Solanum lycopersicum mRNA Solyc07g045290.2.1

mRNA details  
Name
Solyc07g045290.2.1
Type
mRNA
Length
2,515
Organism
Solanum lycopersicum
Description
Long-chain-fatty-acid--CoA ligase 3 (AHRD V1 **** ACSL3_HUMAN); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase
Location(s)
SL2.50ch07:58393554..58401187
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0008152
Length
7634
Nb exon
11
Sifter term
GO:0004467
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g045290.2.1 Long-chain-fatty-acid--CoA ligase 3 (AHRD V1 **** ACSL3_HUMAN); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase

GTGCGATATATAAGATGGAAGATTCCGAGGGAAGTAATCCATATATGAGTATACTGAAGAGACTGGCCAGCTATGATTATATTTCCAAAAATTATGGGTCATCTGGGATTGCTGGTGCATTTTTTATTGCCATTATTATACCAACATTCCTCTCCATATTACTTATGGGGAAGAAGAAGGCAAAACAAAGAGGTGTTCCGGTTCAAGTTGGCGGTGAGCCAGGTCTTGCAATGCGCAATGCTAAATCAGCCAGATTAGTTGAAGTTCCCTGGGAAGGGGCTACAACTGTAGCAGCTCTATTTGAGCAGTCTTGTAAAAAACATTCCTCTTATCGCTGTCTTGGATCTAGAAAGCTAGTTAGCAGGGACTTTGTTACTGCAAGTGATGGAAGGAAGTTTGAGAAACTTCACTTGGGGGAGTATCAGTGGGAGTCTTATGGACAAGTATTTGATCGCACTTGCAACTTTGCCTCTGGTCTTATTAGTTTGGGTCATGATGTGGACACTCGTGCTGCTATCTTCGCAGAATCTCGTGCGGAGTGGCTCATTGCCTTTCAGGGATGTTTCCGGCAGAATATTACCGTTGTTACCATTTATGCTTCTTTGGGTGATGATGCACTTATCTATTCACTCAATGAGACTCAAGTATCTACATTAATATGTGATGCCAAGCAACTGAAAAAAGTGGCTTCTGTTAGTTCGAGCCTGAAAACCATCAAGAATGTCATCTATTTCGAGGATGACGAGACGGCAACAGATTCCACAAATATTGACAGCTGGAGGGTGTCGTCTTTCTCAGAAGTTGAAAAGCTGGGTAGAAATAGTCCTATTCAGGCAAGATTGCCTGTCAAAGAAGATATTGCTGTGATCATGTATACAAGTGGCAGTACAGGCTTGCCTAAGGGTGTTATGATAACTCATGGCAACATTGTAGCCACTGCAGCTGCTGTGATGACTGTGATTCCAAAACTTGGAACCAGTGATGTCTATTTGGCTTACCTTCCTTTAGCTCACGTTTTTGAGTTGGCTGCTGAGACTGTAATGCTGACTGCAGGTGCTTGTATTGGTTATGGCTCAGCCCTCACATTGACGGACACATCTAACAAAGTCATGAAGGGGACCAAGGGAGATGCTACAGTTTTAAAACCTACTTTAATGGCTGCAGTTCCAGCCATTCTAGATCGTGTTCGGGATGGTGTTATGAAGAAGGTTGAGGAGAAGGCAGGTTCTGCCAAGAAACTTTTCCACATCGCCTTTAACCGTCGATTGGCTGCTATGGAAGGTAGCTGGTTTGGAGCTTGGGGTCTAGAGAAACAATTGTGGGATATCATTATATTCAAAAAGGTGAGGGCTGTGCTTGGAGGAGATATCCGTTTCATGCTTTGCGGTGGTGCTCCTCTATCAGGGGATACTCAAAGATTTATCAACATTTGTATGGGAGCTCCAATTGGTCAAGGGTATGGTTTGACAGAGACATTTGCTGGAGCTGCTTTTTCTGAGTGGGATGATCCTTCTGTCGGGCGTGTTGGTCCACCTCTTCCTTGTTGCTACATAAAGCTTATTACTTGGGAAGAAGGAGGTTACAGAATAGTTGATAAGCCTATGCCTCGGGGAGAAGTAGTTGTTGGTGGATGCAGCATAACTGCTGGTTACTTCAACAATGAGGAAAAAACTAATGAGGTTTATAAGGTTGATGAGACAGGCATGCGCTGGTTCTACACTGGTGACATTGGAAGGTTTCATCCTGATGGGTGCATTGAAATTATTGATAGAAAGAAGGATATTGTTAAGCTTCAGCACGGGGAGTATATCTCACTTGGAAAGGTTGAGGCAGCACTTCTATCAAGCAATTACGTGGAGAGCATCATGGTGTACGCAGACCCCTTCCATAATTATTGTGTAGCTTTAGTTGTCCCTTCACGCCCGGTGCTTGAGAAATGGGCCCAAGAAAATGGCATCCAGCACAAAGATTTTTCCGAACTGTGTGACAAAGTAGAATCAGTCAATGAGATCAAGCAATCACTTTCAAAGGTAGCAAAAGCTGCTAGATTGGACAAGTTTGAGCTTCCTGCCAAGATCAAGTTAATACCAGAGTCTTGGACTCCTGAGTCTGGATTGGTAACTGCTGCTCTGAAATTGAAACGGGAACCTCTGAAGGCTCGATACAAGAATGAGTTAGAAAAGTTATATCAGTGAATCATACTTCCTTGCCGAGTAACACTTCATTTAGCAGCTTTATGTGCCTCTTGCCAGTTAATCATCTCAAGTTGTCCTGTTGAAGTTCAATTACACGTCTCCTTTTGCTGTTGCGTCAATGTTAAAGCAGTTGTATGCATCTTTCCATATGGTTGTCCTGGTTAAGCAGCGAGGTATAATAGATTTTGTTCTCGCCTCGCCAGCTTCAGTTATTCATCTTATTGAGCTTCACATATGGAGGTATACAGTCAGTGTCTTTGTTTGTTAATCATTTCTCAGACAGGTAAATAAAGTTATTTGATTGCTTTTTCTCTCTATTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g045290.2.1SL2.50ch07:58393567..58400867727+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g045290.2SL2.50ch07:58393554..584011877,634+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g045290.2.1.1SL2.50ch07:58393554..58394110557+n/a
exonexon:Solyc07g045290.2.1.10SL2.50ch07:58398510..58398716207+n/a
exonexon:Solyc07g045290.2.1.11SL2.50ch07:58400703..58401187485+n/a
exonexon:Solyc07g045290.2.1.2SL2.50ch07:58394203..5839428381+n/a
exonexon:Solyc07g045290.2.1.3SL2.50ch07:58394384..58394647264+n/a
exonexon:Solyc07g045290.2.1.4SL2.50ch07:58395081..58395212132+n/a
exonexon:Solyc07g045290.2.1.5SL2.50ch07:58395304..58395477174+n/a
exonexon:Solyc07g045290.2.1.6SL2.50ch07:58395593..58395822230+n/a
exonexon:Solyc07g045290.2.1.7SL2.50ch07:58395998..58396115118+n/a
exonexon:Solyc07g045290.2.1.8SL2.50ch07:58397818..58397949132+1
exonexon:Solyc07g045290.2.1.9SL2.50ch07:58398036..58398170135+n/a
intronintron:Solyc07g045290.2.1.1SL2.50ch07:58394111..58394202n/a+n/a
intronintron:Solyc07g045290.2.1.10SL2.50ch07:58398717..58400702n/a+n/a
intronintron:Solyc07g045290.2.1.2SL2.50ch07:58394284..58394383n/a+n/a
intronintron:Solyc07g045290.2.1.3SL2.50ch07:58394648..58395080n/a+n/a
intronintron:Solyc07g045290.2.1.4SL2.50ch07:58395213..58395303n/a+n/a
intronintron:Solyc07g045290.2.1.5SL2.50ch07:58395478..58395592n/a+n/a
intronintron:Solyc07g045290.2.1.6SL2.50ch07:58395823..58395997n/a+n/a
intronintron:Solyc07g045290.2.1.7SL2.50ch07:58396116..58397817n/a+n/a
intronintron:Solyc07g045290.2.1.8SL2.50ch07:58397950..58398035n/a+n/a
intronintron:Solyc07g045290.2.1.9SL2.50ch07:58398171..58398509n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17879425%2Fdetails feature 17879425
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