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Solanum lycopersicum mRNA Solyc07g064520.2.1

mRNA details  
Name
Solyc07g064520.2.1
Type
mRNA
Length
2,470
Organism
Solanum lycopersicum
Description
Atp-dependent RNA helicase (AHRD V1 *-** B8BY61_THAPS); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch07:66625866..66630484
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
4619
Nb exon
8
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g064520.2.1 Atp-dependent RNA helicase (AHRD V1 *-** B8BY61_THAPS); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

CGCCGTCATCTCCGGTTCTCCTTTAATTCTCGCCGGCCGTTCATATTTTGCTCACCGGCGGGACACTTCCATCAATAAGCGATTGCAAAAGGTATGGGAAAGCATGCACCTAAGTCACGGAAAGTTAAAATACAGAATCGGTTATCAGAGGTTCATGAAATTGAGCTTCTGGAGGAATGGATAGAATCAGGTAAACCGGAATCCGGTTCAAATCCGTTGTCGCTTGAGCCATTACCACATAAAGCTCCGGTTGGACGTCTTCCGGATGGTTCATTCTCTAGGTATGCTGGTTGTGATAGGTTCAGTCAGTTGCCGGTTTCTAAGAAAACTAAAGATGGGTTAACTCAGTGCAAATACAAAACTATGACCGATATTCAAAGGGCTTCTCTGCCACACTCTCTTTGCGGCCGTGATATTCTTGGTGCGGCGAAAACTGGTTCTGGAAAGACTTTGGCTTTTGTTATTCCGGTGCTAGAGAAATTGTATAAAGCTCGATGGGGACCAGAGGACGGTGTTGGATGCATCATAATGTCTCCCACAAGGGAGTTAGCAGGTCAACTTTTTGAAGTACTTAAATCTGTTGGGAAACATCAAGGCTTCAGTGCTGGCCTTCTGATTGGTGGCCGCAAAGATGTTGATGCTGAAAAAGAACATGTTAATGGATTGAACATCCTGGTCTGTACTCCTGGTCGGCTTCTTCAGCATATGGATGAGACACCAAATTTTGATTGTTCACAACTTCAGGTTTTAGTTCTTGATGAAGCAGATCGTATTCTTGATGTGGGGTTTAAGAGGGATCTAAATGCAATCATTTCACAATTGCCTAAGCATAGGCAGACCTTATTGTTTTCAGCAACCCAGACCAAGTCTGTCCAAGATCTGGCAAGGCTCAGCCTGAAAGACCCTGAATATTTGGGTGTACACGAGGAGTCCGATACTGCGACTCCCAACCGCTTACAACAAACAGCAATGCTTGTTCCTCTTGATAAGAAATTTGACATGTTGTGGAGTTTTATAAAGGCACATCTTAACTCAAGGATATTGGTTTTCCTGTCAAGCTGCAAGCAGGTAAAATTTGTTTTTGAAACTTTCAAAAAACTCCGTCCTGGGATTCCCCTCAAGTGTCTTCATGGAAGGATGAAGCAAGATAGAAGGATGAGAATTTATTCCCAATTTTGTGAACAACGTTCTGTTCTGTTCTCCACTGATGTTGCTTCGAGGGGACTTGATTTTAATAAGGCGGTTGATTGGGTTGTCCAGGTGGATTGTCCTGAAGATTGTGCTTCTTACATACACAGAGTTGGCCGCACTGCTCGTTACCTTTCAGGCGGAAGATCTGTTTTATTCGTGATGCCATCTGAAATGAAGATGCTTGAAAAGTTGGAAGAGAAAAAGATTCCCCTTCGAGTTATCAAGGCAAATGAAAAGAGGATACAGTCTGTCTCGGGTATACTTGCTTCTTTATTGGTCAAGTACCCTGATCTACAACATCTGGCTCAAAGGGCTTTCATAACATATTTGAAGTCCATACACAAACAGAGAGATAAGGAGATTTTTGATGTTACAAAACTTCCTATTGATGAATTCTCTGCTTCATTGGGTCTTCCTATGACCCCAAAGATCCGATTTCTGAAACAGAAACTCAAAGGGAAGACAGTGTCTGAAGCATTATCTCTCATACCAGAGAACACAAGCGATGATAATTTGTTGGAATTTCCAATTAAGGATCCAGAATTTCCTATTAAGGATCCAGATGCAGGCAAATCAGATATAGAGGAAGTGGATGAAGACATCTTTCTAGCTAAGGAGACACAAGAACGCGGAGAAAATATTAACAGCAAAGGAGATGATATGCTGGCCACTAGAATTACGAAGAAAAAGAAACTAAAGATCAATGTCCACAGACCAGTAGGGACAAGGGTTGTGTTTGATGAGGAAGGGAACACCTTACCTCCTCTTGCAAGATTAGCAGCCTCAAGCAGCGGTGCAGACTCTGTTCAACTCAACAAAGAAAAAGTAAATCAGAGATATGCTGAGTTAAGAAAGAACCTGAAGATGGCTGACAAAGAAGACAAGGATTTGGACCGCAAACGTCGCAAAGAAAAACGAATCAGGGAGAAGATGAAGAATAAGAGAGGGAGAGAGGAAGAAGAGGAGGAAGATGAAGAACTCTCTGGGTCAGACATGGAAATCCCCAGAGGTAGAGTCGACAAGAAAACAAAGATATATTTCGACAGTGACGACGAGGATGACAAGAGGAAAGGGAACATGGCTAAAGATGGTATTGCTGCTGATGCTATATCTTTGGCAGAGCAAGAAGAACTGGCTCTGAAGTTGCTAAATTCCATGCACTCATAATGGAACTAACATTTTTGGTAGCTGTAATTTATATTATTCACACTTCTCAGCATCAATGCTGTTATTATAGTACCTCGAATAGATAGAAATTATTGGGTCACTTTCTCACTCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g064520.2.1SL2.50ch07:66625977..66630391755-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g064520.2SL2.50ch07:66625866..666304844,619-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g064520.2.1.1SL2.50ch07:66630017..66630484468-n/a
exonexon:Solyc07g064520.2.1.2SL2.50ch07:66629340..66629615276-n/a
exonexon:Solyc07g064520.2.1.3SL2.50ch07:66628513..66628836324-n/a
exonexon:Solyc07g064520.2.1.4SL2.50ch07:66628029..66628220192-n/a
exonexon:Solyc07g064520.2.1.5SL2.50ch07:66627741..66627896156-n/a
exonexon:Solyc07g064520.2.1.6SL2.50ch07:66627189..66627625437-1
exonexon:Solyc07g064520.2.1.7SL2.50ch07:66626718..66626881164-2
exonexon:Solyc07g064520.2.1.8SL2.50ch07:66625866..66626318453-n/a
intronintron:Solyc07g064520.2.1.2SL2.50ch07:66629616..66630016n/a-n/a
intronintron:Solyc07g064520.2.1.3SL2.50ch07:66628837..66629339n/a-n/a
intronintron:Solyc07g064520.2.1.4SL2.50ch07:66628221..66628512n/a-n/a
intronintron:Solyc07g064520.2.1.5SL2.50ch07:66627897..66628028n/a-n/a
intronintron:Solyc07g064520.2.1.6SL2.50ch07:66627626..66627740n/a-n/a
intronintron:Solyc07g064520.2.1.7SL2.50ch07:66626882..66627188n/a-n/a
intronintron:Solyc07g064520.2.1.8SL2.50ch07:66626319..66626717n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17888909%2Fdetails feature 17888909
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