Solanum lycopersicum mRNA Solyc08g008380.2.1

mRNA details  
Name
Solyc08g008380.2.1
Type
mRNA
Length
2,174
Organism
Solanum lycopersicum
Description
Auxin response factor 9 (AHRD V1 **** D7R605_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch08:2808202..2812983
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
  • GO:0046983
Length
4782
Nb exon
15
Sifter term
  • GO:0003700
  • GO:0008022
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g008380.2.1 Auxin response factor 9 (AHRD V1 **** D7R605_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

ATGGAGAATCAAGGGTCTTTTATGTCAAACCAGCAGCATCAGCAACACAATTTCTTAGCAGAAGGTGAAGATGAATTGTGCCAAGAGTTATGGAGATTGTGTGCAGGTCCATTAGTTGATGTTCCAAAAAATGAAGAAAGGGTTTACTATTTCCCACAAGGTCATATGGAACAATTGGAGGCATCAACAAATCAGGAGCTGAATCAGAGCATACCATTGTTCAATCTGCAACCAAAGATCCTTTGTCGCGTTCTTCACATTCAACTTCTGGCTGAACAAGACTCTGATGAGGTTTATGCACAGATTGCTTTGTTGCCCGAAGCAGATCAAGTTGAGCCGACTAGTCCTGATCTGTCCCTGCCCGAGCCTCCGAGGCCCAAAGTTCATTTCTTCTGCAAGGTTCTAACTGCGTCTGATACGAGCACTCACGGTGGATTTTCCATTCTCAGAAAACATGCTAACGAATGCCTGCCTCCCCTGGACATGACCCAAGCGACTCCAGCACAGGAATTGGTCGCCAAGGACCTTCATGGCTTCGAGTGGCATTTTAAACATATATTTAGAGGCCAACCCAGGAGGCATTTACTTACCACAGGGTGGAGTACCTTTGTTTCCTCGAAGAGATTAGTTACGGGGGATTCTTTTGTATTCTTGAGGAGTGGAAAAGGTGAAGTCCGAATAGGAATTAGACGACTTGCTCGCCAACCGAGCTCAATGCCACAATCAGTGATTTCAAGTCAGAGCATGCACCTAGGAGTGTTAGCTACTGCATCTCATGCTGTGACGACCCAGACTATGTTTGTCGTTTATTACAAACCGAGAACAAGTCAGTTTATCATAGGTCTAAACAAATATCTCGAGGCTGTTAAGCATCGGTATTCAGTTGGCATGAGATTCAAGATGAAATTTGAAGGGGAAGAGATTCCTGAGAAAAGATTTACAGGTACCATAGTAGGAGTTGAAGATAGTTCCTCACAGTGGAAAGATTCAAAATGGCGATCATTGAAGGTTCAATGGGATGAGCCTGCGTCTGTTCCAAGACCTGACAGAGTTTCTCCTTGGGACATCGAACCATTTGTGGCATCAGTCGCTACTCCTCTCGTTCCACCAATGGGGGTGAAGAATAAAAGGCATCGAGCACATAACGAACCCAAATCTTCAGAACCTGTTCCTGCTGCTGCACTAGCCGCTTGGATTCCCTCAGCGCAATTTAACCCCGTTATTGAAGGACAAAGTAGTGATAATCCATTTTCCTTGCATACTTCACAAACAAATTCAACTGCCACAAACAGTACTTTTAAGGCTCGTGTCGATGGAATTTGGTCAGCTTCTAAAGTAAACGCTTCTTTGAATATGCTTTTGGATGAGACAGAAGCCAGTAAAAGTGCTTCACCTCGGCCTGCTTTTCCAAGCTTTGCGTCCTCACAATTCGGAAAGCAGAACGATCTCCTGCTTCCTAGTCTAGATGATGAGAGAAAATGTGGTACAATTACATCCTGTAGATTGTTTGGTATTGACTTGAAATGTCCCTCATTTGGTTCTGTTAATGAGAATCCGCCTCTAGAACCAGCCAACAATTCTGATGGCTCTGCTGAAGGGTGCTCTGGAAACTTGACTTCTGCTGGTGATTCAGAAGACAACTCTGGCCTTTCAAGAGATTCTGAAGATCAGAAGCAAGAGCAGCTGAATCCACCACCAAAGGAGGTTCACATCAAGCAGGTTTCTTCCACCAGAACTCGCACCAAGGTTCAAATGCAAGGGGTGGCTGTGGGACGTGCTGTGGATTTAACAAAACTGAATGGATATGATGAGCTCCTAAGAGAACTCGAAGAGTTGTTCGATATCCAGGAAGAGCTCCACGCACGAAATAAATGGGAGATCGTTTTTACAGATGATGAAGGTGACATGATGCTTATGGGCGATTATCCTTGGTCAGAGTTCTGCAACATCGCGAAGAGGATCTTCATTTGTTCTAGTCAAGACATGAAAAGTTTCAGTGCAGGAACCAAATCGCCGTCTTGTTTAGAAAGTGAGACAACTGCTTCAACATGAAAATTTGGAAGAGAATAAAGGTATCTGCAATCTTCAATAATAACGCGTAGAGGATGAGACTATGTCGTCTTGTTGAATAAGCTTGATAACAAGCAAATAGTTGAATCTTTTTTCATCATTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g008380.2.1SL2.50ch08:2808201..2812729684+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g008380.2SL2.50ch08:2808202..28129834,782+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g008380.2.1.1SL2.50ch08:2808202..280826564+n/a
exonexon:Solyc08g008380.2.1.10SL2.50ch08:2811039..281111173+1
exonexon:Solyc08g008380.2.1.11SL2.50ch08:2811201..2811354154+n/a
exonexon:Solyc08g008380.2.1.12SL2.50ch08:2811466..2812049584+2
exonexon:Solyc08g008380.2.1.13SL2.50ch08:2812161..2812348188+n/a
exonexon:Solyc08g008380.2.1.14SL2.50ch08:2812612..2812749138+1
exonexon:Solyc08g008380.2.1.15SL2.50ch08:2812882..2812983102+n/a
exonexon:Solyc08g008380.2.1.2SL2.50ch08:2808381..2808490110+2
exonexon:Solyc08g008380.2.1.3SL2.50ch08:2809131..280922696+n/a
exonexon:Solyc08g008380.2.1.4SL2.50ch08:2809493..280954957+n/a
exonexon:Solyc08g008380.2.1.5SL2.50ch08:2809660..2809812153+n/a
exonexon:Solyc08g008380.2.1.6SL2.50ch08:2809908..280999285+n/a
exonexon:Solyc08g008380.2.1.7SL2.50ch08:2810112..281020291+2
exonexon:Solyc08g008380.2.1.8SL2.50ch08:2810305..2810469165+1
exonexon:Solyc08g008380.2.1.9SL2.50ch08:2810796..2810909114+1
intronintron:Solyc08g008380.2.1.1SL2.50ch08:2808266..2808380n/a+n/a
intronintron:Solyc08g008380.2.1.10SL2.50ch08:2811112..2811200n/a+n/a
intronintron:Solyc08g008380.2.1.11SL2.50ch08:2811355..2811465n/a+n/a
intronintron:Solyc08g008380.2.1.12SL2.50ch08:2812050..2812160n/a+n/a
intronintron:Solyc08g008380.2.1.13SL2.50ch08:2812349..2812611n/a+n/a
intronintron:Solyc08g008380.2.1.14SL2.50ch08:2812750..2812881n/a+n/a
intronintron:Solyc08g008380.2.1.2SL2.50ch08:2808491..2809130n/a+n/a
intronintron:Solyc08g008380.2.1.3SL2.50ch08:2809227..2809492n/a+n/a
intronintron:Solyc08g008380.2.1.4SL2.50ch08:2809550..2809659n/a+n/a
intronintron:Solyc08g008380.2.1.5SL2.50ch08:2809813..2809907n/a+n/a
intronintron:Solyc08g008380.2.1.6SL2.50ch08:2809993..2810111n/a+n/a
intronintron:Solyc08g008380.2.1.7SL2.50ch08:2810203..2810304n/a+n/a
intronintron:Solyc08g008380.2.1.8SL2.50ch08:2810470..2810795n/a+n/a
intronintron:Solyc08g008380.2.1.9SL2.50ch08:2810910..2811038n/a+n/a
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Related viewsNone found
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