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Solanum lycopersicum mRNA Solyc07g049500.2.1

mRNA details  
Name
Solyc07g049500.2.1
Type
mRNA
Length
3,098
Organism
Solanum lycopersicum
Description
Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch07:59770033..59780622
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
10590
Nb exon
22
Sifter term
  • GO:0035197
  • GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g049500.2.1 Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

GCTGTGTTCACATGATGTATCATAGGGGGTATAGAAAGGACTCTGATTTCAGTAGCCTTCATCTTTTGATGTTTTTTTGGCTAACAACTTCTCCTAGGTCATTGTTCGGTTTGAAACATGGAAAATAGTGAGGGAAGAGAGAGTTGTTTCTCACCTGTGGAAGAACCGCCACCAGTTATAATGTCAAATGCAGAGCCAGAGAGAGTTGATCAGCCCAAGCGTACTATAATGATGAGGGCTGGGGATGGAACATCTGGACGAGAGATTTCTTTGCTTGCAAACCACCTAAAAGTTTCTATCAAGTGTCCTGATGAAATATTTTACCATTATAGTGTCTCTATAACTTCTGATGAAAAGAGGGCCGTTAACAGCAAGGTGATTAGAAGAAAAATTGTAGATAAACTTCACGAAACATACTCATCTGAATTTGCTGGGAAGAAATTTGCTTATGATGGAGAGAAGAATTTGTACACAGTGGGACCTCTACCACGCAACAGACTGGAATTCACGGTGGTTGTTGAGGAGTCTAGTGCACGGCAGGCTAGTGAGAGCCCCTCAGATAATGGAAGCCTCAATCACTCCATTAAAAGGTTTAAGCATTCTCTTCATTCGAAGGCTTTCCTGGTGGAGATCGACTATGCAGCTAAAATACCATTAAGGTCTGTTGATCTTGCCCTTCAAGGAGCTGATCCAGAAAATGTTCAAGATGCATTGAGGGTTCTAGATATTATATTGCGACAAAAAGCTGCTAATAGAGGATGCCTCTTGGTTAGACAGTCATTTTTTCATGATGACTCAAGGAACTTCACAGATGTTGGAGGGGGTGTAATGAGTTGCAGGGGGTTACATTCCAGCTTTCGTCCAACTGATGGTGGCTTGACCTTGAACATGGATGTGTCTACAACTATGATCCTATCACCTGGACCTGTAATTGATTTTTTGCTTGCTAACCAGAATGTAAAAGAGCCTCGTTATATTGATTGGGCAAGAGCAAAAAGAATGTTGAAGAATATGAGAGTTAAAGCTAAGCATGACAACAGGGAATTTAAAATTATCGGTTTGACTGACAAACCTTGCAATCAACAGTTATTTTCTATGAAGGTCAAAAATGGTGGCAGTCCAGATGATGGAGGAGAGACCCTAGATATAACTGTTTATCAGTATTTCACTAAACATCGTAACATAGAACTTTCATCCTCAGTTTATATGCCATGTCTGGACGTTGGAAAACCAAAACGACCAAACTATCTGCCACTGGAGCTGTGTTATTTGGTCTCCCTTCAAAGATACACAAAGGCATTATCATCGGTCCAGAGGGCATCTTTAGTTGAAAAATCAAGGCAGAAGCCTCGTGAAAGAATTAAAGTTATAACAGATGCTGTGAGGGACTACAGCTATGACGATGATCCCCTTCTTGTTGCTTGTGGAATCTCAATAGAAAAGCAGTTGATTCAAATGAACGGCAGGGTCCTTGAAGCCCCAAAGTTGAAGGTTGGTAATGGCGAAGAGGTCACTCCCTGTGACGGCAGGTGGAATTTCAAGAACAAGCATCTTTTCAACCCTGCACGAATTGAACGCTGGGCAGTGGTCAACTTCTCTGCCAATTGTGATACAAGTCACCTTTCAAGGGAGCTTATTAGTTGCGGAAGGAGCAAAGGCATTCATTTTGAGCGCCCACATACACTCATTGAGGAAGATCCCCAGTATAGGCGAGCTGGGCCTGTAGTTCGAGTAGAACAGATGTTTGAAGAGATAATAGCTAGACTGCCTGGCCATCCTGATTTCCTCCTCTGTGTCTTGCCAGAGCGGAAAAACTCAGAGTTATATGGACCTTGGAAGAAAAAAAGTTTGACTGACTTGGGAATTGTTACTCAATGTATCTCTCCGTTAAAGATCACCGATCGATATCTAACAAATGTGCTTCTCAAAATTAATGCTAAGCTTGGAGGGACCAATTCACTGTTGGCTATGGAACATACCTCTCATCTACCGCTTATTAAGGACACTCCAACAATGATCCTGGGAATGGACGTCTCTCATGGATCTCGTGTTCAATCAGATATTCCATCAATTGCTGCGGTTGTAGGATCCTTATACTGGCCATTAATATCCAAGTATAAGGCAGTTGTGCGCAGTCAATCTCCAAAGTTGGAAATTGTAGAATCCTTATACAAGCCTTTACCAAATGGAGACGATGAAGGAATCATGAGAGAACTACTTCTGGACTTCTATAGGACAAGTAACAGGCATAAGCCAGCTCAAATTATTGTCTTCAGGGATGGCGTCAGCGAATCACAGTTTAGTCAAGTTCTGAACCTTGAGCTAGATCAAATGATCAAGGCATACAAGCATCTTGGTGAGGGCGGCAACCCTAAGTTCACCTTGATCGTGGCTCAAAAGAATCACCATACAAAACTATTTCAAGCTAATGCAGTTGATAATGTACCACCAGGTACTGTTGTAGACACAAATATTGTGCATCCTAGAAATAATGATTTTTTCATGTGTGCACATGCGGGGATGATTGGAACAACTAAACCTGCACATTATCATGTATTGCTTGATGAGATTGGTTTCGCACCTGATGTCCTGCAAAATCTCATACATTCACTATCATATGTGTACCAAAGGAGTACCAGCGCGACCTCTATTGTGGCTCCTGTGCGTTATGCACACCTAGCAGCACAACAATTCGGGCAGTTTGATAAGTACGAGGACCACTCCGAAACTTTGTCAGAACAGGGAAGTGTCAAATCAATTGGGACTACTCCGGTAACCCAACTGCCCAGGCTGCACAAGAATGTCAGCGACTCAATGTTTTTCTGTTGAAAATTGTAAAGCTTTTAAATGCATATGCTGTAAATCCTTAGTAGTTTGGTAGTATAGTACCCGGCTCCAAATTTTGTCGAGGCCTTCGGTTAGTTAAGTGCTTTAAGGTCGTCTAACAAGGATCATGCTTCGAGTTTGTTTTATTTTTTTGACGTAATTAAGATAGAAATTTCACCATTTAAAGGGCATAGAATTTTGGGCGTTGCTCCATTTAGCTATTTTAGAAGTTGAACTGATTTTTGTATAGTCAAAGTTTGTCTAAGTTTGGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g049500.2.1SL2.50ch07:59770301..59780505904-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g049500.2SL2.50ch07:59770033..5978062210,590-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g049500.2.1.1SL2.50ch07:59780290..59780622333-n/a
exonexon:Solyc07g049500.2.1.10SL2.50ch07:59778328..5977839063-n/a
exonexon:Solyc07g049500.2.1.11SL2.50ch07:59777867..59777980114-n/a
exonexon:Solyc07g049500.2.1.12SL2.50ch07:59777615..59777780166-2
exonexon:Solyc07g049500.2.1.13SL2.50ch07:59777428..59777540113-n/a
exonexon:Solyc07g049500.2.1.14SL2.50ch07:59777196..59777333138-n/a
exonexon:Solyc07g049500.2.1.15SL2.50ch07:59776977..59777107131-1
exonexon:Solyc07g049500.2.1.16SL2.50ch07:59776823..5977688866-1
exonexon:Solyc07g049500.2.1.17SL2.50ch07:59771522..5977158564-n/a
exonexon:Solyc07g049500.2.1.18SL2.50ch07:59771150..59771261112-2
exonexon:Solyc07g049500.2.1.19SL2.50ch07:59770990..5977106374-n/a
exonexon:Solyc07g049500.2.1.2SL2.50ch07:59779999..59780204206-1
exonexon:Solyc07g049500.2.1.20SL2.50ch07:59770681..5977077595-1
exonexon:Solyc07g049500.2.1.21SL2.50ch07:59770567..5977059832-2
exonexon:Solyc07g049500.2.1.22SL2.50ch07:59770033..59770477445-n/a
exonexon:Solyc07g049500.2.1.3SL2.50ch07:59779691..59779906216-1
exonexon:Solyc07g049500.2.1.4SL2.50ch07:59779480..59779616137-2
exonexon:Solyc07g049500.2.1.5SL2.50ch07:59779303..5977940098-n/a
exonexon:Solyc07g049500.2.1.6SL2.50ch07:59779126..5977922398-1
exonexon:Solyc07g049500.2.1.7SL2.50ch07:59778873..59779044172-n/a
exonexon:Solyc07g049500.2.1.8SL2.50ch07:59778658..59778774117-n/a
exonexon:Solyc07g049500.2.1.9SL2.50ch07:59778478..59778585108-n/a
intronintron:Solyc07g049500.2.1.10SL2.50ch07:59778391..59778477n/a-n/a
intronintron:Solyc07g049500.2.1.11SL2.50ch07:59777981..59778327n/a-n/a
intronintron:Solyc07g049500.2.1.12SL2.50ch07:59777781..59777866n/a-n/a
intronintron:Solyc07g049500.2.1.13SL2.50ch07:59777541..59777614n/a-n/a
intronintron:Solyc07g049500.2.1.14SL2.50ch07:59777334..59777427n/a-n/a
intronintron:Solyc07g049500.2.1.15SL2.50ch07:59777108..59777195n/a-n/a
intronintron:Solyc07g049500.2.1.16SL2.50ch07:59776889..59776976n/a-n/a
intronintron:Solyc07g049500.2.1.17SL2.50ch07:59771586..59776822n/a-n/a
intronintron:Solyc07g049500.2.1.18SL2.50ch07:59771262..59771521n/a-n/a
intronintron:Solyc07g049500.2.1.19SL2.50ch07:59771064..59771149n/a-n/a
intronintron:Solyc07g049500.2.1.2SL2.50ch07:59780205..59780289n/a-n/a
intronintron:Solyc07g049500.2.1.20SL2.50ch07:59770776..59770989n/a-n/a
intronintron:Solyc07g049500.2.1.21SL2.50ch07:59770599..59770680n/a-n/a
intronintron:Solyc07g049500.2.1.22SL2.50ch07:59770478..59770566n/a-n/a
intronintron:Solyc07g049500.2.1.3SL2.50ch07:59779907..59779998n/a-n/a
intronintron:Solyc07g049500.2.1.4SL2.50ch07:59779617..59779690n/a-n/a
intronintron:Solyc07g049500.2.1.5SL2.50ch07:59779401..59779479n/a-n/a
intronintron:Solyc07g049500.2.1.6SL2.50ch07:59779224..59779302n/a-n/a
intronintron:Solyc07g049500.2.1.7SL2.50ch07:59779045..59779125n/a-n/a
intronintron:Solyc07g049500.2.1.8SL2.50ch07:59778775..59778872n/a-n/a
intronintron:Solyc07g049500.2.1.9SL2.50ch07:59778586..59778657n/a-n/a
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