Solanum lycopersicum mRNA Solyc08g021820.2.1

mRNA details  
Name
Solyc08g021820.2.1
Type
mRNA
Length
805
Organism
Solanum lycopersicum
Description
Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
Location(s)
SL2.50ch08:34547997..34549464
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
Length
1468
Nb exon
4
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g021820.2.1 Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein

CCAACTATGAAATTAGTGCTACCCCTTTTCTTTTGATCAACTCATTTAATTAATACAACTTTTGTGATATGGAACTAGAGCTTGGCCTTGCTATTTCAAATTGTAACCATTTTCCCATCAATGCAATCACGAGTTATAGGAAGAATGGTTTTGATGATAGCTTCTCCGATATGAAGATGAAGATGAAGCAAAAGCGATGTTTTGAAGAGGCCTTTCATGAGGATGAAGGAGTAGTTGAACGTAAGACGTTGTCTTTGTTCATATGGAATGGCCAACCAAATGAAGATGATGATAACCATGGAAGAAACAAGAAACCTTTTAATGCCACTTGTCACAAGGATTTTGAGGAAGAAAGTCTCAAACTTCTTGGTTGGCCACCAATTAATACATGGAGAAAAAAACAATTTCATCATCAAGGTCATGCAGGTTGGATTACAAATGATAGAAACAATAACAATAATAATAATAATAATGTTATTGTTGGAGGAAGAAACTCTATGTATGTAAAGGTGAAGATGGAAGGGGTGCCAATAGGAAGGAAGGTTGATCTAAGGCTCTATCATTCTTATCAACTTTTTACCCAAAATTTACTTCAAATGTTTGCAAGATATCAAAATAGTGGAAAAAATAGTACACGCTTTACAATCTTGTACCAAGACAGAGAAGGAGACTGGATGCTTGCTGGAGATGTACCATGGAAAACATTCGTGGAGACTGTTCAAAGAATTGAGATACAAAAGAATGAGAAATGAGGGAATTAGATGCTCTAGAAATCATATGCTTATGGAGTAGCATGGACAAGTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g021820.2.1SL2.50ch08:34548064..34549411228+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g021820.2SL2.50ch08:34547997..345494641,468+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g021820.2.1.1SL2.50ch08:34547997..34548333337+1
exonexon:Solyc08g021820.2.1.2SL2.50ch08:34548565..34548836272+2
exonexon:Solyc08g021820.2.1.3SL2.50ch08:34548928..3454901891+1
exonexon:Solyc08g021820.2.1.4SL2.50ch08:34549360..34549464105+n/a
intronintron:Solyc08g021820.2.1.2SL2.50ch08:34548334..34548564n/a+n/a
intronintron:Solyc08g021820.2.1.3SL2.50ch08:34548837..34548927n/a+n/a
intronintron:Solyc08g021820.2.1.4SL2.50ch08:34549019..34549359n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17897742%2Fdetails feature 17897742
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