Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Solanum lycopersicum mRNA Solyc07g062080.2.1

mRNA details  
Name
Solyc07g062080.2.1
Type
mRNA
Length
2,050
Organism
Solanum lycopersicum
Description
Mitogen-activated protein kinase 18 (AHRD V1 **** D7KKI7_ARALY); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch07:64906387..64911463
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006468
Length
5077
Nb exon
10
Sifter term
GO:0016908
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g062080.2.1 Mitogen-activated protein kinase 18 (AHRD V1 **** D7KKI7_ARALY); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

ATGCAGCAAGATCAGCGCAAGAAGAGTTCCAAAGAAGTGGAGTTCTTCACCGAGTACGGTGATGCTAATAGGTATAAAATTTTGGAAGTTATAGGCAAGGGAAGTTATGGAGTAGTTTGTGCTGCAATTGACACTCATACAGGAGAGAAAGTGGCTATAAAGAAAATAACTGATATTTTTGAGCACATCTCTGATGCAATTCGAATTCTGCGTGAAGTCAAATTGCTTAGACTTCTAAGGCATCCTGATATTGTTGAAATTAAGCGAATCATCTTACCACCTTCAAGACGAGAGTTCAGAGATATTTATGTTGTTTTTGAGCTTATGGAGTCTGATCTTCACCATGTTATTAAGGCCAATGATGACTTGACACATGAGCACCACCGTTTTTTCTTGTATCAGATGCTGCGTGCAATGAAGTTCATGCACACAGCTAATGTCTACCATCGAGATCTTAAGCCAAAAAATATATTGGCAAATGCAAATTGTAAACTCAAAATATGTGATTTTGGATTGGCAAGGGTTGCATTTAGTGATACACCAACCACAATATTCTGGACGGATTATGTTGCTACAAGGTGGTACCGTGCACCAGAACTATGTGGGTCTTTCTTCTCTAAGTATACACCTGCTATTGATATCTGGAGCATCGGGTGCATTTTTGCGGAGGTTTTGACGGGGAAACCATTATTTCCGGGCAAAAGTGTTGTTCACCAGTTGGATTTGATTACTGATCTTCTGGGGACGCCATCAGTTGATATTGTATCTGGGGTTCGTAATGAAAAGGCAAGGAAGTACTTGACAGATATGAAGAAAAAAAGCCCAGTTCCTTTTACTGAGAAATTTCGAAAAGCAGATCCTTTGGCACTTCGACTGTTGCAGAGGTTGTTAGCATTTGATCCAAAGGATCGCCCAACTGCTGAAGAGGCTTTGGCTGATCCGTACTTCAAGGGACTGGCCAAGATTGAGAGGGAACCTTCTAGTCAACCAATCTCGAAGCTGGAGTTTGAGTTTGAGCGACGAAGGGTCACAAAGGATGACATTCGTGAACTAATATTTAGGGAGATACTTGAGTATCATCCTCAACTTCTGAAGGACTACATGGCTGGAAATAGTGGTGCAAATTTTATCTATCCTAGTGCCATTGGTAATTTCAGAAGGCAATTTGCTTATCTAGAGGAGAATAGTGGTAAAAGTGGCCCAGTAATACCTCCTGGTCGAAAGCACGTCTCTCTCCCGCGATCTACTGTAAATTCCAGTACCATCCCCCCCAGAACACAGCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAGCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTAGTATTTATGCCCCCTTGTACATATATATATATATAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g062080.2.1SL2.50ch07:64906386..64911216601+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g062080.2SL2.50ch07:64906387..649114635,077+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g062080.2.1.1SL2.50ch07:64906387..6490641024+n/a
exonexon:Solyc07g062080.2.1.10SL2.50ch07:64910798..64911463666+2
exonexon:Solyc07g062080.2.1.2SL2.50ch07:64907412..64907820409+n/a
exonexon:Solyc07g062080.2.1.3SL2.50ch07:64907934..64908061128+2
exonexon:Solyc07g062080.2.1.4SL2.50ch07:64908222..6490828160+n/a
exonexon:Solyc07g062080.2.1.5SL2.50ch07:64909008..64909157150+n/a
exonexon:Solyc07g062080.2.1.6SL2.50ch07:64909249..64909404156+n/a
exonexon:Solyc07g062080.2.1.7SL2.50ch07:64909527..64909738212+n/a
exonexon:Solyc07g062080.2.1.8SL2.50ch07:64909839..64909940102+1
exonexon:Solyc07g062080.2.1.9SL2.50ch07:64910268..64910410143+1
intronintron:Solyc07g062080.2.1.1SL2.50ch07:64906411..64907411n/a+n/a
intronintron:Solyc07g062080.2.1.2SL2.50ch07:64907821..64907933n/a+n/a
intronintron:Solyc07g062080.2.1.3SL2.50ch07:64908062..64908221n/a+n/a
intronintron:Solyc07g062080.2.1.4SL2.50ch07:64908282..64909007n/a+n/a
intronintron:Solyc07g062080.2.1.5SL2.50ch07:64909158..64909248n/a+n/a
intronintron:Solyc07g062080.2.1.6SL2.50ch07:64909405..64909526n/a+n/a
intronintron:Solyc07g062080.2.1.7SL2.50ch07:64909739..64909838n/a+n/a
intronintron:Solyc07g062080.2.1.8SL2.50ch07:64909941..64910267n/a+n/a
intronintron:Solyc07g062080.2.1.9SL2.50ch07:64910411..64910797n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17886172%2Fdetails feature 17886172
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)