Solanum lycopersicum mRNA Solyc08g014120.2.1
 mRNA details
|
| Name | Type |
Length
898
|
Organism |
|
Description
BHLH transcription factor (AHRD V1 **** Q7XJU2_ARATH); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
|
|
Location(s)
SL2.50ch08:3779898..3782384
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005634
- Length
- 2487
- Sifter term
- GO:0030528
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc08g014120.2.1 BHLH transcription factor (AHRD V1 **** Q7XJU2_ARATH); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
TGCCTACTAGTATCCTAATATCCGTACTCTTTTCTTTTATATAGGACTGCTATTACTTGTCAGCGAATTGAAGCAATAGAAGGAAAGATGATGCAACACAAAAGAAGTCCAATTTCCCTCGAGCATAGCAGCAGCCTCACATCTCTTACACCAAAACGACTAAAGGCCGATATGCTCATTTCCTCCAAGGAGAAGAAGGAGAAGTTTGGTGAACGTATAGTTGCTCTTCAACAGCTGGTGTCACCATATGGCAAGACAGATACGGCTTCTGTTCTCCTTGAGGCAATGGGATACATAAAATTCCTCCATGAACAAGTGAAGGTGTTGAGTGCACCATACCTCGGAACTATGCCAATGTCGAAGACACAGGAATCACAACCTTACAATTTGAGAAGCCAAGGCTTATGTCTTGTGCCGGTATCATATACTGTTGGTGTGGCAAGCAGCAATGGTGCTGATATTTGGGCTCCCATTAAGACCTCACAAAAGTTCTAGTCCAGAGAACGATGTGTGATTTCACCATCACTAACGTCCATGGTAAGGTCTTCGATTTACAATAACACAACCAGTGTTTCAAAAAAAGCAGCCGAAAGGATGCATTTTTCAACATGGAGATGCAGGTATGTGATGATTCTCCTGGCAAGGTCCACTTGATTTTTTGTGGTTCAAACGTCTAAGGAGAACGTAGAGCTTGTTGTTCTGATAAATGCTAGTAGCCAGATCTAATTTGAGGGCTAATATATAAAGATAGCCTGAGTTATGTCTAGGTTTTTAACAGAAATGTATATTTAAGAAAGAAATATTATGTAGTGATCTTTGATGCAAATGTATCAAAGATGGACTTGTATTAAATATGAGAAGCAATGGAAGCTCTGGAATAACTTGTTTGATTCAGAAA
TGCCTACTAGTATCCTAATATCCGTACTCTTTTCTTTTATATAGGACTGCTATTACTTGTCAGCGAATTGAAGCAATAGAAGGAAAGATGATGCAACACAAAAGAAGTCCAATTTCCCTCGAGCATAGCAGCAGCCTCACATCTCTTACACCAAAACGACTAAAGGCCGATATGCTCATTTCCTCCAAGGAGAAGAAGGAGAAGTTTGGTGAACGTATAGTTGCTCTTCAACAGCTGGTGTCACCATATGGCAAGACAGATACGGCTTCTGTTCTCCTTGAGGCAATGGGATACATAAAATTCCTCCATGAACAAGTGAAGGTGTTGAGTGCACCATACCTCGGAACTATGCCAATGTCGAAGACACAGGAATCACAACCTTACAATTTGAGAAGCCAAGGCTTATGTCTTGTGCCGGTATCATATACTGTTGGTGTGGCAAGCAGCAATGGTGCTGATATTTGGGCTCCCATTAAGACCTCACAAAAGTTCTAGTCCAGAGAACGATGTGTGATTTCACCATCACTAACGTCCATGGTAAGGTCTTCGATTTACAATAACACAACCAGTGTTTCAAAAAAAGCAGCCGAAAGGATGCATTTTTCAACATGGAGATGCAGGTATGTGATGATTCTCCTGGCAAGGTCCACTTGATTTTTTGTGGTTCAAACGTCTAAGGAGAACGTAGAGCTTGTTGTTCTGATAAATGCTAGTAGCCAGATCTAATTTGAGGGCTAATATATAAAGATAGCCTGAGTTATGTCTAGGTTTTTAACAGAAATGTATATTTAAGAAAGAAATATTATGTAGTGATCTTTGATGCAAATGTATCAAAGATGGACTTGTATTAAATATGAGAAGCAATGGAAGCTCTGGAATAACTTGTTTGATTCAGAAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc08g014120.2.1 | SL2.50ch08:3779987..3781981 | 135 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc08g014120.2 | SL2.50ch08:3779898..3782384 | 2,487 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc08g014120.2.1.1 | SL2.50ch08:3779898..3780086 | 189 | + | n/a |
| exon | exon:Solyc08g014120.2.1.2 | SL2.50ch08:3780540..3780605 | 66 | + | n/a |
| exon | exon:Solyc08g014120.2.1.3 | SL2.50ch08:3780843..3780908 | 66 | + | n/a |
| exon | exon:Solyc08g014120.2.1.4 | SL2.50ch08:3781599..3781646 | 48 | + | n/a |
| exon | exon:Solyc08g014120.2.1.5 | SL2.50ch08:3781856..3782384 | 529 | + | n/a |
| intron | intron:Solyc08g014120.2.1.1 | SL2.50ch08:3780087..3780539 | n/a | + | n/a |
| intron | intron:Solyc08g014120.2.1.2 | SL2.50ch08:3780606..3780842 | n/a | + | n/a |
| intron | intron:Solyc08g014120.2.1.3 | SL2.50ch08:3780909..3781598 | n/a | + | n/a |
| intron | intron:Solyc08g014120.2.1.4 | SL2.50ch08:3781647..3781855 | n/a | + | n/a |
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