Solanum lycopersicum mRNA Solyc07g005760.2.1

mRNA details  
Name
Solyc07g005760.2.1
Type
mRNA
Length
1,645
Organism
Solanum lycopersicum
Description
Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase (AHRD V1 **-* B2Z6Q6_POPTR); contains Interpro domain(s) IPR003480 Transferase
Location(s)
SL2.50ch07:607977..611742
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016747
Length
3766
Nb exon
2
Sifter term
  • GO:0047205
  • GO:0047172
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g005760.2.1 Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase (AHRD V1 **-* B2Z6Q6_POPTR); contains Interpro domain(s) IPR003480 Transferase

CTTCCTTATCTCTTTAGCTCTTTCTCCCTTCACATTTCACAAATAATAATATTCCAAAAATACATATTTTTATTATTTTTAAAAACACCCTTCCCTCTCCTTGACCTAATTTTTTTTTTTACCTCTTTTGGAAATAAATGGGAAGTGAAAAAATGATGAAAATTAATATCAAAGAATCAACACTAGTGAAACCATCAAAACCAACACCAACAAAGAGAATTTGGAGTTCTAATTTGGATTTAATTGTTGGAAGAATTCATCTTTTGACTGTTTATTTTTATAAACCAAATGGATCTTCAAATTTTTTTGATAATAAAGTTATTAAAGAAGCATTAAGTAATGTTTTAGTTTCATTTTATCCAATGGCTGGAAGATTAGGTAGGGATGAACAAGGTAGAATTGAAGTTAATTGTAATGGTGAAGGTGTTTTGTTTGTTGAGGCTGAAAGTGATTCATGTGTTGATGATTTTGGTGATTTTACACCATCTTTGGAACTTAGAAAACTCATTCCAAGTGTTGAAACCTCTGGAGATATCTCAACTTTCCCACTAGTTATATTTCAGATTACTCGTTTCAAGTGTGGCGGAGTCGCTCTTGGTGGTGGAGTATTCCACACGTTATCCGATGGTCTCTCATCCATCCACTTCATCAACACGTGGTCGGACATCGCCCGTGGCCTCTCCGTCGCAGTCCCGCCGTTCATCGATCGGACGCTCCTCCGTGCAAGGGACCCACCGACATCTTCTTTCGAGCACGTTGAGTACCATCCTCCACCTACCCTAAACTCATCGAAAAATCGCGAGTCCAGTACCACGACCATGTTGAAATTCTCGAGTGAACAACTCGGGCTTCTTAAGTCCAAGTCCAAAAATGAGGGTAGCACCTATGAAATCCTCGCAGCCCATATTTGGCGATGCACGTGCAAGGCACGTGGATTGCCAGAGGATCAATTGACCAAATTACACGTGGCCACCGACGGAAGGTCAAGGCTTTGCCCTCCCTTGCCACCGGGTTACCTAGGAAACGTCGTGTTCACGGCAACCCCAATAGCTAAATCATGCGAACTTCAATCAGAGCCGTTGACAAATTCCGTCAAGAGAATTCACAACGAGTTGATCAAAATGGACGACAATTACCTAAGATCAGCACTGGATTACCTCGAATTACAACCTGATTTATCAACCCTAATTCGGGGCCCGGCTTACTTTGCTAGCCCTAACCTCAATATTAATAGTTGGACTAGGTTGCCTGTCCATGAGTGTGATTTTGGATGGGGTAGGCCAATTCATATGGGACCAGCTTGCATTTTATATGAAGGGACAATTTATATTATACCAAGTCCAAATTCTAAAGATAGGAACTTGCGTTTGGCTGTTTGTCTAGATGCTGGTCACATGTCACTATTTGAAAAATATTTATATGAATTATGAGATATTTTTCATATGAAAAAAAAAATCAAGAATGTACAACACAAATTGTGGTGTGATTTTGTTCAAGGCATTTTGTTTTGTTTTTTTTTTTATAATTCCAAATTCTTTATTAGGAATTTGATTTTGTATTTGTCAATGTCTTACTAAAGCTAAATTACTCCATATTTTCTTTGTGATTATACCTAGTTTTCAATTGATTGACTATAGTGGCAATT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g005760.2.1SL2.50ch07:608191..611605431-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g005760.2SL2.50ch07:607977..6117423,766-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g005760.2.1.1SL2.50ch07:611180..611742563-n/a
exonexon:Solyc07g005760.2.1.2SL2.50ch07:607977..6090581,082-n/a
intronintron:Solyc07g005760.2.1.2SL2.50ch07:609059..611179n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17866792%2Fdetails feature 17866792
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