Solanum lycopersicum mRNA Solyc07g007890.2.1

mRNA details  
Name
Solyc07g007890.2.1
Type
mRNA
Length
3,195
Organism
Solanum lycopersicum
Description
CCR4-NOT transcription complex subunit 10 (AHRD V1 *-*- Q28FZ8_XENTR); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Location(s)
SL2.50ch07:2555369..2565293
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005488
Length
9925
Nb exon
6
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g007890.2.1 CCR4-NOT transcription complex subunit 10 (AHRD V1 *-*- Q28FZ8_XENTR); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical

GTAGTACCCCTGTGCTCTCTCTCTCTAGATTTTCTCTCTCTATCCGAATTCTTCCCCATTTTGGAAAAATCGCCCTTTGTTTCTCTCTCTAAAAATCGCTATCGATCGATACATATATATATATATGTAAGTCTGTTGTTCATCTTGGTGACTCTAGGGTTTTGGATATCGGAATTCAGATTTGAATTTGCGGCGCCGGATAACTGAGGGTTTTTGAATCGGTTCAGTTCGATTTTTTGCTTTCTTGGGTTGATTTTGTGGATCTGTGTGATCGGAAATGGATTCATCAGCGTCAAATGCAGTAGCGAATAACAAGGATGTTCCGTCTTCGATGACGCCGACCGCGGTGGAAGATGACGGCGCGATGTCTGTCAACTCAGGACTTGCAAAGGAGGCAGCTTTGTTTTTCCAGTCGGGGAATTATGCTGATTGTGTTAGAGTTTTGTATCAACTGTTGCAGAAAAAAGAAGGCGATCCAAAGGTTCTACATAACATTGCGATTGCTGTGAACTTTCAAGATGGTTGCTCCAATCCTAAGAAGCTGATTGATGAACTTAATAATGCTAAGAAAAGAAGCGAAGAGCTTGCTTGTGCTGCTGGGGACCAGGCAGATCCTGCTAGCAATGTTGGTGCCAAGGCTGTGACAGGAATTAGTGGAAATAACAGTGCACCACGACATCTATCCGCTCAACATAGTTCCGAACTTGTTTATGCTGATGAGTTTGATCCGTCAGTGACCACATACAATCTAGCAGTTTGCTGGTTTCATTTGCATGAACATGCAAAAGCATTTTCAATTTTGGAAGGATTGTTTCAGAACATTGAACCAATAGACGAGGAAATAGCCAAGCGCATTTGCCTATTACTGCTGGATGTTGCTTTACTTGCTCGAAATGCAGCAAGATCAGCTGATGTGATCAGCTACGTGGAGAAGGTCTTTTGTAGCAGTAGTTTATTGAGTCAAGTTGACAGCGGAAACTCTGCACTGCCAACAGCTTCAGCCGTTTTGAAATCGGCTTCATTTCCCAGCAATTCAACTATTCCTGATGCATCTACTCCAGATTCACCTGCTGCTGGGATAACCTCTGAAGGCTCTTTGTCTAGGACATTATCAGAAGAGGGACTTGAAGATCTGCATTTAATATCATCCATGGAGATTGGTGGGCAGAACCTACCACGACAGTCTGGCTTGAAATCTTCAAATGATCCAACAAGGAACCAAGCTGACGAGTTTATCTCAACTGCTGATATGAGGATTAAACTGCACCTTTGCAAGGTCCAATTTCTTCTCCTCACCAGGAATCTTAAGGCAGCTAAGCGTGAAGTTAAGATGGCTATGAACACAGCACGGGGCAAAGATCATTCTATGGCTCTCTATTTGAAGTCCCAGCTTGAATATACTCGTGGGAATCACCGAAAAGCAATCAAGCTCTTGATGGCATCAAGTAATCGGGCAGAAACGGGAATTTCTAGCTTATACTACAACAACCTGGGTTGCATATATTATCGACTTGGCAAGCATCACACTTCTTCTGTATTTTTTGCCAAGGCTCTGAGTAATAGTTCATCTCTCCGGAAAGAGCGACCTTTAAAGCTCTCAACCATCTCTCAGGACAAGTCTCTTCTCATAACCTATAACTGTGGTATGCAGTACCTGGCTTGTGGGAAACCATTGCTGGCTGCAAGCTGTTTCTATAAGGCTAGTCAGGTTTTCCACAGTAGGCCTCTTTTATGGTTACGAGTTGCAGAATGTTGTCTAATGGCACTTGAGCAGGGACTGCTCAAGTCCAGTGGTGTTGCTGCTTCTGACAGGTCTGAAGTTAAAGTACATGTTGTTGGACAAGGAAAATGGAGGCAACTTGTTATGGAAAATGGATTATTAAGAAATGGACAAGAAAGTTTTTCAGGTAAGGAAGATTTGGCTACTAAGGATAGACAACTGAAGCTATCGGTACAACTTGCTCGTCAGTGTCTTCTGAATGCTTTGCATTTATTGAACAGTTCTGAATCAAAAGGTAACAAGTCCACACAGTCTCATGTTTCTGGTGTGGAAGAAAGTGAAACAAGAGAAGTAGTACCATCCAAGCATGGATCAACTGAACCTAAGTCACTGAACGTGCCAGCATCTGGTCAGGTTAATGCAAATGGGGAGGTGAAAGAGCAAAAGGGTACAAGCAGTCAGAATGCCGCCTTCTTGAATTCTCTCGGCGAGTATGAAGCCACATGTAGAAAAGAGAACCTGATGATTGAGCAAGCTGCATTGGCTGATTTGGCTTTTGTAGAGCTGGAATTGGGAAATCCATTGAAGGCTCTTACAATTGCACGATCTCTCTTGAAAGTCCAAGAATGTTCTAGGATATACATCTTTCTTGGTAATGTGTATGCTGCTGAAGCTCTATGCTTGCTGAACCGGGCAAAGGAAGCTGCAGAGCATTTGTCAACCTTTATCTCCAGTGGCAAGGATGTTGATCTGCCATTTAGTGAAGAGGATTCTGAAATGTGGAGACAGGAGAAAACATTGGAATCGGAAGATACTAATGTTGGATCAGCTGCTGTGAATTCCTTTCCTTCTGAGGAATCTCAAGCATTTGTGTTTGTTAAGCCGGAGGAGGCCCGCGGAATTCTCTTCACAAACTTAGCTGCCATGGCTGCTATGCAAGGAGACATTGAACAGGCTCAAACTTATGTTATGCAAGCACTATCGACAAAACCTCAACGTCCTGAAGCTATTCTTACTGCAGTATACTTGGATCTTCTGTGCGGGAAGACACAAGAAGCTCTCACAAAGTTGAAACAGTGTAGTCGTATTAGGTTCCTACCAAGCAGTCCGACGTTAAGTGGTTCATCGTGATGATTCATATCCAGCCCACCTTTCAGGAATGAGTTAGCAGGCAGGTAGTTCAGGAATCCCTTGATAGAGTATATGTACCATATATATAGCTCAATTCAGGAACAAGTTTTTTCGTTTTTTTTCGTCTTTCAAATGTCTATGATTTGCTGGTTTAGGTTTTCAGGAAGTGATGGGGTGGGGTGGGGGGGTGTTTTGTGGCTGAGATTAGTTTGGTTGTTGCAGATACATGCCCATCTTTAAAAGACTCGAGGTGTATTTTTCATACAGAGAGGAGAGACCCCGTCTAGTTCCCCTTTTAGAGATATATAGAGGTTCTATGAACTCCTATGAAAGATGAAACCATG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g007890.2.1SL2.50ch07:2555712..2565016858-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g007890.2SL2.50ch07:2555369..25652939,925-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g007890.2.1.1SL2.50ch07:2564813..2565293481-n/a
exonexon:Solyc07g007890.2.1.2SL2.50ch07:2562656..256274287-n/a
exonexon:Solyc07g007890.2.1.3SL2.50ch07:2559946..2560128183-n/a
exonexon:Solyc07g007890.2.1.4SL2.50ch07:2559754..255984087-n/a
exonexon:Solyc07g007890.2.1.5SL2.50ch07:2559610..255968172-n/a
exonexon:Solyc07g007890.2.1.6SL2.50ch07:2555369..25576532,285-n/a
intronintron:Solyc07g007890.2.1.2SL2.50ch07:2562743..2564812n/a-n/a
intronintron:Solyc07g007890.2.1.3SL2.50ch07:2560129..2562655n/a-n/a
intronintron:Solyc07g007890.2.1.4SL2.50ch07:2559841..2559945n/a-n/a
intronintron:Solyc07g007890.2.1.5SL2.50ch07:2559682..2559753n/a-n/a
intronintron:Solyc07g007890.2.1.6SL2.50ch07:2557654..2559609n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17869165%2Fdetails feature 17869165
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