Sol Genomics Network

Solanum lycopersicum gene Solyc07g056150.2

Name Solyc07g056150.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc07g056150	Length 4,292

Description

Ras-related protein Rab-2-A (AHRD V1 ***- B6T1U8_MAIZE); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type

Location(s)

SL2.50ch07:63994885..63999176

GFF source

ITAG_eugene

From BOGAS: 1

Length: 4292

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc07g056150.2.1	SL2.50ch07:63994885..63999176	1,897	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc07g056150.2 SL2.50ch07:63999176..63994885 (sequence from reverse strand)
GATTACCCGACCCGTTTAACAGCTTTGCTGGAGTCGTGCCTTCTCTTCGAAGGAAAATCCTTCGACACGCCAAAATTGGCAAAGTAGTTCAATAATTTACGTATATTCAAACGCCTTTGCGCCTCTGTAAATTCTCCCGTCGTTTCTTCTTTCTCTCTCCGCATCACCGACAGAGAAGAAGAAGAGGAAGGATATACCGATACAGCAATTATTAGGGATTTGTATATTATTTTTTCAGGTAAAATATACATTTACAACTATTGTTTTCTACAGCTCAGACGATATTCAGCCATTACTCTTTCTCCGGAATTTGCTTCTCAAACATGTCTTACGCCTATCTCTTCAAGTATATCATCATCGGCGATACCGGTATATTTTTTTCCTGATTTTTCTGGTTTTATTTGTGTAATTTTATTGTTTAACACCTGATTTGGATCTGATCAATAGGTTCCTGGTGAGTTTGAATTGAACTTAGTTTTTCTTTTCATGAATTTTTAATTATCTCGATCTGGAATAAGGATTTCAATATATGGTAATTCATTTATGCTGCTATGGAAATGTTAAATGTGGTTGTGATGTTTCTTTGCTGCTAGAATTTGAATGTTATGGTTTTTTTTGTTGTATCACTTGCTTTTTTCATATATAAATTGATGTTGATCATGTCCTCACAATGAATGGCTCATATTAAAACGGAGGATTGTATCAGCGGAATGCATTTGATCTAAAGGTCATTTGAGGATTTTTAGCAATTGTGGATGTATTGTATCATCAACTAGTGGTTTTGAGAGTCTAACTTATAGGTTCTTGTGTCTTTGTGAAAGCATGATGAGTAAGTTTAGTAATGGAATTCTTCATTGGTTGTGTAGTTTGCAAAATCTTTGACAAGTAAAACAGTTAGCCTTCTGTACCATCAATATAGAGGACAAGCTGAGAGTTGGAATATTGTGCTATAGGTTAGGCTTTCGTGTTGGCAATCTCATTGATTTAGAGATAAATTATATGCAGCTTATGGTAAAGATGATCATTCAAGAGTTTTATCATCATATCAATTTAAGAAACTGCATGGTTTACACATTGCCTTTAGGACTAATTAGGAGCACTGACATTTTGGGTAAGGATAATTTTATCTCTTGGTAGTATGCATAACGACAAACATGCTAAATAATTCTTCATGATTTGCCATGTATTTGTTTGTGTTTAAATACATACATAGACTTCCTTGTTTTTTTATGTGCTTATAGCAGTGCTCTTTCTCCTGGCGTCTCTTACTGATAAATGATTAGATTTATTGGTTAATGATGTTAAACTGAAGAAGTCTTGTATAAGACATTGTTGATAATGTTATTTATTTTGTTATGCAGGAGTTGGAAAATCATGTCTTCTGTTGCAATTTACTGACAAACGATTTCAACCAGTTCATGATTTGACCATCGGTGTTGAATTTGGGGCTAGAATGATCACAATAGACAACAAGCCCATTAAACTACAAATCTGGGATACAGTTAGTGAAACATCTTTCCTTCTCTTTCTGTTGATTTAATTAAGTTTTATGCAAAAAAAAATGCTAAGATTAATTAACAGTTCAGATAGTTGTTGTGGCTACTGCTTAATAGGAACTTTGGATTATCTATCCTAATGTTCAATGTTGTGTTGTTGATGGTAGAATCGTTTTTATGGTGTAATCTTTGTTCTCTTTTGGTCGTTTGAATGACTAAAAGCATGATCTAATGAGTGTTCTCCATTACAGGCGGGTCAAGAATCATTCAGATCTATCACGAGGTCATACTACAGAGGTGCTGCTGGGGCACTACTTGTTTATGATATTACAAGGTATTCTCTGCAGTGTCTTTGGCCTTCCCATACCTGTAGGGAACTTGAGGTTACATGTCTGATAATATAAATGAATATATTTCTTGATCTTCCTTTTATCGTTGATCAATGTTCCAGAAATATTCTTCTACAAATTCTTGTTACCCCAGGATGCATTCTAAGTGCTAAGTTCCCAGCATTATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATTCAGTTTTTTGTTAATTTTCTTACAGAACATTTTCGATGTTTACCTAATGATCGATGAACATTCCCTTCTAATCTTTCACTTTATAACTTTTAGCCTATCTAATGATGTTCCAGTCAAATGCCTAACATGTCTTTGGCTATGAGAGCATCAGAACAAGTCTGTAAAGCTAACTATAAGCACTCGGTTATTTTGTTCTTATTCTTTTTTTCTTCAAATGAAGGAAATTTAATATTAAACTAAGGTGTATATATGAAGATATTATGGAAGTTTGGTCTATTTGATGTATTGGTGATTTTGTTTTCCCCATGCCAAAACATTTTAGGAGGGAAACATTTAATCACCTAGCTAGTTGGCTAGAAGATGCAAGGCAGCATGCAAATGCAAACATGACCATAATGCTGATTGGAAACAAGTGTGATCTGGCTCACAGAAGGGCTGTAAGCACCGAGGAAGGCGAACAATTTGCCAAGGAAAATGGGTTGATATTTATGGAGGCCTCTGCCAAAACAGCTCAGAATGTTGAAGAGGTGGGGGATTCTTCCATCCGCTACTTTCCTGACCTTTAATATCCATCCATGGACATCTTTCTCTAACTAAACTTATAAATTGGTTGTTTATCTGGTTTCTTGTTTCTGCTGCTTTTCAGGCTTTTATCAGAACAGCCTCAACAATTTATAAGAAAATACAGGATGGAGTGTTTGATGTATCAAATGAGGTATGTCACGCCCTGACCATTTTTATATATCTATAGTCTTTTAGTGTGGCTAATTTCCGTGGACATCTGTTAATATGAAAATGGCGATCGTCTAGAAAGACATAATTGACATCTCATGAAGTAAAGAGTTATGAAGAAGGTTTTTTTTGCTTGTTCTAAACCTGTTTTAATTTTGTGTTCTTGATTGAAATTAAATAAAAAAGTTGGAGGATATTCTCTCCTTTGAAAACATATATGCGTTTGGATACTTTGGAATTTTATTCCCCAAAAGAATACTTGTTTGCATCTTGTAATAATTGCAGTTTTTTGAAGTTTTGAGTGTGTTTTATTAGTGGATAACTTTTCTTTTGAAATTGCTAAAACCGCTTCTTGCAATATGATTTTTAAAGGAAGTCTTTTGACCAATACTTCTTGAAAAAAACACAAACTTGAACACCTATTTTGAAAGTTTTCTGCAAGATAATTACTATAAATTATCTGCAAACAGATGTCACCTAAGGAGGTTCATCCTCTATGTAATCTGGTCACTTGACCAAAGATCAACATCCTGCATGAGAAAAAAGACCATCTGGAGAAACCATTGTTGGGTTCATGTCTTGTGTATTTGCAAATGTCTAGCTGTATTATTTGCAGATAAATGCTGTTATAGCTTCTGAGATGCCAGTTTCCGTGATGAATAGTCTTGCAAAATGTAACATCCAAATTGGGAGTAGATGTTTAAGCAGTTCCTAATTGTATCAGTCTTCTCATTTTCTGGGATCTTTAATTCATCTACTTTGACCTATAAAAATAATGTGTGAATTCAGTGTCCTTTTGAGAGCTAGATACCTAGAACTCACGGATATGGAACATGCTGTCTTAGTGTGGGAAGGCAACATTAATTTGGAGGAAGTTAAGAAGATATTATTCCAACCATCCAAAGAAATACCGATCCATCAATCTGCATTCTGCTGACTTGTGAGTTCATACCCCAATCTGGGACCAATAGTTGGGCATATTGTTAGCAGAGTTCCCTGTTTAATGTAGTATCATTTCAGTTGAGTAGTGATAGAATAGCATTGATGAATGTCCTAATCATTGTTTTGAGAACCAAGAAAACAGAAACTTACGTTGCAAGTATTTCAGTAAGTACTTGTAAATCTCAGTGATAATTGATTATCAACATGTATAATTATCATTTACGTAATAGTAGATGGTTTCCGAAACTAATGCTTGCCCTTTTTTCATTTGCAGTCCTATGGAATAAAAGTTGGATATGGAGGTATTCCGGGGCCTTCAGGTGGAAGAGACGGAGCTGCTTCACAAGGAGGGGGTTGTTGTACTTGAAAATGGACATTTATTGTTCGCAAACCTATTATGTTCCTATGGTTGTTTATTTGTAGTTTGGTATTGCTCTTTAGTTTATTCCTTTTAATGAAAGGATAATATATGTGCAAAAATAAGTAAATTTGGTACATAAAAGACATTCTTTTTCTTTGTGCATTTTCTGTTTATTGAGTTGTCAAATGTGAATTTATTTCAG

Download sequence region

Download sequence (4.2Kb)

Get flanking sequences on SL2.50ch07

mRNA Solyc07g056150.2.1

Ontology terms

terms associated with this mRNA

GO:0015031 – protein transport
GO:0007264 – small GTPase mediated signal transduction
GO:0005525 – GTP binding
GO:0007165 – signal transduction
GO:0005622 – intracellular

cDNA sequence

spliced cDNA sequence, including UTRs

>Solyc07g056150.2.1 Ras-related protein Rab-2-A (AHRD V1 ***- B6T1U8_MAIZE); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type
GATTACCCGACCCGTTTAACAGCTTTGCTGGAGTCGTGCCTTCTCTTCGAAGGAAAATCCTTCGACACGCCAAAATTGGCAAAGTAGTTCAATAATTTACGTATATTCAAACGCCTTTGCGCCTCTGTAAATTCTCCCGTCGTTTCTTCTTTCTCTCTCCGCATCACCGACAGAGAAGAAGAAGAGGAAGGATATACCGATACAGCAATTATTAGGGATTTGTATATTATTTTTTCAGGTAAAATATACATTTACAACTATTGTTTTCTACAGCTCAGACGATATTCAGCCATTACTCTTTCTCCGGAATTTGCTTCTCAAACATGTCTTACGCCTATCTCTTCAAGTATATCATCATCGGCGATACCGGTATATTTTTTTCCTGATTTTTCTGGTTTTATTTGTGTAATTTTATTGTTTAACACCTGATTTGGATCTGATCAATAGGTTCCTGGTGAGTTTGAATTGAACTTAGTTTTTCTTTTCATGAATTTTTAATTATCTCGATCTGGAATAAGGATTTCAATATATGGTAATTCATTTATGCTGCTATGGAAATGTTAAATGTGGTTGTGATGTTTCTTTGCTGCTAGAATTTGAATGTTATGGTTTTTTTTGTTGTATCACTTGCTTTTTTCATATATAAATTGATGTTGATCATGTCCTCACAATGAATGGCTCATATTAAAACGGAGGATTGTATCAGCGGAATGCATTTGATCTAAAGGTCATTTGAGGATTTTTAGCAATTGTGGATGTATTGTATCATCAACTAGTGGTTTTGAGAGTCTAACTTATAGGTTCTTGTGTCTTTGTGAAAGCATGATGAGTAAGTTTAGTAATGGAATTCTTCATTGGTTGTGTAGTTTGCAAAATCTTTGACAAGTAAAACAGTTAGCCTTCTGTACCATCAATATAGAGGACAAGCTGAGAGTTGGAATATTGTGCTATAGGTTAGGCTTTCGTGTTGGCAATCTCATTGATTTAGAGATAAATTATATGCAGCTTATGGTAAAGATGATCATTCAAGAGTTTTATCATCATATCAATTTAAGAAACTGCATGGTTTACACATTGCCTTTAGGACTAATTAGGAGCACTGACATTTTGGGAGTTGGAAAATCATGTCTTCTGTTGCAATTTACTGACAAACGATTTCAACCAGTTCATGATTTGACCATCGGTGTTGAATTTGGGGCTAGAATGATCACAATAGACAACAAGCCCATTAAACTACAAATCTGGGATACAGCGGGTCAAGAATCATTCAGATCTATCACGAGGTCATACTACAGAGGTGCTGCTGGGGCACTACTTGTTTATGATATTACAAGGAGGGAAACATTTAATCACCTAGCTAGTTGGCTAGAAGATGCAAGGCAGCATGCAAATGCAAACATGACCATAATGCTGATTGGAAACAAGTGTGATCTGGCTCACAGAAGGGCTGTAAGCACCGAGGAAGGCGAACAATTTGCCAAGGAAAATGGGTTGATATTTATGGAGGCCTCTGCCAAAACAGCTCAGAATGTTGAAGAGGCTTTTATCAGAACAGCCTCAACAATTTATAAGAAAATACAGGATGGAGTGTTTGATGTATCAAATGAGTCCTATGGAATAAAAGTTGGATATGGAGGTATTCCGGGGCCTTCAGGTGGAAGAGACGGAGCTGCTTCACAAGGAGGGGGTTGTTGTACTTGAAAATGGACATTTATTGTTCGCAAACCTATTATGTTCCTATGGTTGTTTATTTGTAGTTTGGTATTGCTCTTTAGTTTATTCCTTTTAATGAAAGGATAATATATGTGCAAAAATAAGTAAATTTGGTACATAAAAGACATTCTTTTTCTTTGTGCATTTTCTGTTTATTGAGTTGTCAAATGTGAATTTATTTCAG

Download sequence (1.9Kb)

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc07g056150.2.1	SL2.50ch07:63995080..63998114	213	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc07g056150.2	SL2.50ch07:63994885..63999176	4,292	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc07g056150.2.1.1	SL2.50ch07:63998066..63999176	1,111	-	2
exon	exon:Solyc07g056150.2.1.2	SL2.50ch07:63997676..63997815	140	-	n/a
exon	exon:Solyc07g056150.2.1.3	SL2.50ch07:63997347..63997429	83	-	1
exon	exon:Solyc07g056150.2.1.4	SL2.50ch07:63996595..63996799	205	-	n/a
exon	exon:Solyc07g056150.2.1.5	SL2.50ch07:63996407..63996475	69	-	n/a
exon	exon:Solyc07g056150.2.1.6	SL2.50ch07:63994885..63995173	289	-	n/a
intron	intron:Solyc07g056150.2.1.2	SL2.50ch07:63997816..63998065	n/a	-	n/a
intron	intron:Solyc07g056150.2.1.3	SL2.50ch07:63997430..63997675	n/a	-	n/a
intron	intron:Solyc07g056150.2.1.4	SL2.50ch07:63996800..63997346	n/a	-	n/a
intron	intron:Solyc07g056150.2.1.5	SL2.50ch07:63996476..63996594	n/a	-	n/a
intron	intron:Solyc07g056150.2.1.6	SL2.50ch07:63995174..63996406	n/a	-	n/a

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Related views

Genetic loci

Tomato locus Solyc07g056150

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17885105%2Fdetails feature 17885105

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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