Solanum lycopersicum mRNA Solyc07g040690.2.1

mRNA details  
Name
Solyc07g040690.2.1
Type
mRNA
Length
2,271
Organism
Solanum lycopersicum
Description
NPR1 protein (Fragment) (AHRD V1 ***- A8KRW4_CAPCH); contains Interpro domain(s) IPR002110 Ankyrin
Location(s)
SL2.50ch07:49383489..49399044
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005515
Length
15556
Nb exon
4
Sifter term
  • GO:0005515
  • GO:0016563
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g040690.2.1 NPR1 protein (Fragment) (AHRD V1 ***- A8KRW4_CAPCH); contains Interpro domain(s) IPR002110 Ankyrin

AAGAGCTCCCTTTGTTCTTCCATTTGACTTTTCTGTAGCAAAACAAACAAGACTTGTTTTCACATAGAGAAGAATGGCAAACTTTGTGTTTTTTGTTTTACAATACCTCCATTTCCATTGCTTCCTCCTCTTCTTCTCTGTCCCTTTTCCTCCCCCAATTCATCATATAATTCCTAACTAGCTAACAACCCCTTGTTCAATTTCTTTTCTCTCCCCAAATTCAATGGCTCTTTCTTCCAAATGATCCCTCTATTCCATTCCCCCTTTCTCCCATGAACGTATGCTCTAATGGATAGTAGAACTGCTTTTTCGGATTCCAATGATATTAGTGGAAGCAGTAGTATATGCTGCATGAACGAATCGGAAACTTCACTGGCAGACGTCAATTCCCTCAAACGTCTATCAGAAACACTAGAGTCTATCTTCGATGCGTCTGCGCCGGATTTCGACTTCTTCGCTGATGCTAAGCTTCTGGCTCCAGGCGGTAAGGAAATTCCGGTGCATCGGTGCATTTTGTCGGCGAGGAGTCCTTTTTTTAAGAATGTATTCTGTGGGAAAGATAGCAACACGAAGCTGGAACTCAAAGAGCTGATGAAAGAGTATGAGGTGAGTTTTGATGCCGTGGTCAGTGTGCTCGCCTATTTGTATAGTGGAAAAGTTAGGCCTGCATCTAAAGATGTGTGTGTTTGTGTGGACAATGAGTGCTTGCATGTAGCTTGTAGGCCAGCTGTGGCCTTCATGGTTCAGGTTTTGTACGCATCCTTTACCTTTCAGATCTCTCAATTGGTCGACAAGTTTCAGAGACACCTATTGGATATTCTTGACAAAGCTGTAGCAGATGATGTAATGATGGTTTTATCCGTTGCAAACATTTGCGGTAAAGCATGTGAAAGATTACTTTCAAGATGCATTGATATTATTGTCAAGTCTAATGTTGATATCATAACCCTTGATAAGTCCTTGCCTCATGACATTGTAAAACAAATCACTGATTCACGTGCTGAACTTGGTCTGCAAGGGCCTGAAAGCAATGGTTTTCCTGATAAACATGTTAAGAGGATACATAGAGCATTGGACTCTGATGATGTTGAATTACTAAGGATGTTGCTTAAAGAGGGGCATACTACTCTTGATGATGCATATGCTCTCCACTATGCTGTAGCATATTGCGATGCAAAGACTACAGCAGAACTTTTAGATCTTTCACTTGCTGATGTTAATCATCAAAATCCTAGAGGACACACGGTACTTCATGTTGCTGCCATGAGGAAAGAACCTAAAATTATAGTGTCCCTTTTAACCAAAGGAGCTAGACCTTCTGATCTGACATCCGATGGCAAAAAAGCACTTCAAATTGCTAAGAGGCTCACTAGGCTTGTAGATTTTACCAAGTCTACAGAGGAAGGAAAATCTGCTCCAAAGGATCGGTTATGCATTGAGATTCTGGAGCAAGCAGAAAGAAGAGATCCACTACTAGGAGAAGCTTCATTATCTCTTGCTATGGCAGGCGATGATTTGCGTATGAAGCTGTTATACCTTGAAAATAGAGTTGGTCTGGCTAAACTCCTTTTTCCCATGGAAGCAAAAGTTGCAATGGACATTGCACAAGTTGATGGCACGTCTGAATTACCCCTGGCTAGCATGAGGAAGAAGATAGCTGATGCACAGAGGACAACAGTGGATTTGAACGAGGCTCCTTTCAAGATGAAAGAGGAGCACTTGAATCGGCTTAGGGCTCTCTCTAGAACTGTGGAACTTGGAAAACGGTTCTTTCCACGTTGTTCAGAAGTTCTAAATAAGATCATGGATGCTGATGACTTGTCTGAGATAGCTTACATGGGGAATGATACAGTAGAAGAGCGTCAACTGAAGAAGCAAAGGTACATGGAACTTCAAGAAATTTTGTCTAAAGCATTCACGGAGGATAAAGAAGAATTTGCTAAGACTAACATGTCCTCATCTTGTTCCTCTACATCTAAGGGAGTAGATAAGCCCAATAATCTCCCATTTAGGAAATAGATTTTGTATTAGGACATATGAGGAAGAAACACAGGACTCTCTTTCTTTTTCATCATTTGATGCATACAAAACACATGTACCATAAACTTGTATTGTGAAAAAAAGATAAAATTTCATTATTAGTTGAGAAGCAATCATTTGAAAGTGAAAAAAAACAAAATGGCCCACCTAGAAGATAAGATATGTAACAATTGTTAATAGTATTATTATTATTATTATTATGAGTTAAATGACTAATAATTGTGGATTTTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g040690.2.1SL2.50ch07:49383740..49398756577-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g040690.2SL2.50ch07:49383489..4939904415,556-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g040690.2.1.1SL2.50ch07:49398244..49399044801-n/a
exonexon:Solyc07g040690.2.1.2SL2.50ch07:49388344..49389091748-2
exonexon:Solyc07g040690.2.1.3SL2.50ch07:49384417..49384617201-2
exonexon:Solyc07g040690.2.1.4SL2.50ch07:49383489..49384009521-n/a
intronintron:Solyc07g040690.2.1.2SL2.50ch07:49389092..49398243n/a-n/a
intronintron:Solyc07g040690.2.1.3SL2.50ch07:49384618..49388343n/a-n/a
intronintron:Solyc07g040690.2.1.4SL2.50ch07:49384010..49384416n/a-n/a
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Related viewsNone found
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