Solanum lycopersicum mRNA Solyc07g062540.2.1

mRNA details  
Name
Solyc07g062540.2.1
Type
mRNA
Length
2,094
Organism
Solanum lycopersicum
Description
Alpha-1 2-mannosyltransferase (AHRD V1 **-* C5G7Q7_AJEDR); contains Interpro domain(s) IPR005599 Alg9-like mannosyltransferase
Location(s)
SL2.50ch07:65234287..65239273
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0031227
Length
4987
Nb exon
10
Sifter term
  • GO:0004169
  • GO:0005529
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g062540.2.1 Alpha-1 2-mannosyltransferase (AHRD V1 **-* C5G7Q7_AJEDR); contains Interpro domain(s) IPR005599 Alg9-like mannosyltransferase

GTAGAGAAGAAAATACAAAATTGAAACACAGAAGAAAAAGGGAAGCTAAGCAGTGAAATAGCTATGGCGACGAGGCAGAGACGAGCTTTGACGTCGGATCCTCCGGAGACGGCGTCATCTCCGGCGTATACAAAGGTGGATAAGCCGGAGAGATCGGACGGTGAAAATGAAGGCGTCGATAGAGGACTAGGTTGGCTTCTGCCGTTGCTTTGCCTAGGGATGTTGAGGCACATGAGCGCTACGTCAAATATTATTCACGATTGTGACGAGGTGTTCAATTACTGGGAGCCTCTTCACTACTTGCTTTACAAGTCTGGTTTCCAAACTTGGGAATACAGTTCGCAGTTTGCCTTGCGGTCGTATCTGTATATTCTGCTTCACAAACTGGTGGGTTGGCCTGCTGCTTGGTGGTTTGGAGAGGAAAAGGTGAAAGTATTTTATGCTGTGAGAATTTTTCTTGCAGGGCTGTCTGTCATCAGTGATGCTGCTCTAGTTGTAGCCCTTTCCCGTAAATATGGAAAGCGTCTTGCATCATATGCACTCGCAATGCTATGCTTAGCAAGTGGTTGTTTCTTTGCCAGCACGAGTTTCCTTCCGAGTTCATTCTCAATGTATGCCATGTCTCTTTCTTCAGCACTATTTCTATTTAATAAGCCTGCCATGGCAGTTTCTGTTGCTGCCACTGGAGTGATTCTGGGCTGGCCGTTTTCGATCCTTGCTTTTCTTCCACTGACAATTTACTCACTGGTTAAAAGCTTCAAACCTGTGTTTCTTACAGGTGTTGTCACTTCTATCGTCCTTATGGTACTCTCAGTTCTTGTTGACTACGACTACTATAAGAAGTGGACATCCTCTGTTATCAACTTGCTGGTGTACAATGTTTTAGGGGGTGGTGAAAGTCATCTCTATGGTACTGAAGGGGCATCATTTTATTTGAGGAATGGCTTTAACAATTTCAACCTCTGTTTTGTGTTTGCTCTACTGTTCTTAGCAATACTACCCGTTGCTAAGAAGAAGTATGCTCCTGAGTTGCTCATTGTTGTTTCACCTGTCTATCTCTGGATCGCCTTTATGTCCTTACAGCCACACAAAGAAGAAAGATTTCTGTACCCAATATATCCACTTATCTGTGTTGCTGCTTCTGCTGTGATTGAGAGCTTTCCTGATCTGTTCAGGGATAAGTACAATCCCAACGGTACATCCACTCTAGTTAAGATAGCGAAAATTCTCAGACCTCTAGCTCTTGGTTTGATTCTTTGTGTCTCCCATGCTCGGACATTTTCACTTATTAATGGTTATTCAGCTCCTATTGAGATATACAAGCATTTGGACTACCATGATGACGCTGGACCAGGTTCTGTCCTTTGCGTTGGTAGTGAGTGGCACCGGTTCCCTTCTTCCTTCTTCATTCCTGATTATGTGAGCCAAGTTCGATGGCTGGATGATGGATTCACAGGCCTTCTCCCAATCCCGTTCAATTCTAGCTTGGGTGGGACCTCGGCGGCACCATCTTACTTCAATAATAAGAACAAGGCATCAGAGAGGCAATATCTTAAGGATCCTGAGCAATGCACATTGCTGATAGAGCTGCAACTTCAACGTCCTTATCCTACGCGAGGGAGTGACATGTCTACATGGGAGATTGTTGCAGCACTTCCATACCTGGACAGGGAACTATCACCTCCATTGCATCGATCATTCTTTATTCCAAATCAATGGCAGCAGAAGAATGTCTTTGGCCAGTACAGATTACTCAGGAGAATACAAAAGTGATCGCAGATGTACACGCTGAATTTTCTGTTGTCCAGCAGCTTTTAACTCTCTCGGTATAGTACTACGCTAATGTCGACTAGTTTAGTTTTTGTAGTCTGAAACTGCCTACACTTTCGAGGGTAGCAAGTTGAATTAAGTTAAGTTATTGGATCTTCCATTAATTTTGGAAGTCAGATTTTGCATTACATTTTTGTTGGTGTAGATTACACAGATGGGTGTTTAAATTTTGATTAGGAAGCAAATAGTCGAAGTCTCTTATTGGCATTGTTGAAAATGTATCAGTTTAATTTGGTTCCAGTTACTATATATGCTCAAAGTTGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g062540.2.1SL2.50ch07:65234349..65238952570+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g062540.2SL2.50ch07:65234287..652392734,987+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g062540.2.1.1SL2.50ch07:65234287..65234624338+n/a
exonexon:Solyc07g062540.2.1.10SL2.50ch07:65238821..65239273453+n/a
exonexon:Solyc07g062540.2.1.2SL2.50ch07:65235256..6523534388+n/a
exonexon:Solyc07g062540.2.1.3SL2.50ch07:65235468..65235627160+1
exonexon:Solyc07g062540.2.1.4SL2.50ch07:65235899..65236116218+n/a
exonexon:Solyc07g062540.2.1.5SL2.50ch07:65236438..65236733296+2
exonexon:Solyc07g062540.2.1.6SL2.50ch07:65237249..65237363115+n/a
exonexon:Solyc07g062540.2.1.7SL2.50ch07:65237442..65237580139+1
exonexon:Solyc07g062540.2.1.8SL2.50ch07:65238340..65238536197+n/a
exonexon:Solyc07g062540.2.1.9SL2.50ch07:65238649..6523873890+2
intronintron:Solyc07g062540.2.1.1SL2.50ch07:65234625..65235255n/a+n/a
intronintron:Solyc07g062540.2.1.2SL2.50ch07:65235344..65235467n/a+n/a
intronintron:Solyc07g062540.2.1.3SL2.50ch07:65235628..65235898n/a+n/a
intronintron:Solyc07g062540.2.1.4SL2.50ch07:65236117..65236437n/a+n/a
intronintron:Solyc07g062540.2.1.5SL2.50ch07:65236734..65237248n/a+n/a
intronintron:Solyc07g062540.2.1.6SL2.50ch07:65237364..65237441n/a+n/a
intronintron:Solyc07g062540.2.1.7SL2.50ch07:65237581..65238339n/a+n/a
intronintron:Solyc07g062540.2.1.8SL2.50ch07:65238537..65238648n/a+n/a
intronintron:Solyc07g062540.2.1.9SL2.50ch07:65238739..65238820n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17886638%2Fdetails feature 17886638
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