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Solanum lycopersicum mRNA Solyc07g043620.2.1

mRNA details  
Name
Solyc07g043620.2.1
Type
mRNA
Length
1,849
Organism
Solanum lycopersicum
Description
Auxin response factor 6-1 (AHRD V1 **** D9IUY5_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch07:57561281..57566695
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
Length
5415
Nb exon
12
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g043620.2.1 Auxin response factor 6-1 (AHRD V1 **** D9IUY5_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

ATGAGGGTATCATCATCTGGGTTCAATCCTCAGCCAGAGGAAGCAGCAGGGGAGAAGAAATGCTTGAATTCAGAGTTGTGGCACGCGTGTGCAGGACCACTAGTTTCACTTCCACCTGTAGGAAGCAGAGTTGTGTATTTTCCTCAAGGGCATAGTGTGCAGGTTGCTGCCTCAACCAACAAGGAAGTAGATGCTCATATCCCTAATTATCCTGGTTTACCGCCTCAACTAATTTGTCAGCTGCACAACTTGACAATGCATGCAGATGTTGAGACTGATGAAGTATATGCTCAAATGACATTGCAGCCACTAAGTCCACAAGAGCAGAAGGATGTGTGCCTGCTACCGGCAGAACTTGGCATCCCGAGTAAACAACCAACCAACTATTTCTGTAAAACTTTGACGGCAAGTGACACCAGTACTCATGGTGGATTCTCTGTCCCTCGCCGAGCCGCAGAAAAAGTTTTTCCCCCTCTTGATTACTCTCAGCAGCCACCCTGTCAAGAGTTGATTGCAAAAGATCTCCATGGGAACGAATGGAAATTACGGCATATTTTTCGCGGACAACCAAAGAGGCATCTATTGACAACCGGATGGAGTGTGTTTGTGAGTGCAAAGAGACTTGTTGCAGGCGATGCAGTCATCTTTATCTGGAACGAAAACAATCAATTGCTTTTGGGGATTCGACGTGCTAATCGTCCTCAAACTCTCATGCCTTCTTCAGTCTTGTCAAGTGATAGCATGCACATTGGTCTCCTGGCTGCAGCAGCTCATGCAACTGCAACTAATACTCGCTTTACAATATTTTATAATCCAAGGGCCAGCCCATCAGAGTTTGTCATACCTCTTGCCAAGTATGCTAAAGCAGTGTATCATACTCGAATCTCTGTTGGTATGAGGTTCCGGATGCTGTTTGAAACAGAAGAATCAAGTGTTCGTAGGTATATGGGCACAATTACTGGCATCAGTGATCTAGATCCTGTTTGTTGGCCAAATTCACACTGGCGGTCTGTGAAGGTTGGATGGGATGAATCTACTGCTGGAGAAAGGCAGCCCAGAGTTTCTCTATGGGAAATTGAACCTCTGACAACATTTCCTATGTATCCTTCTCCTTTCTCCCTTAGGCTAAAGCGGCCTTGGCCATCTGGACTACCTTCTCTCCCTGGTTTTCCAAATGTTGGTTTGACTATGAATTCTCCACTCTCATGGCTACGTGGTGACATGGGAGATCAAGGGATGCAGTCGCTTAATTTTCAGGGATTTGGTGCAACTCCGTTTATGCAACCAAGAATGGATGCTTCTATGTTAGGTTTGCAACCTGACATTCTGCAAACAATGACAGCACTAGATCCATCGAAACTTGCAAATCAATCCCTTATGCAGTTCCAACATAGTATTCCCAACAGTTCAGCGCCTTTGAGTCAGATTCAGATGTTGCAGCCTTCTCATTCACAGCATAATCTGATACAAGGCTTTTCTGAAAACCACTTAATATCTCAGGCGCAGATGCTTCAGCAGCAATTACAGCGCCGTCAAAACTTCAATGATCAACAGCAATTGCTACAGCCACAGCTTTAGCAGCACCAAGAAGTGAACTCGCAGTTTCAACATCAATAGCAAACTAAGACCATATCTGGTCTCTCTCAGATGGCTTCAGCCACACAGCCCCATCTTTCTCATTTGCAAGTCCTAAGTTCGACTGGTTCCCTGCAAACCTTTTCTGATATACTGGGTAACCATGTCAATGCATCTAGTAATTCTAATATGCAAAGTCTGTTGAGTTCATTTTCCCGTGATGGAGCATCTGCTGTCCTAAACATGCATGAAACTCACCCTCTAGTATCTTCAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g043620.2.1SL2.50ch07:57561551..57566695526-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g043620.2SL2.50ch07:57561281..575666955,415-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g043620.2.1.1SL2.50ch07:57566653..5756669543-2
exonexon:Solyc07g043620.2.1.10SL2.50ch07:57562360..5756243576-n/a
exonexon:Solyc07g043620.2.1.11SL2.50ch07:57562060..57562207148-2
exonexon:Solyc07g043620.2.1.12SL2.50ch07:57561281..57561964684-n/a
exonexon:Solyc07g043620.2.1.2SL2.50ch07:57566438..57566556119-n/a
exonexon:Solyc07g043620.2.1.3SL2.50ch07:57566062..5756616099-n/a
exonexon:Solyc07g043620.2.1.4SL2.50ch07:57565927..5756598357-n/a
exonexon:Solyc07g043620.2.1.5SL2.50ch07:57565698..57565856159-n/a
exonexon:Solyc07g043620.2.1.6SL2.50ch07:57565451..5756553585-2
exonexon:Solyc07g043620.2.1.7SL2.50ch07:57564439..5756452991-1
exonexon:Solyc07g043620.2.1.8SL2.50ch07:57563851..57564015165-1
exonexon:Solyc07g043620.2.1.9SL2.50ch07:57563654..57563776123-1
intronintron:Solyc07g043620.2.1.10SL2.50ch07:57562436..57563653n/a-n/a
intronintron:Solyc07g043620.2.1.11SL2.50ch07:57562208..57562359n/a-n/a
intronintron:Solyc07g043620.2.1.12SL2.50ch07:57561965..57562059n/a-n/a
intronintron:Solyc07g043620.2.1.2SL2.50ch07:57566557..57566652n/a-n/a
intronintron:Solyc07g043620.2.1.3SL2.50ch07:57566161..57566437n/a-n/a
intronintron:Solyc07g043620.2.1.4SL2.50ch07:57565984..57566061n/a-n/a
intronintron:Solyc07g043620.2.1.5SL2.50ch07:57565857..57565926n/a-n/a
intronintron:Solyc07g043620.2.1.6SL2.50ch07:57565536..57565697n/a-n/a
intronintron:Solyc07g043620.2.1.7SL2.50ch07:57564530..57565450n/a-n/a
intronintron:Solyc07g043620.2.1.8SL2.50ch07:57564016..57564438n/a-n/a
intronintron:Solyc07g043620.2.1.9SL2.50ch07:57563777..57563850n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17878672%2Fdetails feature 17878672
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