Solanum lycopersicum mRNA Solyc07g052980.2.1

mRNA details  
Name
Solyc07g052980.2.1
Type
mRNA
Length
1,125
Organism
Solanum lycopersicum
Description
Xyloglucan endotransglucosylase/hydrolase 5 (AHRD V1 **** C0IRH8_MALDO); contains Interpro domain(s) IPR016455 Xyloglucan endotransglucosylase/hydrolase
Location(s)
SL2.50ch07:61401256..61403204
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006265
  • GO:0005975
  • GO:0048046
Length
1949
Nb exon
5
Sifter term
GO:0016798
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g052980.2.1 Xyloglucan endotransglucosylase/hydrolase 5 (AHRD V1 **** C0IRH8_MALDO); contains Interpro domain(s) IPR016455 Xyloglucan endotransglucosylase/hydrolase

CATCTTAAACAAAACATATATTCATAAAATCTCTGAAAATTTAAAAAAAATAAAATGGTGAGTTTTAATTGGGTTTTTTCGAGCTTTGTGATGCTGTTTATGGTGGGTTTGGTTAGCTCTGCAAAATTTGAGGAGCTTTATCAACCCAGTTGGGCTTTTGACCATTTGACAACTGAAGGAGAGATTCTTAGAATGAAATTGGATCATCTTTCTGGTACTGGGTTTCAATCTAAGAGCAAATATATGTTTGGGAAAGTTACTGTTCAGATTAAGCTTGTTGAAGGTGACTCTGCTGGAACTGTCACTGCATTCTATATGTCATCAGATGGACCAACCCACAATGAGTTTGATTTTGAATTTTTAGGCAATACAACTGGTGAACCATATACAGTACAAACAAATGTGTATGTCAATGGTGTTGGTAACAGAGAACAGAGATTGAAGCTTTGGTTCGACCCATCGAAGGATTTTCACTCTTATTCCATCATGTGGAATCAACGTCAAGTTGTATTCTTGGTAGATGAAACCCCTGTTCGAGTGCATTCGAATTTGGAGCATAGAGGAATCCCATACCCCAAGGATCAACCAATGGGTGTGTATAGTTCGATTTGGAATGCAGATGATTGGGCTACACAAGGCGGGCTCGTTAAGACTGATTGGTCACACGCGCCCTTCGTAGCATCCTATAAGGGATTTGAGATTAACGGTTGTGAGTGCCCGGCAACTGTTGCAGCTGCTGAGAATACTCGGCGTTGCAGCAGTAATGGGCAGAAGAAGTACTGGTGGGATGAACCTGTTATGTCCGAGTTGAATTTGCACCAGAGTCACCAGCTGATATGGGTCAGGGCGAACCATATGGTTTACGATTATTGCACGGATAGCGCTAGGTTCCCTGTTGCCCCTGTTGAGTGCCAGCACCACCAGCACAAGACGAATCATAACTAGGTGTGGAGGAAAATTGGAGTTCAGTCTTGCATTGTATAAAAAGATTTAGATAAAAAAGAAAAAAATGACATGAACTCCATGTTACATATTTTTTGTGCCACTAGTATGTAAAAATTTTCATTGTCTCTTTGTTTTAATGTTTATGTTAGTTTAATGAAAATTTTTTTTCTTCGTTGGACC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g052980.2.1SL2.50ch07:61401309..61402762297+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g052980.2SL2.50ch07:61401256..614032041,949+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g052980.2.1.1SL2.50ch07:61401256..61401469214+n/a
exonexon:Solyc07g052980.2.1.2SL2.50ch07:61401555..61401655101+n/a
exonexon:Solyc07g052980.2.1.3SL2.50ch07:61402044..61402237194+2
exonexon:Solyc07g052980.2.1.4SL2.50ch07:61402327..61402920594+n/a
exonexon:Solyc07g052980.2.1.5SL2.50ch07:61403183..6140320422+1
intronintron:Solyc07g052980.2.1.1SL2.50ch07:61401470..61401554n/a+n/a
intronintron:Solyc07g052980.2.1.2SL2.50ch07:61401656..61402043n/a+n/a
intronintron:Solyc07g052980.2.1.3SL2.50ch07:61402238..61402326n/a+n/a
intronintron:Solyc07g052980.2.1.4SL2.50ch07:61402921..61403182n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17882180%2Fdetails feature 17882180
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