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Solanum lycopersicum mRNA Solyc07g056350.2.1

mRNA details  
Name
Solyc07g056350.2.1
Type
mRNA
Length
2,424
Organism
Solanum lycopersicum
Description
Mitogen activated protein kinase 20-1 (AHRD V1 **** B3GCL1_ORYSI); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch07:64225895..64231684
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006468
Length
5790
Nb exon
10
Sifter term
GO:0008339
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g056350.2.1 Mitogen activated protein kinase 20-1 (AHRD V1 **** B3GCL1_ORYSI); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

TGAATTTTGAGATTTAGGGTTTTGTTTTTTGGAGGTATTTTTGTGGAAATGTTGAACCCATTTCTATGATTCTTGTTGAGGGAGAGTTTATGAAGGATCAGGATAACGTGATAATAATAATACCAGTTTTGGACAATTTGAAGAGGATTAGGTGGGACTGGGACTGTTCTTTCGCCATCCGTAGCAGAGGACGTTGGGGTAAATGCGGCTGAATTTCTGAATTCAACACTCTTGTCTACTTGGATCACTCGATTCGGATTTATACTTGGATTTGTGGGGTTTCTCGAATTATTTAGAAAAATGCAGCCTGATCACCGAAAGAAAAGTTCAGCAGAGATGGACTTCTTCTCTGAATATGGTGATGCAAATAGATACAAAATTCAAGAAGTCATAGGGAAAGGAAGCTATGGTGTCGTTTGCTCAGCCATTGACACGCACACTGGTGAAAAAGTCGCAATTAAAAAAATTCATGACATCTTTGAACATATATCTGATGCGGCACGGATCCTCCGGGAGATAAAGCTTTTGCGACTTCTGCGCCATCCTGATATAGTTGAAATCAAGCATATTATGTTGCCACCTTCGAGGAGGGATTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCAGATCTACACCAAGTTATCAAGGCTAATGATGACTTGACTCGGGAACATTATCAGTTTTTCCTTTATCAGTTGCTTCGTGCCTTAAAATATATACACACAGCTAATGTCTACCATAGAGATTTAAAGCCGAAAAATATCTTGGCAAATGCAAATTGCAAGCTCAAGATCTGTGATTTTGGATTGGCCAGAGTTGCATTCAATGATACACCTACCACAATATTTTGGACGGATTATGTAGCTACTAGATGGTATAGAGCTCCAGAGTTATGCGGTTCATTTTACTCCAAGTATACCCCTGCAATTGATATATGGAGCATAGGCTGTATCTTTGCTGAGGTTCTTACGGGGAAGCCGCTCTTTCCTGGAAAAAATGTAGTTCACCAACTGGATTTAATGACTGATCTGCTTGGAACGCCTTCAATGGATACAATTTCTCGTGTGCGTAATGACAAGGCTAGGAGATACCTAACTAGCATGAGAAAGAAGCAGCCTGTTTCTTTTGCTCAGAAATTTCCAAATGCTGATCCTTTGTCCCTTAAACTTCTTGAAAGATTACTTGCTTTTGACCCCAAGGACCGACCCACTGCTGAGGAGGCACTAGCTGATCCTTATTTTAAGGGTCTGGCTAAATCTGAAAGGGAACCATCATGCAAGTCAATTTCAAAAATGGAGTTCGAATTTGAGAGGCGAAGAGTGACGAAGGAGGATCTCAGGGAATTAATATTCCGGGAGATACTAGAATATCATCCTCAGCTGAGGAAGGATTACTTGAATGGTGTAGAAAGGACTAATTTTCTGTATCCGAGTGCTGTTGATCAATTCAGGAAACAGTTCGCTCACTTGGAAGAGAACGGTGGTAATGGCGTTCCAGTGGTTCCGATGGACAGGAAGCATGTCTCTCTTCCAAGGTCTACAGTTGTACATTCAAATCCAAACCCTTTGAAAGAACAGCCTATTGTTGCCAATATGAGAGACCGACAAAATGGTGAAGAGTCTTGCAGTAGAAACTGCAGAGATTCTGAAGGCCTTGCAAGTAGTCTAACAAGAACCCTACAGGCTCAGCCAAGAAATGCTTTAGCAGCCAAACCAGGAAAAGTTGTTGGTCCCGGTTTGGCTTATGATTCGGGAAATAGAGAAAAATATGATCCTAGGTCTCAAGTCAGGAATGCAGTAGGCCCCCCTCAGATTATGTCTTCAGTTTACAGCTACGACAGAAGTGGGGTGGTGAAACAAGAAAGGTCTGTTGAGACAGAGAGGGATATGAATTGTCATTCAAAGCCAATGGCACCATGTGGAATGGCTGCTAAGTTAGCCCCAGATATTGCTATAAATATTGATAGCAACCCATTCTATATGATGCGAGCTGGAGTTACAAAACCAGATCGTGTTGATGACCGAATCACCATAGACACAAACTTATTGCAGGCTAAATCCCAATATGGTGGAATTGGAGTTGCGGCGGCAGCAGCTACTAGTGGTGCAGCTCATAGGAAAGTAGGGACTGTTCAGTATGGTATGTCCAGGATGTACTAGAAAATACACCTCCAAAGTGGTGAAATTATGAATACATACATGTTGGGTGGGGTTGGAGAAAGTCCATCTCAGGAATGGTGGCAGAAACTCTTTGGACAAAAGGGTATGGTGGGTTGTACAGGCAGGAGAATCTGCAGGGGATCTAGTCCTATTTCCTAATTGTCAGTTTTTCCTAGTTGTTATCACATGAAGACTATATCATATTTTCATCATGAAATTCATTTTAGTGATGGTAATGTCCCCTCCCCTTCTCCGCAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g056350.2.1SL2.50ch07:64226194..64231426622+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g056350.2SL2.50ch07:64225895..642316845,790+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g056350.2.1.1SL2.50ch07:64225895..64226218324+n/a
exonexon:Solyc07g056350.2.1.10SL2.50ch07:64230972..64231684713+1
exonexon:Solyc07g056350.2.1.2SL2.50ch07:64227262..64227670409+n/a
exonexon:Solyc07g056350.2.1.3SL2.50ch07:64227890..64228017128+n/a
exonexon:Solyc07g056350.2.1.4SL2.50ch07:64228159..6422821860+2
exonexon:Solyc07g056350.2.1.5SL2.50ch07:64229145..64229294150+n/a
exonexon:Solyc07g056350.2.1.6SL2.50ch07:64229381..64229536156+n/a
exonexon:Solyc07g056350.2.1.7SL2.50ch07:64229649..64229860212+n/a
exonexon:Solyc07g056350.2.1.8SL2.50ch07:64229944..64230045102+n/a
exonexon:Solyc07g056350.2.1.9SL2.50ch07:64230698..64230867170+1
intronintron:Solyc07g056350.2.1.1SL2.50ch07:64226219..64227261n/a+n/a
intronintron:Solyc07g056350.2.1.2SL2.50ch07:64227671..64227889n/a+n/a
intronintron:Solyc07g056350.2.1.3SL2.50ch07:64228018..64228158n/a+n/a
intronintron:Solyc07g056350.2.1.4SL2.50ch07:64228219..64229144n/a+n/a
intronintron:Solyc07g056350.2.1.5SL2.50ch07:64229295..64229380n/a+n/a
intronintron:Solyc07g056350.2.1.6SL2.50ch07:64229537..64229648n/a+n/a
intronintron:Solyc07g056350.2.1.7SL2.50ch07:64229861..64229943n/a+n/a
intronintron:Solyc07g056350.2.1.8SL2.50ch07:64230046..64230697n/a+n/a
intronintron:Solyc07g056350.2.1.9SL2.50ch07:64230868..64230971n/a+n/a
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Related viewsNone found
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