Solanum lycopersicum mRNA Solyc08g014120.2.1

mRNA details  
Name
Solyc08g014120.2.1
Type
mRNA
Length
898
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 **** Q7XJU2_ARATH); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch08:3779898..3782384
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
2487
Nb exon
5
Sifter term
GO:0030528
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g014120.2.1 BHLH transcription factor (AHRD V1 **** Q7XJU2_ARATH); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TGCCTACTAGTATCCTAATATCCGTACTCTTTTCTTTTATATAGGACTGCTATTACTTGTCAGCGAATTGAAGCAATAGAAGGAAAGATGATGCAACACAAAAGAAGTCCAATTTCCCTCGAGCATAGCAGCAGCCTCACATCTCTTACACCAAAACGACTAAAGGCCGATATGCTCATTTCCTCCAAGGAGAAGAAGGAGAAGTTTGGTGAACGTATAGTTGCTCTTCAACAGCTGGTGTCACCATATGGCAAGACAGATACGGCTTCTGTTCTCCTTGAGGCAATGGGATACATAAAATTCCTCCATGAACAAGTGAAGGTGTTGAGTGCACCATACCTCGGAACTATGCCAATGTCGAAGACACAGGAATCACAACCTTACAATTTGAGAAGCCAAGGCTTATGTCTTGTGCCGGTATCATATACTGTTGGTGTGGCAAGCAGCAATGGTGCTGATATTTGGGCTCCCATTAAGACCTCACAAAAGTTCTAGTCCAGAGAACGATGTGTGATTTCACCATCACTAACGTCCATGGTAAGGTCTTCGATTTACAATAACACAACCAGTGTTTCAAAAAAAGCAGCCGAAAGGATGCATTTTTCAACATGGAGATGCAGGTATGTGATGATTCTCCTGGCAAGGTCCACTTGATTTTTTGTGGTTCAAACGTCTAAGGAGAACGTAGAGCTTGTTGTTCTGATAAATGCTAGTAGCCAGATCTAATTTGAGGGCTAATATATAAAGATAGCCTGAGTTATGTCTAGGTTTTTAACAGAAATGTATATTTAAGAAAGAAATATTATGTAGTGATCTTTGATGCAAATGTATCAAAGATGGACTTGTATTAAATATGAGAAGCAATGGAAGCTCTGGAATAACTTGTTTGATTCAGAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g014120.2.1SL2.50ch08:3779987..3781981135+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g014120.2SL2.50ch08:3779898..37823842,487+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g014120.2.1.1SL2.50ch08:3779898..3780086189+n/a
exonexon:Solyc08g014120.2.1.2SL2.50ch08:3780540..378060566+n/a
exonexon:Solyc08g014120.2.1.3SL2.50ch08:3780843..378090866+n/a
exonexon:Solyc08g014120.2.1.4SL2.50ch08:3781599..378164648+n/a
exonexon:Solyc08g014120.2.1.5SL2.50ch08:3781856..3782384529+n/a
intronintron:Solyc08g014120.2.1.1SL2.50ch08:3780087..3780539n/a+n/a
intronintron:Solyc08g014120.2.1.2SL2.50ch08:3780606..3780842n/a+n/a
intronintron:Solyc08g014120.2.1.3SL2.50ch08:3780909..3781598n/a+n/a
intronintron:Solyc08g014120.2.1.4SL2.50ch08:3781647..3781855n/a+n/a
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Related viewsNone found
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