Sol Genomics Network

Solanum lycopersicum gene Solyc06g082070.2

Name Solyc06g082070.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc06g082070	Length 2,998

Description

Os06g0207500 protein (Fragment) (AHRD V1 ***- Q0DDQ9_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant

Location(s)

SL2.50ch06:48008357..48011354

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2998

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc06g082070.2.1	SL2.50ch06:48008357..48011354	1,380	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc06g082070.2 SL2.50ch06:48008357..48011354
ATGGAGCTTCTCTCTTCATTATTATCTTGTTCTTCAACTACATTATGTCTTCTTCTTTTGTTACAGTTTTATGTAGCTTTATCTGTTATATTATTAAGGAATCACCATAATAATAACAATAATTATAATAACCCAAATCACAGAAACCCAATTCTTCAAGGAAATCAAACTTCATGTTCTCTCTTTATAGGTAGTTGGGTTTACGATGAAACTTACCCATTTTACCAATCAGCTTCTTGCCCCGCCGTCGATCCACAGTTCAACTGTCAACTCTACGGCCGACCCGATACGGAATACCTAAAGTATCGATGGAAACCGGCGAACTGTGAGCTACCCAGGTACTTGAAACTTGATTTTACACCTTCTTCAATGGAGTTTCGATTTTTGATTATTTTTTCGTTTTTTTCGCTTAATAGGTTTAATGGGCTTGAGTTTCTGTTGAAAATGAAAGGGAAAACAGTGATGTTTGTGGGTGATTCATTAGGCCGGGATCAGTGGGAGTCGTTGATTTGTATGATTTCAGCTGATGTACCTAAAGCTCAAACGCAGATGTCGAGGCTTTACCCTATTTCAACTTTCAAGTTCCTGGTATGCGCCTCGCTATTGCTTTCTTTTTTGTTTATGTTGATTTCACTTGTATTTTCACCAATGGTAATCGATTTTATGTGCTGCATTGTGAGGATTTAAGACCTATATACAAGCAAGCTCACATGTTGAGCCGGAGCTAGATTTTAGGGAACGGGTTCAGTAGAATCCAGTAATTTTGATTCAAACTCTAATAGCTGAGCTAGCTAGAGTGTAGCTTCGATTCCTGGCTCCGACTCTGCTCACACCACGAAATTTCGCAGTGTAGTAATTTTTTTAATGTGATTTGGTGCTAAAATTAAAGATGGTGTGATTGTTGCAGGATTACGGAGTTGCTATTTCATATTACAAAGCACCATATCTAGTGGACATAGACACTGTACAAGGCAAAAGAGTGCTAAAATTGGATGATATTAGAGGAAATGCTAATGCTTGGCATGATGTAGATGTATTATCTTTTAATACTGGTCATTGGTGGACTCACAAAGGTCCTCTTCAAGGGTATATTTTCCTTTCCCAAATTTATTCATCATGTAGATTTTTTTTTCACTTTGGACTTTGATTTTTCTGAACTATTTTAACATTGTAAAAACACTTCTACAAATTGATATAATCAAAGAGTTCACTCTCATGTTAGAAGCAATAACGATTTTCACAGAGTTTAAAATATGAATAAGTAAACATACAAACTAGCTAACAAGTTTTCAAACATCGGCTATATATACATCAAAATATTTTTAACTAGGTTCATCTCCACTCCTGAGTAAAAGCTATCTATATGCAATAATACAAAGGGACAAAGCTATAGTATTAGATCTTACATTTATATTTAAAAATTGTTATATGAGTATATAATTATATCCAGTAACTAAAATGGACTATGATTCAATAATAGATTCAATAAATGCAAAATTTTAAATTGCGTCTCCGCCTCTTAAATTTGAGATGAGGGTGAATTTGGTAATATGCAGGTGGGACAACGTAGAAGCAGGAGGGACAATGTATGAAGACATGGATCCACTAATTGCAATGGAAAAAGGGCTAAGAACGTGGGCAAGATGGGTTGATACCAATATTGACAGAAGTAGAACCAGACTCTTCTTTCAGGGCATTTCACCTACGCACTACAAGTATGTTGACTCTTTCTATAATACTATGCAACACTGAACATAAGCAGAGATGGAGTCAACATTTAAATTTTACGAATCCAAGTTCTAAAATGGTGATGTGAGTGCTTAGTATTGGGATCTCAAATACATAGTAAATTTTTTAAAACAAATATAAAATTAGATTAAAATTATTGAGCACGATCGAATCTCTATATAATCTTGGCCTGACGTGAGACTGGAGGTGTTCAGTTGATTTGTCAGGGTTATTAGTATGAGCAGTCGTTTATTGAATTTCTCTATTGGAACTCTACTGACCTTGTCCCCATTATCAGCTGTCATCGACTTATTATATGCTTTTATATTCCAACTTGGACCTAACAATATTCAATTATTGAGTTTTTTGCACTAGTATTTTTGTTTTAAATCTTACAATATCTCGATGTCAATTTTCATATTTGTGAAAATGATACTTTTTTAGTTTGTGTGATGCATTTTATTTAGAAAAAATAACTAAACTTACATTTGACATTTTAGTTCTAGTTAGAAGTTCTGTTCATAATCATATTAATACTAAGGCAAGTCTAATGTCATTGTTTTAAAGAAATAATTTCTTTCTTGAAATTTCGGTGTTACTCAAATCATGTGAGAAATAGTTAGTGTACTAATTATTTTTATTAATTATTCCTGTCACTTGTCTGCTGCCAAATAATTGAGAAACTCAACATATAATTGAATAATATAAAACTTATTTTCAATTTATTTTTGTTGGCAGTCCGAGTGAATGGAACGCGGGTGCATCAACAGGGAGTTGTTACGGGGAGACAATCCCCGTAACAACCACCCCTATGACGAGCACGTACCCGGGTCCCGATTTGGATCAATCAAATGTGATCCAAAAAGTTATAAGAGAAATGGACAATCCACCTTTCTTGCTAGACATAACATTGTTATCAACAATGAGGAAAGATGCACATCCATCTATTTACAGTGGTGATCTCAATTCTCAACAAAGAATTAACCCTAACAAACCTGATTGTAGCCATTGGTGTCTGCCTGGCCTGCCTGATACATGGAACCAACTATTTTACACTGTACTTTTCTACTAACTTATTATAGGACTAGCTAGCTTGTAGTAGTAATTTTTAGTTTTTTGCTAGCCCTATTGATGCAAATTCATTTTAGGTGACACACTAATGCAGCTAATTAATTAAGATGATTCTTAAATGAGTTTATATAGTAATTGAATCGGCATTGTAGATTTGTGCTGCTAATGAAAGGTATTATTTGCCCTGTTCGTTTTGTTA

Download sequence region

Download sequence (3.0Kb)

Get flanking sequences on SL2.50ch06

mRNA Solyc06g082070.2.1

Ontology terms

None

terms associated with this mRNA

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc06g082070.2.1	SL2.50ch06:48008356..48011156	394	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc06g082070.2	SL2.50ch06:48008357..48011354	2,998	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc06g082070.2.1.1	SL2.50ch06:48008357..48008694	338	+	n/a
exon	exon:Solyc06g082070.2.1.2	SL2.50ch06:48008773..48008944	172	+	1
exon	exon:Solyc06g082070.2.1.3	SL2.50ch06:48009264..48009442	179	+	n/a
exon	exon:Solyc06g082070.2.1.4	SL2.50ch06:48009913..48010071	159	+	1
exon	exon:Solyc06g082070.2.1.5	SL2.50ch06:48010823..48011354	532	+	1
intron	intron:Solyc06g082070.2.1.1	SL2.50ch06:48008695..48008772	n/a	+	n/a
intron	intron:Solyc06g082070.2.1.2	SL2.50ch06:48008945..48009263	n/a	+	n/a
intron	intron:Solyc06g082070.2.1.3	SL2.50ch06:48009443..48009912	n/a	+	n/a
intron	intron:Solyc06g082070.2.1.4	SL2.50ch06:48010072..48010822	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc06g082070

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17862706%2Fdetails feature 17862706

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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