTGTTGTCATAACCAGTGGCTTTGCGACAGATAACATCATCAAAGTGCTGCATGGGGAACGTATAGGCACACTCTTTCATTGTGATGCCAATAAATGGGCCTCAATTGGAGAGACTGATGCTCGTGAGATGGCAGTGGCTGCAAGGGCATGTTCCAGACGTCTTCAGGCACTGTCTTCCCAAGAAAGGAGTAAAATATTGCAGGATATAGCTGATGCACTGGAAGCAAATGAAAAGGCAATCCTCGCTGAGAATGAAGCTGATGTGGTTGCTGCTCAACAGGCCGGATATGAGAAGTCTTTGATATCTCGTCTGGCTTTAAATCCAGGAAAAATTTCTAGTCTTGCAAACTCAGTTCGTGTGCTGTCTAACATGGATGAGCCCCTTGGTCACACTTTAAAAAGAACGGAGATTGCTGATGGATTCATCTTGGAGAAATCATCATCTCCATTAGGCGTTGTATTGATTATTTTTGAGTCACGACCTGATGCACTTGTACAGATAGCTTCTCTAGCAGTCCGAAGTGGGAACGGCCTCATGTTGAAAGGAGGAAAGGAGGCCAAAAGATCAAACGCCATCTTACACAAGGTGATTACCTCGGCAATTCCTGTAAGTGTAGGTGAAAGACTTATTGGACTAGTGACTTCTAGAGAAGAGATCCCTGAATTACTTAAGCTTGACGATGTGATTGATCTTGTTATCCCAAGAGGTAGCAATAAACTTGTTTCTCAAATCAAGGCATCAACAAAAATTCCTGTTCTAGGCCATGCTGATGGAATTTGCCATGTTTATGTTGACAAGTCTGCTGACATGGATATGGCTAAGCGCATTACTGTTGATGCAAAAATCGATTATCCTGCAGCCTGCAATGCGATGGAAACACTTCTTGTGCATAAGGATTTGGCACAAAATGGAGGTCTTAATGATCTGATTGTGGAACTTCAAACAAAAGGGGTTTCTTTATATGGTGGACCCAAAGCTAGCTCCCTGCTCATGATTCCAGAGGCACGTACATTTCGTCACGAATATAGTTCACTAGCTTGCACTGTGGAAGTTGTTGAAGATGTATATGCTGCGATAGATCATATACATCAGCATGGAAGGCATGTTATTGCCCACACCGATAGCATCATTACTGAAGATCAGGAAGTTGCTGAAGTTTTTTTACGTCAGGTTGACAGTGCTGCTGTATTTCACAACGCAAGTACAAGATTTAGTGATGGATTCCGCTTTGGACTTGGTGCAGAGGTGGGCATTAGTACTGGTCGTATTCATGCTCGTGGCCCAGTTGGAGTTGAAGGATTGCTAACAACTAAATGGCTTGCAAGGGGAAGTGGACAAATTGTTGATGGTGATAAATCAATTGTGTATAGTCACAAAGACCTTACTCAGCAAGGGTGATTATCCAGTTGTGTATTTAGGAAGATTTTGTATGGTGCTATTGGTAGGTGGGTTTGGGGCTTACCCAAAGATTTTCTGTATTTTCCAGCCATTGACTTGTGATCATTTGCAGTCTTCACATTATTCTGTATTAACATAGTTATGTTGTTGCATAGGTTTTAACTTGCAGGACTAACTTGTCCCAATTATAATAATATCGAAATATGTATTCCAAATAATTAAAAAAACGTTTCATA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc08g043170.2.1 | SL2.50ch08:22886679..22899194 | 721 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc08g043170.2 | SL2.50ch08:22886600..22899430 | 12,831 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc08g043170.2.1.1 | SL2.50ch08:22886600..22886739 | 140 | + | n/a |
| exon | exon:Solyc08g043170.2.1.10 | SL2.50ch08:22893566..22893655 | 90 | + | n/a |
| exon | exon:Solyc08g043170.2.1.11 | SL2.50ch08:22893918..22894004 | 87 | + | n/a |
| exon | exon:Solyc08g043170.2.1.12 | SL2.50ch08:22894139..22894225 | 87 | + | n/a |
| exon | exon:Solyc08g043170.2.1.13 | SL2.50ch08:22894337..22894433 | 97 | + | 2 |
| exon | exon:Solyc08g043170.2.1.14 | SL2.50ch08:22894536..22894639 | 104 | + | n/a |
| exon | exon:Solyc08g043170.2.1.15 | SL2.50ch08:22894744..22894819 | 76 | + | 2 |
| exon | exon:Solyc08g043170.2.1.16 | SL2.50ch08:22896742..22896901 | 160 | + | 1 |
| exon | exon:Solyc08g043170.2.1.17 | SL2.50ch08:22897023..22897091 | 69 | + | 1 |
| exon | exon:Solyc08g043170.2.1.18 | SL2.50ch08:22898209..22898275 | 67 | + | n/a |
| exon | exon:Solyc08g043170.2.1.19 | SL2.50ch08:22898362..22898432 | 71 | + | 1 |
| exon | exon:Solyc08g043170.2.1.2 | SL2.50ch08:22886989..22887060 | 72 | + | n/a |
| exon | exon:Solyc08g043170.2.1.20 | SL2.50ch08:22899113..22899430 | 318 | + | n/a |
| exon | exon:Solyc08g043170.2.1.3 | SL2.50ch08:22887151..22887254 | 104 | + | 1 |
| exon | exon:Solyc08g043170.2.1.4 | SL2.50ch08:22887845..22887947 | 103 | + | n/a |
| exon | exon:Solyc08g043170.2.1.5 | SL2.50ch08:22888076..22888237 | 162 | + | n/a |
| exon | exon:Solyc08g043170.2.1.6 | SL2.50ch08:22888832..22889109 | 278 | + | 1 |
| exon | exon:Solyc08g043170.2.1.7 | SL2.50ch08:22892648..22892798 | 151 | + | n/a |
| exon | exon:Solyc08g043170.2.1.8 | SL2.50ch08:22892877..22893041 | 165 | + | n/a |
| exon | exon:Solyc08g043170.2.1.9 | SL2.50ch08:22893130..22893207 | 78 | + | n/a |
| intron | intron:Solyc08g043170.2.1.10 | SL2.50ch08:22893208..22893565 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.11 | SL2.50ch08:22893656..22893917 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.12 | SL2.50ch08:22894005..22894138 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.13 | SL2.50ch08:22894226..22894336 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.14 | SL2.50ch08:22894434..22894535 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.15 | SL2.50ch08:22894640..22894743 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.16 | SL2.50ch08:22894820..22896741 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.17 | SL2.50ch08:22896902..22897022 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.18 | SL2.50ch08:22897092..22898208 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.19 | SL2.50ch08:22898276..22898361 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.2 | SL2.50ch08:22886740..22886988 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.20 | SL2.50ch08:22898433..22899112 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.3 | SL2.50ch08:22887061..22887150 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.4 | SL2.50ch08:22887255..22887844 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.5 | SL2.50ch08:22887948..22888075 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.6 | SL2.50ch08:22888238..22888831 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.7 | SL2.50ch08:22889110..22892647 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.8 | SL2.50ch08:22892799..22892876 | n/a | + | n/a |
| intron | intron:Solyc08g043170.2.1.9 | SL2.50ch08:22893042..22893129 | n/a | + | n/a |
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