Solanum lycopersicum mRNA Solyc07g016180.2.1
 mRNA details
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| Name | Type |
Length
4,035
|
Organism |
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Description
Auxin response factor 19 (AHRD V1 ***- D9IA29_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
|
|
Location(s)
SL2.50ch07:6386861..6394308
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005634
- GO:0006355
- GO:0046983
- Length
- 7448
- Nb exon
- 13
- Sifter term
- GO:0046983
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc07g016180.2.1 Auxin response factor 19 (AHRD V1 ***- D9IA29_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
AAGAGAAAGAGAAAAAGGGGCAAAAGCCATTTCCAAAGAGAAAAACAGAGCAAATTAGAGAGAGAAAAAGATAGTGTTTATGTGTTGTGTGCTCTGTGTCTGGTAAAAAAGGGGCCAATTTAAAGCTAAATTGCAGCATTTGGTCTCTCCAATTCTCTACACACACCTCTTTATTCACAAAACCCTTACTTTGTCTCCTTCACCCTTCTTATTTTCTCGTTTTCCGGTCACCGGAAAACGCACAATCGTCTTCCCGTCAGATCTAAAAGCTTAAAAAAAATGAATCTCCGGTGAAAATAATATCTGAAGTTTAATTTCAATTTTTTTTTGTTGATCGGAGAAAAGATAGAAAAATGAAAACACCGGTGAATACTGCCGGAGTTCAGCAGCAGCATACTGTTAACGGGAATCCTGGTGAAGTGGAGAAGAAAAGCATAAATCCAGAGCTATGGCAGGCCTGCGCCGGTCCTCTGGTGAACTTACCGGCAGCTGGGACCCACGTTGTTTATTTTCCACAAGGCCACAGTGAACAGGTTGCGGCATCTATGAAGAAAGATGTAGATGCCCAAATACCAAACTATCCAAACCTTCCATCAAAGTTAGTTTGTCTCCTTCACAATATTACCCTGCATGCGGATCCAGAAACAGATGAAGTTTATGCACAAATGACACTGCAGCCAGTTCCTTCATTTGATAAGGAGGCATTGTTGAGATCAGATTTGTCTATGAAAGCAAATAAACCACAAACAGAATTTTTTTGCAAGACCTTGACTGCCAGTGATACAAGCACACATGGGGGTTTTTCCGTCCCTCGACGTTCTGCAGAAAAAATATTCCCGCCTCTGGATTACTCAATGCAACCACCTGCTCAAGAACTTGTGGCTAGAGACTTGCATGATAATTTGTGGACCTTCCGCCATATTTATCGCGGGCAACCCAAACGCCATTTGCTAACGACAGGGTGGAGCCTCTTTGTCAGTGGGAAGAGGCTCTTTGCTGGTGACTCAGTTTTGTTTATCAGGGATGAAAAACAGCAGCTTCTACTTGGAATTAGGCGGGCAAACAGACAGCCAACCAACTTATCATCATCGGTGTTGTCAAGTGACAGCATGCATATTGGTATCCTAGCAGCTGCTGCCCATGCAGCTGCAAACAACAGCCCATTCACTGTGTTTTATAACCCAAGGGCAAGTCCTTCAGAATTTGTCATCCCTTTAGCCAAGTATTACAAGGCAACTTATAGCAGTCAAGTATCACTTGGCATGCGATTCCGCATGATGTTTGAGACAGAAGAATCAGGAACTAGAAGGTATATGGGCACAATTACTGGCATCAGTGATCTTGATCCAGTGAGGTGGAAGAACTCACAGTGGCGCAACTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGGGAGAGGCGTAACCGAGTCTCAATTTGGGAGATTGAACCAGTAACAGCACCGTTTTTCATCTGTCCTACTCCACCGTTCTTTAGATCAAAGCGGCCAAGGCTACCTGGAATGCCAGATGATGATTGTTCTGATCTGGATGGCCTGTTTAAGAGGACAATGCCATGGCTCGGTGATGACTTTGGCATGAAGGATCCGCAAGGTCTTCCAGGCCTGAGCTTAGTCCAATGGATGAACATGCAACAGAATCCTTCTTTGGCTAACTCAATGCAACCGAACTACCTGCATTCTTTGTCTGGTTCCGTGCTACAGAATGTAGGAGGTGGAGCAGACCTCTCGCGTCAGTTATGTCTACCAGCACCTCAGCTTCCTCAGCAGAATACTTTGCAGTTTGGTTCCCAAAGGCCAACCCAACAGGTTCAGCAGCTCGACCAGCTTCAGAAGATACCAACTACCACATTGAGTCCAGCAGGTTCCATTATGCAGCCGCAGCAACAGTTGTCGGATATCAGTCAGCAACCAAGACAGAACCTAATTAACCAATCAGTACCTACAAACCATGTTCAGGCCCAGCTTTTGCAAGCTCAAAGTCTTGTGCAATCTCAGAATGTCCTACAGCAACAACAATCATTTCAAAATCAGCTGCAAAGGAATCTTCCTCAGAACCTGCCGCAGCAGCAACAGATTATGAATCAAACTCAGCAGCAAAGTTTCATGCAACCCCAGCCGAGTGATCCACTTAACCAACAGCTGCATTTCTCTGATAACCAATTACAGATGCAGCTTTTGCAGAAGCTGCAGCAGCAGTCACTTCTAGCTCAACAATCTTTACTGCAACAACCGTCCCAGCTTATGCCAATCCAAGATCAGCAGAAGCACTTAGATGTATCACAGAACTTTTCTAGGTCACTTGCAACAAGCCAGATGCTAGATATGTCTCAAACCACGTCCAACTCCACGTCTCTTTCCCAGCCACAAGTTGCCCAGCAGCAAATGACGATAAATAATAGCCAGTCTAATCTTCGTTTTGCCCAGCCAAATCAGCATATGAAGCAACAGCAGCAGCAGCAGCAACCAGGAATTCTACCAGAAATACCTGGACAAGTTGGCCAGATTCTACCACCAACAACTAATCAGCTTTCGGCAAACTGCAGTAGCTTCTTAACAGGAGCTGTAGGTGGAGGCCAGTCGGTGGTTACGGATGATATTCCATCATGTTCCACCTCACCATCTACCAACAACTGTCAAAATGTAGTTCAGCCAATTATGAATGGTAGGATCCATCGAGGCACAGCTGCAGCGGAGGAAACAACCCAGTCTTCTCTACCCCTTTTGAGTTCCAGTGGATTAGAAGCCATGTCCCCTAATAGAAATCTAGTTAAAGATTTGCAGCAAAAACCTGATGTGAAGCCCTCAATGAATATCTCCAAGAGCCAGAATCATGGGTTTTCAACTCCTCAAACATACCTTAATAATGCAGTTCCCCAGATGGATTATTTGGATAGTTCATCTTCAGCAACCTCTGTCTACTTTTCTCAAAATGATGTCCAATTGCAGCAGACGACTAACCCGATGTCATTCAGTTCTCAAGCGATCGTATTTAGAGATAGTCAAGATGGAGAAGTTCAAGGTGACCCCAGACATAGTGTTGCTTTTGGAGCAAACATGGACAATCAGTTAGGAATATCCATGATGCCTGATTCTTTGATCACAAATAGCTTGGTGGGGTCAAGGAAAGATGTATCAAATAATATCTCATCAGGTGGAGGCATGCTTTCCAGCTATGAGAATCCCAAGGATGCACAGCCTGAACTATCATCCTCAATGGTCTCCCAATCATTTGGAGTTCCTGATATGGCCTTCAATTCAATTGATTCTACCATAAATGAAGGCAGCTTCATGAATAGAGGTGCCTGGGCCCCACCACCTCAAATGCCTCGAATGCGGACGTTTACCAAGGTACACAAGCGTGGTGCTGTTGGAAGATCAATCGACATCGCACGTTACTCAGGCTATGAAGAGCTTAAACAAGATTTAGCTCGTAGATTTGGTATAGAGGGACAACTGGAGGATAGACAAAGAATAGGATGGAAGCTTGTATATGTGGATCATGAGAATGACGTACTGCTTGTTGGCGATGATCCTTGGGAGGAATTCGTGAACTGTGTCCGTTGCATCAAGATTCTTTCTCCACAAGAGGTCCAACAAATTAGCTTGGATGGAGATTTTGGGAATAATGTCCAAAATCAAGCTTGTAGTAGTTCAGACGGAGGAAATGTGTAATTTAAATGGCTTAAGTTCCATTTTTACAAACCTCCCACGGTTGGTTAATTCTTCCCCTTATACACGCGTAATCAGCTCTTCCATGGTTGAAAAGAGCTGTCGCTAATATCTGACTGGAACTAAGCGGGAAGTGGGTGTGCTTCATCACCTCACCGGTCCAAGTATGGTAGCTCGTGTTACAAGGGGAGAGAACTGGTCAAGCTTAGGTAACCATAGAAGCACTAGATGCATACTACAAGAGTACTTAAATTTTCTTGTTTCCTTTGCATGAAAAGTTTCTTAAGAGTATTTTCACTGTAAAATTAAAATCCTTGAAATATGTATGTAGTGTTGGAATGTATAG
AAGAGAAAGAGAAAAAGGGGCAAAAGCCATTTCCAAAGAGAAAAACAGAGCAAATTAGAGAGAGAAAAAGATAGTGTTTATGTGTTGTGTGCTCTGTGTCTGGTAAAAAAGGGGCCAATTTAAAGCTAAATTGCAGCATTTGGTCTCTCCAATTCTCTACACACACCTCTTTATTCACAAAACCCTTACTTTGTCTCCTTCACCCTTCTTATTTTCTCGTTTTCCGGTCACCGGAAAACGCACAATCGTCTTCCCGTCAGATCTAAAAGCTTAAAAAAAATGAATCTCCGGTGAAAATAATATCTGAAGTTTAATTTCAATTTTTTTTTGTTGATCGGAGAAAAGATAGAAAAATGAAAACACCGGTGAATACTGCCGGAGTTCAGCAGCAGCATACTGTTAACGGGAATCCTGGTGAAGTGGAGAAGAAAAGCATAAATCCAGAGCTATGGCAGGCCTGCGCCGGTCCTCTGGTGAACTTACCGGCAGCTGGGACCCACGTTGTTTATTTTCCACAAGGCCACAGTGAACAGGTTGCGGCATCTATGAAGAAAGATGTAGATGCCCAAATACCAAACTATCCAAACCTTCCATCAAAGTTAGTTTGTCTCCTTCACAATATTACCCTGCATGCGGATCCAGAAACAGATGAAGTTTATGCACAAATGACACTGCAGCCAGTTCCTTCATTTGATAAGGAGGCATTGTTGAGATCAGATTTGTCTATGAAAGCAAATAAACCACAAACAGAATTTTTTTGCAAGACCTTGACTGCCAGTGATACAAGCACACATGGGGGTTTTTCCGTCCCTCGACGTTCTGCAGAAAAAATATTCCCGCCTCTGGATTACTCAATGCAACCACCTGCTCAAGAACTTGTGGCTAGAGACTTGCATGATAATTTGTGGACCTTCCGCCATATTTATCGCGGGCAACCCAAACGCCATTTGCTAACGACAGGGTGGAGCCTCTTTGTCAGTGGGAAGAGGCTCTTTGCTGGTGACTCAGTTTTGTTTATCAGGGATGAAAAACAGCAGCTTCTACTTGGAATTAGGCGGGCAAACAGACAGCCAACCAACTTATCATCATCGGTGTTGTCAAGTGACAGCATGCATATTGGTATCCTAGCAGCTGCTGCCCATGCAGCTGCAAACAACAGCCCATTCACTGTGTTTTATAACCCAAGGGCAAGTCCTTCAGAATTTGTCATCCCTTTAGCCAAGTATTACAAGGCAACTTATAGCAGTCAAGTATCACTTGGCATGCGATTCCGCATGATGTTTGAGACAGAAGAATCAGGAACTAGAAGGTATATGGGCACAATTACTGGCATCAGTGATCTTGATCCAGTGAGGTGGAAGAACTCACAGTGGCGCAACTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGGGAGAGGCGTAACCGAGTCTCAATTTGGGAGATTGAACCAGTAACAGCACCGTTTTTCATCTGTCCTACTCCACCGTTCTTTAGATCAAAGCGGCCAAGGCTACCTGGAATGCCAGATGATGATTGTTCTGATCTGGATGGCCTGTTTAAGAGGACAATGCCATGGCTCGGTGATGACTTTGGCATGAAGGATCCGCAAGGTCTTCCAGGCCTGAGCTTAGTCCAATGGATGAACATGCAACAGAATCCTTCTTTGGCTAACTCAATGCAACCGAACTACCTGCATTCTTTGTCTGGTTCCGTGCTACAGAATGTAGGAGGTGGAGCAGACCTCTCGCGTCAGTTATGTCTACCAGCACCTCAGCTTCCTCAGCAGAATACTTTGCAGTTTGGTTCCCAAAGGCCAACCCAACAGGTTCAGCAGCTCGACCAGCTTCAGAAGATACCAACTACCACATTGAGTCCAGCAGGTTCCATTATGCAGCCGCAGCAACAGTTGTCGGATATCAGTCAGCAACCAAGACAGAACCTAATTAACCAATCAGTACCTACAAACCATGTTCAGGCCCAGCTTTTGCAAGCTCAAAGTCTTGTGCAATCTCAGAATGTCCTACAGCAACAACAATCATTTCAAAATCAGCTGCAAAGGAATCTTCCTCAGAACCTGCCGCAGCAGCAACAGATTATGAATCAAACTCAGCAGCAAAGTTTCATGCAACCCCAGCCGAGTGATCCACTTAACCAACAGCTGCATTTCTCTGATAACCAATTACAGATGCAGCTTTTGCAGAAGCTGCAGCAGCAGTCACTTCTAGCTCAACAATCTTTACTGCAACAACCGTCCCAGCTTATGCCAATCCAAGATCAGCAGAAGCACTTAGATGTATCACAGAACTTTTCTAGGTCACTTGCAACAAGCCAGATGCTAGATATGTCTCAAACCACGTCCAACTCCACGTCTCTTTCCCAGCCACAAGTTGCCCAGCAGCAAATGACGATAAATAATAGCCAGTCTAATCTTCGTTTTGCCCAGCCAAATCAGCATATGAAGCAACAGCAGCAGCAGCAGCAACCAGGAATTCTACCAGAAATACCTGGACAAGTTGGCCAGATTCTACCACCAACAACTAATCAGCTTTCGGCAAACTGCAGTAGCTTCTTAACAGGAGCTGTAGGTGGAGGCCAGTCGGTGGTTACGGATGATATTCCATCATGTTCCACCTCACCATCTACCAACAACTGTCAAAATGTAGTTCAGCCAATTATGAATGGTAGGATCCATCGAGGCACAGCTGCAGCGGAGGAAACAACCCAGTCTTCTCTACCCCTTTTGAGTTCCAGTGGATTAGAAGCCATGTCCCCTAATAGAAATCTAGTTAAAGATTTGCAGCAAAAACCTGATGTGAAGCCCTCAATGAATATCTCCAAGAGCCAGAATCATGGGTTTTCAACTCCTCAAACATACCTTAATAATGCAGTTCCCCAGATGGATTATTTGGATAGTTCATCTTCAGCAACCTCTGTCTACTTTTCTCAAAATGATGTCCAATTGCAGCAGACGACTAACCCGATGTCATTCAGTTCTCAAGCGATCGTATTTAGAGATAGTCAAGATGGAGAAGTTCAAGGTGACCCCAGACATAGTGTTGCTTTTGGAGCAAACATGGACAATCAGTTAGGAATATCCATGATGCCTGATTCTTTGATCACAAATAGCTTGGTGGGGTCAAGGAAAGATGTATCAAATAATATCTCATCAGGTGGAGGCATGCTTTCCAGCTATGAGAATCCCAAGGATGCACAGCCTGAACTATCATCCTCAATGGTCTCCCAATCATTTGGAGTTCCTGATATGGCCTTCAATTCAATTGATTCTACCATAAATGAAGGCAGCTTCATGAATAGAGGTGCCTGGGCCCCACCACCTCAAATGCCTCGAATGCGGACGTTTACCAAGGTACACAAGCGTGGTGCTGTTGGAAGATCAATCGACATCGCACGTTACTCAGGCTATGAAGAGCTTAAACAAGATTTAGCTCGTAGATTTGGTATAGAGGGACAACTGGAGGATAGACAAAGAATAGGATGGAAGCTTGTATATGTGGATCATGAGAATGACGTACTGCTTGTTGGCGATGATCCTTGGGAGGAATTCGTGAACTGTGTCCGTTGCATCAAGATTCTTTCTCCACAAGAGGTCCAACAAATTAGCTTGGATGGAGATTTTGGGAATAATGTCCAAAATCAAGCTTGTAGTAGTTCAGACGGAGGAAATGTGTAATTTAAATGGCTTAAGTTCCATTTTTACAAACCTCCCACGGTTGGTTAATTCTTCCCCTTATACACGCGTAATCAGCTCTTCCATGGTTGAAAAGAGCTGTCGCTAATATCTGACTGGAACTAAGCGGGAAGTGGGTGTGCTTCATCACCTCACCGGTCCAAGTATGGTAGCTCGTGTTACAAGGGGAGAGAACTGGTCAAGCTTAGGTAACCATAGAAGCACTAGATGCATACTACAAGAGTACTTAAATTTTCTTGTTTCCTTTGCATGAAAAGTTTCTTAAGAGTATTTTCACTGTAAAATTAAAATCCTTGAAATATGTATGTAGTGTTGGAATGTATAG
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc07g016180.2.1 | SL2.50ch07:6387203..6393955 | 1,113 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc07g016180.2 | SL2.50ch07:6386861..6394308 | 7,448 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc07g016180.2.1.1 | SL2.50ch07:6393889..6394308 | 420 | - | 2 |
| exon | exon:Solyc07g016180.2.1.10 | SL2.50ch07:6390182..6390323 | 142 | - | 2 |
| exon | exon:Solyc07g016180.2.1.11 | SL2.50ch07:6387906..6389746 | 1,841 | - | n/a |
| exon | exon:Solyc07g016180.2.1.12 | SL2.50ch07:6387617..6387807 | 191 | - | 1 |
| exon | exon:Solyc07g016180.2.1.13 | SL2.50ch07:6386861..6387336 | 476 | - | n/a |
| exon | exon:Solyc07g016180.2.1.2 | SL2.50ch07:6393194..6393306 | 113 | - | n/a |
| exon | exon:Solyc07g016180.2.1.3 | SL2.50ch07:6391941..6392039 | 99 | - | n/a |
| exon | exon:Solyc07g016180.2.1.4 | SL2.50ch07:6391792..6391848 | 57 | - | n/a |
| exon | exon:Solyc07g016180.2.1.5 | SL2.50ch07:6391449..6391604 | 156 | - | n/a |
| exon | exon:Solyc07g016180.2.1.6 | SL2.50ch07:6391279..6391363 | 85 | - | 2 |
| exon | exon:Solyc07g016180.2.1.7 | SL2.50ch07:6391090..6391180 | 91 | - | 1 |
| exon | exon:Solyc07g016180.2.1.8 | SL2.50ch07:6390691..6390855 | 165 | - | 1 |
| exon | exon:Solyc07g016180.2.1.9 | SL2.50ch07:6390407..6390605 | 199 | - | n/a |
| intron | intron:Solyc07g016180.2.1.10 | SL2.50ch07:6390324..6390406 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.11 | SL2.50ch07:6389747..6390181 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.12 | SL2.50ch07:6387808..6387905 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.13 | SL2.50ch07:6387337..6387616 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.2 | SL2.50ch07:6393307..6393888 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.3 | SL2.50ch07:6392040..6393193 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.4 | SL2.50ch07:6391849..6391940 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.5 | SL2.50ch07:6391605..6391791 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.6 | SL2.50ch07:6391364..6391448 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.7 | SL2.50ch07:6391181..6391278 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.8 | SL2.50ch07:6390856..6391089 | n/a | - | n/a |
| intron | intron:Solyc07g016180.2.1.9 | SL2.50ch07:6390606..6390690 | n/a | - | n/a |
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